Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
LINC01554Q52M75 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC01554Q52M75 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC01554Q52M75 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC12.8□□□□□ -0.36
LINC01554Q52M75 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC01554Q52M75 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
LINC01554Q52M75 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
LINC01554Q52M75 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LINC01554Q52M75 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LINC01554Q52M75 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC01554Q52M75 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC12.79□□□□□ -0.36
LINC01554Q52M75 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC01554Q52M75 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01554Q52M75 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01554Q52M75 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
LINC01554Q52M75 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
LINC01554Q52M75 RNF165-205ENST00000588679 2904 ntBASIC12.77□□□□□ -0.36
LINC01554Q52M75 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
LINC01554Q52M75 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
LINC01554Q52M75 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC01554Q52M75 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC01554Q52M75 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LINC01554Q52M75 INO80B-203ENST00000409917 796 ntTSL 2 BASIC12.76□□□□□ -0.37
LINC01554Q52M75 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC01554Q52M75 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC01554Q52M75 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC01554Q52M75 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC01554Q52M75 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC01554Q52M75 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC01554Q52M75 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC01554Q52M75 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
LINC01554Q52M75 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC01554Q52M75 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC12.75□□□□□ -0.37
LINC01554Q52M75 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC01554Q52M75 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
LINC01554Q52M75 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC01554Q52M75 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC01554Q52M75 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC01554Q52M75 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC01554Q52M75 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC01554Q52M75 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LINC01554Q52M75 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC01554Q52M75 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC01554Q52M75 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LINC01554Q52M75 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC01554Q52M75 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC01554Q52M75 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC01554Q52M75 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LINC01554Q52M75 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC01554Q52M75 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC01554Q52M75 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC01554Q52M75 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC12.73□□□□□ -0.37
LINC01554Q52M75 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC01554Q52M75 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC01554Q52M75 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
LINC01554Q52M75 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC12.72□□□□□ -0.37
LINC01554Q52M75 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC01554Q52M75 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LINC01554Q52M75 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LINC01554Q52M75 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
LINC01554Q52M75 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC12.71□□□□□ -0.38
LINC01554Q52M75 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01554Q52M75 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC12.7□□□□□ -0.38
LINC01554Q52M75 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
LINC01554Q52M75 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01554Q52M75 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01554Q52M75 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01554Q52M75 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01554Q52M75 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01554Q52M75 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
LINC01554Q52M75 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01554Q52M75 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
LINC01554Q52M75 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01554Q52M75 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
LINC01554Q52M75 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC12.69□□□□□ -0.38
LINC01554Q52M75 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC01554Q52M75 AC138932.1-201ENST00000534164 6830 ntBASIC12.69□□□□□ -0.38
LINC01554Q52M75 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC01554Q52M75 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LINC01554Q52M75 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC01554Q52M75 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC12.69□□□□□ -0.38
LINC01554Q52M75 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC01554Q52M75 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LINC01554Q52M75 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LINC01554Q52M75 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC01554Q52M75 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC01554Q52M75 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC01554Q52M75 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
LINC01554Q52M75 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
LINC01554Q52M75 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC01554Q52M75 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC12.68□□□□□ -0.38
LINC01554Q52M75 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC12.68□□□□□ -0.38
LINC01554Q52M75 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC01554Q52M75 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LINC01554Q52M75 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC01554Q52M75 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC01554Q52M75 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
LINC01554Q52M75 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
LINC01554Q52M75 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC01554Q52M75 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms