Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 PROC-203ENST00000409048 1586 ntTSL 5 BASIC26.31■■□□□ 1.8
CCDC25Q86WR0 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC26.31■■□□□ 1.8
CCDC25Q86WR0 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC26.31■■□□□ 1.8
CCDC25Q86WR0 AP004833.2-201ENST00000532228 1454 ntBASIC26.3■■□□□ 1.8
CCDC25Q86WR0 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CCDC25Q86WR0 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC26.3■■□□□ 1.8
CCDC25Q86WR0 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CCDC25Q86WR0 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
CCDC25Q86WR0 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC26.29■■□□□ 1.8
CCDC25Q86WR0 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CCDC25Q86WR0 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CCDC25Q86WR0 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC26.28■■□□□ 1.8
CCDC25Q86WR0 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC26.28■■□□□ 1.8
CCDC25Q86WR0 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC26.28■■□□□ 1.8
CCDC25Q86WR0 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CCDC25Q86WR0 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC26.27■■□□□ 1.8
CCDC25Q86WR0 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CCDC25Q86WR0 AC127502.1-201ENST00000399971 1502 ntBASIC26.26■■□□□ 1.79
CCDC25Q86WR0 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CCDC25Q86WR0 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CCDC25Q86WR0 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC26.25■■□□□ 1.79
CCDC25Q86WR0 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CCDC25Q86WR0 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CCDC25Q86WR0 RARRES2P7-201ENST00000567349 469 ntBASIC26.25■■□□□ 1.79
CCDC25Q86WR0 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
CCDC25Q86WR0 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CCDC25Q86WR0 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
CCDC25Q86WR0 SHF-207ENST00000560540 2062 ntTSL 5 BASIC26.24■■□□□ 1.79
CCDC25Q86WR0 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CCDC25Q86WR0 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
CCDC25Q86WR0 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CCDC25Q86WR0 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
CCDC25Q86WR0 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC26.24■■□□□ 1.79
CCDC25Q86WR0 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC26.23■■□□□ 1.79
CCDC25Q86WR0 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CCDC25Q86WR0 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
CCDC25Q86WR0 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CCDC25Q86WR0 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CCDC25Q86WR0 SETD8P1-201ENST00000623146 1180 ntBASIC26.22■■□□□ 1.79
CCDC25Q86WR0 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CCDC25Q86WR0 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CCDC25Q86WR0 LINC01003-201ENST00000564834 1764 ntBASIC26.21■■□□□ 1.79
CCDC25Q86WR0 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CCDC25Q86WR0 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC26.21■■□□□ 1.79
CCDC25Q86WR0 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC26.21■■□□□ 1.79
CCDC25Q86WR0 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
CCDC25Q86WR0 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC26.2■■□□□ 1.79
CCDC25Q86WR0 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
CCDC25Q86WR0 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
CCDC25Q86WR0 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
CCDC25Q86WR0 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC26.19■■□□□ 1.78
CCDC25Q86WR0 SHF-208ENST00000560734 1731 ntTSL 3 BASIC26.19■■□□□ 1.78
CCDC25Q86WR0 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC26.18■■□□□ 1.78
CCDC25Q86WR0 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC26.18■■□□□ 1.78
CCDC25Q86WR0 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
CCDC25Q86WR0 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC26.17■■□□□ 1.78
CCDC25Q86WR0 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CCDC25Q86WR0 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
CCDC25Q86WR0 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CCDC25Q86WR0 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC26.16■■□□□ 1.78
CCDC25Q86WR0 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC26.16■■□□□ 1.78
CCDC25Q86WR0 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CCDC25Q86WR0 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC26.16■■□□□ 1.78
CCDC25Q86WR0 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
CCDC25Q86WR0 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC26.15■■□□□ 1.78
CCDC25Q86WR0 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC26.15■■□□□ 1.78
CCDC25Q86WR0 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC26.15■■□□□ 1.78
CCDC25Q86WR0 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC26.15■■□□□ 1.78
CCDC25Q86WR0 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
CCDC25Q86WR0 AC100797.4-201ENST00000631653 1827 ntBASIC26.14■■□□□ 1.78
CCDC25Q86WR0 PKM-203ENST00000389093 2279 ntTSL 5 BASIC26.13■■□□□ 1.77
CCDC25Q86WR0 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC26.13■■□□□ 1.77
CCDC25Q86WR0 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC26.13■■□□□ 1.77
CCDC25Q86WR0 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CCDC25Q86WR0 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
CCDC25Q86WR0 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC26.12■■□□□ 1.77
CCDC25Q86WR0 DENR-202ENST00000455982 1052 ntTSL 5 BASIC26.11■■□□□ 1.77
CCDC25Q86WR0 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC26.11■■□□□ 1.77
CCDC25Q86WR0 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
CCDC25Q86WR0 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
CCDC25Q86WR0 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
CCDC25Q86WR0 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC26.1■■□□□ 1.77
CCDC25Q86WR0 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
CCDC25Q86WR0 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC26.1■■□□□ 1.77
CCDC25Q86WR0 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC26.1■■□□□ 1.77
CCDC25Q86WR0 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.77
CCDC25Q86WR0 EBPL-202ENST00000378268 680 ntTSL 3 BASIC26.08■■□□□ 1.77
CCDC25Q86WR0 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC26.08■■□□□ 1.77
CCDC25Q86WR0 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
CCDC25Q86WR0 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.76
CCDC25Q86WR0 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC26.08■■□□□ 1.76
CCDC25Q86WR0 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CCDC25Q86WR0 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
CCDC25Q86WR0 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC26.07■■□□□ 1.76
CCDC25Q86WR0 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC26.07■■□□□ 1.76
CCDC25Q86WR0 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CCDC25Q86WR0 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC26.06■■□□□ 1.76
CCDC25Q86WR0 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
CCDC25Q86WR0 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CCDC25Q86WR0 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC26.06■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms