Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
HIST1H3AP68431 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
HIST1H3AP68431 AC044849.2-201ENST00000606596 710 ntBASIC22.45■■□□□ 1.18
HIST1H3AP68431 LINC00273-201ENST00000539813 1452 ntBASIC22.45■■□□□ 1.18
HIST1H3AP68431 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
HIST1H3AP68431 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC22.45■■□□□ 1.18
HIST1H3AP68431 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
HIST1H3AP68431 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
HIST1H3AP68431 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
HIST1H3AP68431 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC22.44■■□□□ 1.18
HIST1H3AP68431 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
HIST1H3AP68431 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
HIST1H3AP68431 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC22.43■■□□□ 1.18
HIST1H3AP68431 AC100797.4-201ENST00000631653 1827 ntBASIC22.43■■□□□ 1.18
HIST1H3AP68431 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
HIST1H3AP68431 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC22.43■■□□□ 1.18
HIST1H3AP68431 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
HIST1H3AP68431 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC22.43■■□□□ 1.18
HIST1H3AP68431 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
HIST1H3AP68431 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
HIST1H3AP68431 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
HIST1H3AP68431 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC22.42■■□□□ 1.18
HIST1H3AP68431 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC22.42■■□□□ 1.18
HIST1H3AP68431 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC22.42■■□□□ 1.18
HIST1H3AP68431 MEST-211ENST00000437945 1455 ntTSL 5 BASIC22.41■■□□□ 1.18
HIST1H3AP68431 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
HIST1H3AP68431 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC22.41■■□□□ 1.18
HIST1H3AP68431 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
HIST1H3AP68431 WHAMMP2-203ENST00000563942 1603 ntBASIC22.4■■□□□ 1.18
HIST1H3AP68431 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC22.4■■□□□ 1.18
HIST1H3AP68431 CIB2-204ENST00000557846 934 ntTSL 3 BASIC22.4■■□□□ 1.18
HIST1H3AP68431 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
HIST1H3AP68431 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC22.4■■□□□ 1.18
HIST1H3AP68431 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
HIST1H3AP68431 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
HIST1H3AP68431 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
HIST1H3AP68431 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
HIST1H3AP68431 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
HIST1H3AP68431 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC22.38■■□□□ 1.17
HIST1H3AP68431 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
HIST1H3AP68431 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
HIST1H3AP68431 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
HIST1H3AP68431 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
HIST1H3AP68431 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
HIST1H3AP68431 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC22.37■■□□□ 1.17
HIST1H3AP68431 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
HIST1H3AP68431 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC22.36■■□□□ 1.17
HIST1H3AP68431 CALM3-209ENST00000597743 577 ntTSL 4 BASIC22.36■■□□□ 1.17
HIST1H3AP68431 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC22.35■■□□□ 1.17
HIST1H3AP68431 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
HIST1H3AP68431 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
HIST1H3AP68431 BOD1-206ENST00000480951 814 ntTSL 2 BASIC22.34■■□□□ 1.17
HIST1H3AP68431 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
HIST1H3AP68431 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC22.34■■□□□ 1.17
HIST1H3AP68431 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
HIST1H3AP68431 AP002414.2-202ENST00000590929 1450 ntBASIC22.34■■□□□ 1.17
HIST1H3AP68431 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
HIST1H3AP68431 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
HIST1H3AP68431 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
HIST1H3AP68431 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
HIST1H3AP68431 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC22.32■■□□□ 1.16
HIST1H3AP68431 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC22.31■■□□□ 1.16
HIST1H3AP68431 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC22.31■■□□□ 1.16
HIST1H3AP68431 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
HIST1H3AP68431 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC22.31■■□□□ 1.16
HIST1H3AP68431 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
HIST1H3AP68431 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
HIST1H3AP68431 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
HIST1H3AP68431 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
HIST1H3AP68431 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
HIST1H3AP68431 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
HIST1H3AP68431 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
HIST1H3AP68431 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
HIST1H3AP68431 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC22.29■■□□□ 1.16
HIST1H3AP68431 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC22.29■■□□□ 1.16
HIST1H3AP68431 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
HIST1H3AP68431 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC22.28■■□□□ 1.16
HIST1H3AP68431 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC22.27■■□□□ 1.16
HIST1H3AP68431 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
HIST1H3AP68431 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
HIST1H3AP68431 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
HIST1H3AP68431 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
HIST1H3AP68431 RPS2P35-201ENST00000443417 897 ntBASIC22.27■■□□□ 1.16
HIST1H3AP68431 BX255925.1-201ENST00000566954 1854 ntBASIC22.27■■□□□ 1.16
HIST1H3AP68431 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
HIST1H3AP68431 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC22.27■■□□□ 1.15
HIST1H3AP68431 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
HIST1H3AP68431 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
HIST1H3AP68431 AC021231.2-201ENST00000594613 730 ntBASIC22.26■■□□□ 1.15
HIST1H3AP68431 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
HIST1H3AP68431 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
HIST1H3AP68431 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
HIST1H3AP68431 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
HIST1H3AP68431 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
HIST1H3AP68431 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC22.24■■□□□ 1.15
HIST1H3AP68431 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
HIST1H3AP68431 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC22.24■■□□□ 1.15
HIST1H3AP68431 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
HIST1H3AP68431 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
HIST1H3AP68431 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms