Protein–RNA interactions for Protein: P46020

PHKA1, Phosphorylase b kinase regulatory subunit alpha, skeletal muscle isoform, humanhuman

Predictions only

Length 1,223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHKA1P46020 ST7-202ENST00000323984 2142 ntTSL 5 BASIC31.48■■■□□ 2.63
PHKA1P46020 ST7-207ENST00000393449 2127 ntTSL 5 BASIC31.48■■■□□ 2.63
PHKA1P46020 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC31.47■■■□□ 2.63
PHKA1P46020 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
PHKA1P46020 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC31.45■■■□□ 2.63
PHKA1P46020 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC31.45■■■□□ 2.63
PHKA1P46020 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC31.44■■■□□ 2.62
PHKA1P46020 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
PHKA1P46020 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
PHKA1P46020 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC31.43■■■□□ 2.62
PHKA1P46020 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC31.42■■■□□ 2.62
PHKA1P46020 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC31.42■■■□□ 2.62
PHKA1P46020 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC31.41■■■□□ 2.62
PHKA1P46020 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC31.4■■■□□ 2.62
PHKA1P46020 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC31.39■■■□□ 2.62
PHKA1P46020 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC31.39■■■□□ 2.62
PHKA1P46020 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC31.39■■■□□ 2.62
PHKA1P46020 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC31.39■■■□□ 2.62
PHKA1P46020 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC31.39■■■□□ 2.62
PHKA1P46020 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC31.39■■■□□ 2.62
PHKA1P46020 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC31.39■■■□□ 2.62
PHKA1P46020 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC31.38■■■□□ 2.61
PHKA1P46020 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
PHKA1P46020 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC31.37■■■□□ 2.61
PHKA1P46020 ABCB10P1-201ENST00000614297 2181 ntBASIC31.37■■■□□ 2.61
PHKA1P46020 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
PHKA1P46020 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
PHKA1P46020 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
PHKA1P46020 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
PHKA1P46020 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC31.36■■■□□ 2.61
PHKA1P46020 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
PHKA1P46020 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC31.35■■■□□ 2.61
PHKA1P46020 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
PHKA1P46020 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC31.33■■■□□ 2.61
PHKA1P46020 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
PHKA1P46020 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC31.33■■■□□ 2.61
PHKA1P46020 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
PHKA1P46020 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC31.33■■■□□ 2.61
PHKA1P46020 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
PHKA1P46020 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC31.32■■■□□ 2.6
PHKA1P46020 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC31.32■■■□□ 2.6
PHKA1P46020 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC31.32■■■□□ 2.6
PHKA1P46020 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
PHKA1P46020 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
PHKA1P46020 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC31.3■■■□□ 2.6
PHKA1P46020 AC110285.7-201ENST00000624417 1536 ntBASIC31.3■■■□□ 2.6
PHKA1P46020 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC31.3■■■□□ 2.6
PHKA1P46020 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC31.3■■■□□ 2.6
PHKA1P46020 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC31.29■■■□□ 2.6
PHKA1P46020 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
PHKA1P46020 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
PHKA1P46020 MEST-211ENST00000437945 1455 ntTSL 5 BASIC31.27■■■□□ 2.6
PHKA1P46020 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
PHKA1P46020 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
PHKA1P46020 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC31.27■■■□□ 2.6
PHKA1P46020 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC31.27■■■□□ 2.6
PHKA1P46020 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
PHKA1P46020 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC31.25■■■□□ 2.59
PHKA1P46020 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC31.25■■■□□ 2.59
PHKA1P46020 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC31.25■■■□□ 2.59
PHKA1P46020 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC31.25■■■□□ 2.59
PHKA1P46020 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC31.25■■■□□ 2.59
PHKA1P46020 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC31.24■■■□□ 2.59
PHKA1P46020 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC31.24■■■□□ 2.59
PHKA1P46020 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC31.24■■■□□ 2.59
PHKA1P46020 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC31.24■■■□□ 2.59
PHKA1P46020 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC31.24■■■□□ 2.59
PHKA1P46020 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
PHKA1P46020 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
PHKA1P46020 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
PHKA1P46020 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
PHKA1P46020 HSD17B1P1-201ENST00000590052 955 ntBASIC31.23■■■□□ 2.59
PHKA1P46020 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
PHKA1P46020 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
PHKA1P46020 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC31.23■■■□□ 2.59
PHKA1P46020 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC31.23■■■□□ 2.59
PHKA1P46020 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC31.23■■■□□ 2.59
PHKA1P46020 AP004833.2-201ENST00000532228 1454 ntBASIC31.22■■■□□ 2.59
PHKA1P46020 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC31.22■■■□□ 2.59
PHKA1P46020 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC31.22■■■□□ 2.59
PHKA1P46020 SRP68-213ENST00000629930 165 ntTSL 5 BASIC31.22■■■□□ 2.59
PHKA1P46020 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC31.22■■■□□ 2.59
PHKA1P46020 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC31.22■■■□□ 2.59
PHKA1P46020 AL139393.2-201ENST00000608721 2025 ntBASIC31.22■■■□□ 2.59
PHKA1P46020 ABHD17AP3-201ENST00000503096 1137 ntBASIC31.21■■■□□ 2.59
PHKA1P46020 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC31.21■■■□□ 2.59
PHKA1P46020 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC31.21■■■□□ 2.59
PHKA1P46020 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
PHKA1P46020 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC31.2■■■□□ 2.59
PHKA1P46020 PEX7-203ENST00000541292 945 ntTSL 5 BASIC31.2■■■□□ 2.59
PHKA1P46020 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC31.19■■■□□ 2.58
PHKA1P46020 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC31.19■■■□□ 2.58
PHKA1P46020 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
PHKA1P46020 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC31.19■■■□□ 2.58
PHKA1P46020 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
PHKA1P46020 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
PHKA1P46020 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC31.19■■■□□ 2.58
PHKA1P46020 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
PHKA1P46020 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
PHKA1P46020 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms