Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 HLA-V-202ENST00000446817 847 ntBASIC26.19■■□□□ 1.78
PCDH20Q8N6Y1 MIR3648-2-201ENST00000581792 180 ntBASIC26.19■■□□□ 1.78
PCDH20Q8N6Y1 MIR3648-1-201ENST00000615959 180 ntBASIC26.19■■□□□ 1.78
PCDH20Q8N6Y1 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
PCDH20Q8N6Y1 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
PCDH20Q8N6Y1 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC26.18■■□□□ 1.78
PCDH20Q8N6Y1 CR559946.2-201ENST00000623684 991 ntBASIC26.18■■□□□ 1.78
PCDH20Q8N6Y1 GDI1-215ENST00000630693 786 ntTSL 4 BASIC26.18■■□□□ 1.78
PCDH20Q8N6Y1 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
PCDH20Q8N6Y1 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
PCDH20Q8N6Y1 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
PCDH20Q8N6Y1 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
PCDH20Q8N6Y1 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
PCDH20Q8N6Y1 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC26.17■■□□□ 1.78
PCDH20Q8N6Y1 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
PCDH20Q8N6Y1 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC26.17■■□□□ 1.78
PCDH20Q8N6Y1 MBP-237ENST00000579129 1052 ntTSL 5 BASIC26.17■■□□□ 1.78
PCDH20Q8N6Y1 CHML-204ENST00000638121 920 ntTSL 2 BASIC26.17■■□□□ 1.78
PCDH20Q8N6Y1 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
PCDH20Q8N6Y1 AC139426.1-201ENST00000568218 2529 ntBASIC26.16■■□□□ 1.78
PCDH20Q8N6Y1 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC26.16■■□□□ 1.78
PCDH20Q8N6Y1 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC26.16■■□□□ 1.78
PCDH20Q8N6Y1 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
PCDH20Q8N6Y1 WHAMMP2-203ENST00000563942 1603 ntBASIC26.15■■□□□ 1.78
PCDH20Q8N6Y1 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC26.15■■□□□ 1.78
PCDH20Q8N6Y1 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
PCDH20Q8N6Y1 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC26.14■■□□□ 1.78
PCDH20Q8N6Y1 AC016575.1-201ENST00000607026 382 ntBASIC26.14■■□□□ 1.78
PCDH20Q8N6Y1 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC26.14■■□□□ 1.78
PCDH20Q8N6Y1 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
PCDH20Q8N6Y1 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC26.13■■□□□ 1.77
PCDH20Q8N6Y1 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC26.13■■□□□ 1.77
PCDH20Q8N6Y1 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC26.13■■□□□ 1.77
PCDH20Q8N6Y1 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC26.13■■□□□ 1.77
PCDH20Q8N6Y1 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC26.12■■□□□ 1.77
PCDH20Q8N6Y1 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC26.12■■□□□ 1.77
PCDH20Q8N6Y1 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC26.12■■□□□ 1.77
PCDH20Q8N6Y1 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
PCDH20Q8N6Y1 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC26.11■■□□□ 1.77
PCDH20Q8N6Y1 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC26.1■■□□□ 1.77
PCDH20Q8N6Y1 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
PCDH20Q8N6Y1 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC26.1■■□□□ 1.77
PCDH20Q8N6Y1 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
PCDH20Q8N6Y1 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
PCDH20Q8N6Y1 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
PCDH20Q8N6Y1 MIR639-201ENST00000384974 98 ntBASIC26.09■■□□□ 1.77
PCDH20Q8N6Y1 RPS2-202ENST00000526522 924 ntTSL 2 BASIC26.09■■□□□ 1.77
PCDH20Q8N6Y1 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC26.09■■□□□ 1.77
PCDH20Q8N6Y1 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
PCDH20Q8N6Y1 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
PCDH20Q8N6Y1 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
PCDH20Q8N6Y1 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC26.08■■□□□ 1.77
PCDH20Q8N6Y1 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
PCDH20Q8N6Y1 AP004833.2-201ENST00000532228 1454 ntBASIC26.08■■□□□ 1.77
PCDH20Q8N6Y1 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
PCDH20Q8N6Y1 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC26.07■■□□□ 1.76
PCDH20Q8N6Y1 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
PCDH20Q8N6Y1 HES6-205ENST00000409356 528 ntTSL 2 BASIC26.06■■□□□ 1.76
PCDH20Q8N6Y1 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
PCDH20Q8N6Y1 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
PCDH20Q8N6Y1 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC26.05■■□□□ 1.76
PCDH20Q8N6Y1 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
PCDH20Q8N6Y1 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC26.05■■□□□ 1.76
PCDH20Q8N6Y1 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC26.05■■□□□ 1.76
PCDH20Q8N6Y1 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC26.05■■□□□ 1.76
PCDH20Q8N6Y1 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
PCDH20Q8N6Y1 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
PCDH20Q8N6Y1 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC26.03■■□□□ 1.76
PCDH20Q8N6Y1 MEST-211ENST00000437945 1455 ntTSL 5 BASIC26.03■■□□□ 1.76
PCDH20Q8N6Y1 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
PCDH20Q8N6Y1 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC26.03■■□□□ 1.76
PCDH20Q8N6Y1 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC26.02■■□□□ 1.76
PCDH20Q8N6Y1 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
PCDH20Q8N6Y1 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC26.02■■□□□ 1.76
PCDH20Q8N6Y1 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC26.01■■□□□ 1.75
PCDH20Q8N6Y1 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC26.01■■□□□ 1.75
PCDH20Q8N6Y1 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC26.01■■□□□ 1.75
PCDH20Q8N6Y1 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
PCDH20Q8N6Y1 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
PCDH20Q8N6Y1 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
PCDH20Q8N6Y1 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
PCDH20Q8N6Y1 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC26■■□□□ 1.75
PCDH20Q8N6Y1 CHST11-202ENST00000546689 756 ntTSL 2 BASIC26■■□□□ 1.75
PCDH20Q8N6Y1 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC26■■□□□ 1.75
PCDH20Q8N6Y1 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC25.99■■□□□ 1.75
PCDH20Q8N6Y1 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
PCDH20Q8N6Y1 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
PCDH20Q8N6Y1 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
PCDH20Q8N6Y1 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
PCDH20Q8N6Y1 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC25.98■■□□□ 1.75
PCDH20Q8N6Y1 MIR4449-201ENST00000578365 66 ntBASIC25.97■■□□□ 1.75
PCDH20Q8N6Y1 AL139393.2-201ENST00000608721 2025 ntBASIC25.97■■□□□ 1.75
PCDH20Q8N6Y1 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
PCDH20Q8N6Y1 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC25.96■■□□□ 1.75
PCDH20Q8N6Y1 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC25.96■■□□□ 1.75
PCDH20Q8N6Y1 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
PCDH20Q8N6Y1 METRNL-202ENST00000570778 967 ntTSL 5 BASIC25.94■■□□□ 1.74
PCDH20Q8N6Y1 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC25.94■■□□□ 1.74
PCDH20Q8N6Y1 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC25.92■■□□□ 1.74
PCDH20Q8N6Y1 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC25.92■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms