Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC71LQ8N9Z2 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC71LQ8N9Z2 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
CCDC71LQ8N9Z2 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC21.22■□□□□ 0.99
CCDC71LQ8N9Z2 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC21.22■□□□□ 0.99
CCDC71LQ8N9Z2 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC71LQ8N9Z2 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC71LQ8N9Z2 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC71LQ8N9Z2 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC21.21■□□□□ 0.99
CCDC71LQ8N9Z2 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC71LQ8N9Z2 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC71LQ8N9Z2 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC21.2■□□□□ 0.98
CCDC71LQ8N9Z2 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC71LQ8N9Z2 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
CCDC71LQ8N9Z2 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC71LQ8N9Z2 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC71LQ8N9Z2 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC71LQ8N9Z2 LINC01003-201ENST00000564834 1764 ntBASIC21.19■□□□□ 0.98
CCDC71LQ8N9Z2 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC21.19■□□□□ 0.98
CCDC71LQ8N9Z2 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
CCDC71LQ8N9Z2 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC71LQ8N9Z2 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC71LQ8N9Z2 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC71LQ8N9Z2 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
CCDC71LQ8N9Z2 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC71LQ8N9Z2 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CCDC71LQ8N9Z2 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC21.17■□□□□ 0.98
CCDC71LQ8N9Z2 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC71LQ8N9Z2 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC71LQ8N9Z2 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
CCDC71LQ8N9Z2 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC71LQ8N9Z2 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC71LQ8N9Z2 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC71LQ8N9Z2 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.16■□□□□ 0.98
CCDC71LQ8N9Z2 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC21.15■□□□□ 0.98
CCDC71LQ8N9Z2 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
CCDC71LQ8N9Z2 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC71LQ8N9Z2 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC71LQ8N9Z2 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC71LQ8N9Z2 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC71LQ8N9Z2 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CCDC71LQ8N9Z2 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC21.14■□□□□ 0.97
CCDC71LQ8N9Z2 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC71LQ8N9Z2 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC71LQ8N9Z2 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC71LQ8N9Z2 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC71LQ8N9Z2 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC71LQ8N9Z2 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC71LQ8N9Z2 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC71LQ8N9Z2 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC71LQ8N9Z2 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC71LQ8N9Z2 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC71LQ8N9Z2 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC21.11■□□□□ 0.97
CCDC71LQ8N9Z2 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC21.11■□□□□ 0.97
CCDC71LQ8N9Z2 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC21.11■□□□□ 0.97
CCDC71LQ8N9Z2 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC71LQ8N9Z2 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC71LQ8N9Z2 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC71LQ8N9Z2 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC21.11■□□□□ 0.97
CCDC71LQ8N9Z2 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
CCDC71LQ8N9Z2 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC21.1■□□□□ 0.97
CCDC71LQ8N9Z2 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC71LQ8N9Z2 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC71LQ8N9Z2 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
CCDC71LQ8N9Z2 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC71LQ8N9Z2 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC71LQ8N9Z2 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.09■□□□□ 0.97
CCDC71LQ8N9Z2 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC71LQ8N9Z2 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC71LQ8N9Z2 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC21.08■□□□□ 0.97
CCDC71LQ8N9Z2 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
CCDC71LQ8N9Z2 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.97
CCDC71LQ8N9Z2 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC71LQ8N9Z2 AC127502.1-201ENST00000399971 1502 ntBASIC21.08■□□□□ 0.96
CCDC71LQ8N9Z2 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC21.07■□□□□ 0.96
CCDC71LQ8N9Z2 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
CCDC71LQ8N9Z2 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC71LQ8N9Z2 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
CCDC71LQ8N9Z2 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC21.06■□□□□ 0.96
CCDC71LQ8N9Z2 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC71LQ8N9Z2 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC71LQ8N9Z2 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
CCDC71LQ8N9Z2 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
CCDC71LQ8N9Z2 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC71LQ8N9Z2 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC71LQ8N9Z2 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC21.04■□□□□ 0.96
CCDC71LQ8N9Z2 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC71LQ8N9Z2 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC21.04■□□□□ 0.96
CCDC71LQ8N9Z2 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC21.04■□□□□ 0.96
CCDC71LQ8N9Z2 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC21.04■□□□□ 0.96
CCDC71LQ8N9Z2 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
CCDC71LQ8N9Z2 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC71LQ8N9Z2 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC71LQ8N9Z2 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC71LQ8N9Z2 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC71LQ8N9Z2 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC71LQ8N9Z2 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC71LQ8N9Z2 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC71LQ8N9Z2 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC71LQ8N9Z2 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms