Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
VCX3BQ9H321 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
VCX3BQ9H321 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
VCX3BQ9H321 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
VCX3BQ9H321 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VCX3BQ9H321 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
VCX3BQ9H321 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
VCX3BQ9H321 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
VCX3BQ9H321 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VCX3BQ9H321 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VCX3BQ9H321 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.6■□□□□ 0.57
VCX3BQ9H321 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.6■□□□□ 0.57
VCX3BQ9H321 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.6■□□□□ 0.57
VCX3BQ9H321 AC061975.6-201ENST00000579045 1553 ntBASIC18.6■□□□□ 0.57
VCX3BQ9H321 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
VCX3BQ9H321 KRT8P36-201ENST00000489121 1440 ntBASIC18.6■□□□□ 0.57
VCX3BQ9H321 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VCX3BQ9H321 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
VCX3BQ9H321 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.6■□□□□ 0.57
VCX3BQ9H321 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
VCX3BQ9H321 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VCX3BQ9H321 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VCX3BQ9H321 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.6■□□□□ 0.57
VCX3BQ9H321 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
VCX3BQ9H321 AL033527.3-201ENST00000566366 1196 ntBASIC18.6■□□□□ 0.57
VCX3BQ9H321 NTF6A-201ENST00000591175 560 ntBASIC18.6■□□□□ 0.57
VCX3BQ9H321 AC006333.2-201ENST00000607957 2099 ntBASIC18.6■□□□□ 0.57
VCX3BQ9H321 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VCX3BQ9H321 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
VCX3BQ9H321 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
VCX3BQ9H321 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VCX3BQ9H321 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
VCX3BQ9H321 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.6■□□□□ 0.57
VCX3BQ9H321 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VCX3BQ9H321 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
VCX3BQ9H321 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
VCX3BQ9H321 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VCX3BQ9H321 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
VCX3BQ9H321 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
VCX3BQ9H321 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
VCX3BQ9H321 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
VCX3BQ9H321 KRT8P33-201ENST00000508125 1423 ntBASIC18.59■□□□□ 0.57
VCX3BQ9H321 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.59■□□□□ 0.57
VCX3BQ9H321 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
VCX3BQ9H321 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
VCX3BQ9H321 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC18.59■□□□□ 0.57
VCX3BQ9H321 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC18.59■□□□□ 0.57
VCX3BQ9H321 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC18.59■□□□□ 0.57
VCX3BQ9H321 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC18.59■□□□□ 0.57
VCX3BQ9H321 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
VCX3BQ9H321 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
VCX3BQ9H321 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
VCX3BQ9H321 SYT6-210ENST00000641643 1587 ntBASIC18.59■□□□□ 0.57
VCX3BQ9H321 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
VCX3BQ9H321 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
VCX3BQ9H321 AC012313.1-201ENST00000593393 3059 ntBASIC18.58■□□□□ 0.57
VCX3BQ9H321 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC18.58■□□□□ 0.57
VCX3BQ9H321 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
VCX3BQ9H321 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
VCX3BQ9H321 AC116050.2-201ENST00000612102 1779 ntBASIC18.58■□□□□ 0.57
VCX3BQ9H321 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
VCX3BQ9H321 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
VCX3BQ9H321 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
VCX3BQ9H321 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
VCX3BQ9H321 LSM4-201ENST00000252816 986 ntTSL 2 BASIC18.58■□□□□ 0.56
VCX3BQ9H321 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC18.58■□□□□ 0.56
VCX3BQ9H321 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC18.58■□□□□ 0.56
VCX3BQ9H321 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
VCX3BQ9H321 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
VCX3BQ9H321 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
VCX3BQ9H321 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.58■□□□□ 0.56
VCX3BQ9H321 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
VCX3BQ9H321 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
VCX3BQ9H321 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
VCX3BQ9H321 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
VCX3BQ9H321 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
VCX3BQ9H321 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
VCX3BQ9H321 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
VCX3BQ9H321 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
VCX3BQ9H321 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
VCX3BQ9H321 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VCX3BQ9H321 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.57■□□□□ 0.56
VCX3BQ9H321 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
VCX3BQ9H321 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VCX3BQ9H321 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.57■□□□□ 0.56
VCX3BQ9H321 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.57■□□□□ 0.56
VCX3BQ9H321 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VCX3BQ9H321 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
VCX3BQ9H321 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
VCX3BQ9H321 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
VCX3BQ9H321 FER1L4-210ENST00000615531 5998 ntBASIC18.57■□□□□ 0.56
VCX3BQ9H321 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
VCX3BQ9H321 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VCX3BQ9H321 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
VCX3BQ9H321 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VCX3BQ9H321 TSPY13P-201ENST00000338964 914 ntBASIC18.57■□□□□ 0.56
VCX3BQ9H321 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VCX3BQ9H321 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
VCX3BQ9H321 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VCX3BQ9H321 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms