Protein–RNA interactions for Protein: A0A0B4J262

TRAV8-6, T-cell receptor alpha variable 8-6 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-6A0A0B4J262 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV8-6A0A0B4J262 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV8-6A0A0B4J262 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV8-6A0A0B4J262 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV8-6A0A0B4J262 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV8-6A0A0B4J262 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV8-6A0A0B4J262 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV8-6A0A0B4J262 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
TRAV8-6A0A0B4J262 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
TRAV8-6A0A0B4J262 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC18.54■□□□□ 0.56
TRAV8-6A0A0B4J262 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV8-6A0A0B4J262 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV8-6A0A0B4J262 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
TRAV8-6A0A0B4J262 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV8-6A0A0B4J262 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV8-6A0A0B4J262 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
TRAV8-6A0A0B4J262 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRAV8-6A0A0B4J262 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRAV8-6A0A0B4J262 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
TRAV8-6A0A0B4J262 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC18.52■□□□□ 0.55
TRAV8-6A0A0B4J262 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
TRAV8-6A0A0B4J262 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC18.52■□□□□ 0.55
TRAV8-6A0A0B4J262 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV8-6A0A0B4J262 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
TRAV8-6A0A0B4J262 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV8-6A0A0B4J262 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC18.5■□□□□ 0.55
TRAV8-6A0A0B4J262 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV8-6A0A0B4J262 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC18.5■□□□□ 0.55
TRAV8-6A0A0B4J262 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV8-6A0A0B4J262 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC18.49■□□□□ 0.55
TRAV8-6A0A0B4J262 AC136428.2-201ENST00000563187 214 ntBASIC18.49■□□□□ 0.55
TRAV8-6A0A0B4J262 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV8-6A0A0B4J262 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV8-6A0A0B4J262 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
TRAV8-6A0A0B4J262 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV8-6A0A0B4J262 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
TRAV8-6A0A0B4J262 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV8-6A0A0B4J262 EBPL-202ENST00000378268 680 ntTSL 3 BASIC18.48■□□□□ 0.55
TRAV8-6A0A0B4J262 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC18.48■□□□□ 0.55
TRAV8-6A0A0B4J262 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV8-6A0A0B4J262 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC18.48■□□□□ 0.55
TRAV8-6A0A0B4J262 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
TRAV8-6A0A0B4J262 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV8-6A0A0B4J262 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV8-6A0A0B4J262 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV8-6A0A0B4J262 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
TRAV8-6A0A0B4J262 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
TRAV8-6A0A0B4J262 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV8-6A0A0B4J262 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV8-6A0A0B4J262 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
TRAV8-6A0A0B4J262 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
TRAV8-6A0A0B4J262 AL391121.1-201ENST00000607967 1349 ntBASIC18.47■□□□□ 0.55
TRAV8-6A0A0B4J262 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV8-6A0A0B4J262 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC18.46■□□□□ 0.55
TRAV8-6A0A0B4J262 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC18.46■□□□□ 0.55
TRAV8-6A0A0B4J262 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV8-6A0A0B4J262 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC18.46■□□□□ 0.55
TRAV8-6A0A0B4J262 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV8-6A0A0B4J262 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
TRAV8-6A0A0B4J262 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC18.46■□□□□ 0.55
TRAV8-6A0A0B4J262 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC18.46■□□□□ 0.55
TRAV8-6A0A0B4J262 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
TRAV8-6A0A0B4J262 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
TRAV8-6A0A0B4J262 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV8-6A0A0B4J262 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV8-6A0A0B4J262 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV8-6A0A0B4J262 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC18.45■□□□□ 0.54
TRAV8-6A0A0B4J262 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC18.44■□□□□ 0.54
TRAV8-6A0A0B4J262 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC18.44■□□□□ 0.54
TRAV8-6A0A0B4J262 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
TRAV8-6A0A0B4J262 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV8-6A0A0B4J262 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV8-6A0A0B4J262 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV8-6A0A0B4J262 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV8-6A0A0B4J262 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV8-6A0A0B4J262 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV8-6A0A0B4J262 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV8-6A0A0B4J262 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV8-6A0A0B4J262 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV8-6A0A0B4J262 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC18.42■□□□□ 0.54
TRAV8-6A0A0B4J262 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC18.42■□□□□ 0.54
TRAV8-6A0A0B4J262 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC18.42■□□□□ 0.54
TRAV8-6A0A0B4J262 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV8-6A0A0B4J262 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV8-6A0A0B4J262 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV8-6A0A0B4J262 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV8-6A0A0B4J262 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC18.4■□□□□ 0.54
TRAV8-6A0A0B4J262 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC18.4■□□□□ 0.54
TRAV8-6A0A0B4J262 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC18.4■□□□□ 0.54
TRAV8-6A0A0B4J262 CAHM-201ENST00000604200 896 ntBASIC18.4■□□□□ 0.54
TRAV8-6A0A0B4J262 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
TRAV8-6A0A0B4J262 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV8-6A0A0B4J262 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
TRAV8-6A0A0B4J262 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV8-6A0A0B4J262 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV8-6A0A0B4J262 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV8-6A0A0B4J262 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV8-6A0A0B4J262 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV8-6A0A0B4J262 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
TRAV8-6A0A0B4J262 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms