RNA–Protein interactions for RNA: ENST00000406797.5

PRKAR1B-204, Transcript of protein kinase cAMP-dependent type I regulatory subunit beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAR1B, Length 2,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAR1B-204ENST00000406797 NISCHQ9Y2I1 1504 aa40.28■■■■■ 4.04
PRKAR1B-204ENST00000406797 CCDC180Q9P1Z9 1646 aa35.34■■■■□ 3.25
PRKAR1B-204ENST00000406797 ZCCHC6Q5VYS8 1495 aaKnown RBP33.81■■■■□ 3
PRKAR1B-204ENST00000406797 DCAF1Q9Y4B6 1507 aa33.41■■■□□ 2.94
PRKAR1B-204ENST00000406797 ABCC9O60706 1549 aa33.4■■■□□ 2.94
PRKAR1B-204ENST00000406797 MYO15BQ96JP2 1530 aa33.13■■■□□ 2.89
PRKAR1B-204ENST00000406797 DCAF8L2P0C7V8 631 aa33.06■■■□□ 2.88
PRKAR1B-204ENST00000406797 NACADO15069 1562 aa32.92■■■□□ 2.86
PRKAR1B-204ENST00000406797 RB1CC1Q8TDY2 1594 aa32.67■■■□□ 2.82
PRKAR1B-204ENST00000406797 SHROOM4Q9ULL8 1493 aa32.45■■■□□ 2.78
PRKAR1B-204ENST00000406797 SCRIBQ14160 1630 aa32.29■■■□□ 2.76
PRKAR1B-204ENST00000406797 UNC13AQ9UPW8 1703 aa32.03■■■□□ 2.72
PRKAR1B-204ENST00000406797 BICRAQ9NZM4 1560 aa31.69■■■□□ 2.66
PRKAR1B-204ENST00000406797 PABPN1Q86U42 306 aaKnown RBP eCLIP31.38■■■□□ 2.61
PRKAR1B-204ENST00000406797 CECR2Q9BXF3 1484 aa31.24■■■□□ 2.59
PRKAR1B-204ENST00000406797 SUPT5HO00267 1087 aaKnown RBP31.16■■■□□ 2.58
PRKAR1B-204ENST00000406797 BAZ1AQ9NRL2 1556 aaPredicted RBP31.13■■■□□ 2.57
PRKAR1B-204ENST00000406797 RSF1Q96T23 1441 aaPredicted RBP31.11■■■□□ 2.57
PRKAR1B-204ENST00000406797 MROH2BQ7Z745 1585 aa31.06■■■□□ 2.56
PRKAR1B-204ENST00000406797 SMARCA4P51532 1647 aa31.03■■■□□ 2.56
PRKAR1B-204ENST00000406797 WIZO95785 1651 aa30.8■■■□□ 2.52
PRKAR1B-204ENST00000406797 PEG3Q9GZU2 1588 aa30.73■■■□□ 2.51
PRKAR1B-204ENST00000406797 EIF4G1Q04637 1599 aaKnown RBP30.72■■■□□ 2.51
PRKAR1B-204ENST00000406797 SMARCA2P51531 1590 aa30.56■■■□□ 2.48
PRKAR1B-204ENST00000406797 ATAD2BQ9ULI0 1458 aa30.54■■■□□ 2.48
PRKAR1B-204ENST00000406797 TOP2AP11388 1531 aaKnown RBP30.53■■■□□ 2.48
PRKAR1B-204ENST00000406797 NCAPD3P42695 1498 aa30.36■■■□□ 2.45
PRKAR1B-204ENST00000406797 BAZ1BQ9UIG0 1483 aaKnown RBP30.33■■■□□ 2.45
PRKAR1B-204ENST00000406797 HMGXB3Q12766 1538 aa30.33■■■□□ 2.45
PRKAR1B-204ENST00000406797 CC2D2AQ9P2K1 1620 aa30.31■■■□□ 2.44
PRKAR1B-204ENST00000406797 CCDC88BA6NC98 1476 aa30.16■■■□□ 2.42
PRKAR1B-204ENST00000406797 CHIC1Q5VXU3 224 aa29.96■■■□□ 2.39
PRKAR1B-204ENST00000406797 DNAJC5BQ9UF47 199 aa29.63■■■□□ 2.33
PRKAR1B-204ENST00000406797 CFTRP13569 1480 aa29.61■■■□□ 2.33
PRKAR1B-204ENST00000406797 PRDM2Q13029 1718 aa29.55■■■□□ 2.32
PRKAR1B-204ENST00000406797 CADPSQ9ULU8 1353 aa29.51■■■□□ 2.32
PRKAR1B-204ENST00000406797 HRCP23327 699 aa29.44■■■□□ 2.3
PRKAR1B-204ENST00000406797 ABCC8Q09428 1581 aa29.4■■■□□ 2.3
PRKAR1B-204ENST00000406797 LAMC3Q9Y6N6 1575 aa29.39■■■□□ 2.29
PRKAR1B-204ENST00000406797 TRIM41Q8WV44 630 aa29.33■■■□□ 2.29
PRKAR1B-204ENST00000406797 WRNQ14191 1432 aaPredicted RBP eCLIP29.28■■■□□ 2.288e-6■■■■■ 51.9
PRKAR1B-204ENST00000406797 NESP48681 1621 aa29.27■■■□□ 2.28
PRKAR1B-204ENST00000406797 SYNJ1O43426 1573 aa29.19■■■□□ 2.26
PRKAR1B-204ENST00000406797 FANCD2Q9BXW9 1451 aa29.18■■■□□ 2.26
PRKAR1B-204ENST00000406797 BIVM-ERCC5R4GMW8 1640 aa29.15■■■□□ 2.26
PRKAR1B-204ENST00000406797 TOP2BQ02880 1626 aa29.14■■■□□ 2.26
PRKAR1B-204ENST00000406797 PELP1Q8IZL8 1130 aaKnown RBP29.11■■■□□ 2.25
PRKAR1B-204ENST00000406797 PDS5BQ9NTI5 1447 aa29.1■■■□□ 2.25
PRKAR1B-204ENST00000406797 CUX1P39880 1505 aa29.07■■■□□ 2.24
PRKAR1B-204ENST00000406797 CEP164Q9UPV0 1460 aa29.03■■■□□ 2.24
PRKAR1B-204ENST00000406797 KIF21AQ7Z4S6 1674 aa29■■■□□ 2.23
PRKAR1B-204ENST00000406797 PPARGC1BQ86YN6 1023 aaKnown RBP28.94■■■□□ 2.22
PRKAR1B-204ENST00000406797 DNMBPQ6XZF7 1577 aa28.93■■■□□ 2.22
PRKAR1B-204ENST00000406797 TOPBP1Q92547 1522 aa28.86■■■□□ 2.21
PRKAR1B-204ENST00000406797 URB2Q14146 1524 aaKnown RBP28.84■■■□□ 2.21
PRKAR1B-204ENST00000406797 LOC105371045A0A1W2PR82 267 aa28.83■■■□□ 2.21
PRKAR1B-204ENST00000406797 EEA1Q15075 1411 aa28.81■■■□□ 2.2
PRKAR1B-204ENST00000406797 SOGA1O94964 1423 aa28.79■■■□□ 2.2
PRKAR1B-204ENST00000406797 FGD5Q6ZNL6 1462 aa28.77■■■□□ 2.2
PRKAR1B-204ENST00000406797 FAM9AQ8IZU1 332 aaPredicted RBP28.76■■■□□ 2.19
PRKAR1B-204ENST00000406797 MRC2Q9UBG0 1479 aa28.76■■■□□ 2.19
PRKAR1B-204ENST00000406797 RUSC2Q8N2Y8 1516 aa28.69■■■□□ 2.18
PRKAR1B-204ENST00000406797 POLA1P09884 1462 aaPredicted RBP28.69■■■□□ 2.18
PRKAR1B-204ENST00000406797 PCGF6Q9BYE7 350 aa28.68■■■□□ 2.18
PRKAR1B-204ENST00000406797 ERCC6Q03468 1493 aa28.67■■■□□ 2.18
PRKAR1B-204ENST00000406797 WDR62O43379 1518 aa28.66■■■□□ 2.18
PRKAR1B-204ENST00000406797 THOC2Q8NI27 1593 aaKnown RBP28.62■■■□□ 2.17
PRKAR1B-204ENST00000406797 ABCA10Q8WWZ4 1543 aa28.57■■■□□ 2.16
PRKAR1B-204ENST00000406797 KIF27Q86VH2 1401 aa28.57■■■□□ 2.16
PRKAR1B-204ENST00000406797 CSRNP3Q8WYN3 585 aa28.57■■■□□ 2.16
PRKAR1B-204ENST00000406797 WDR97A6NE52 1622 aa28.56■■■□□ 2.16
PRKAR1B-204ENST00000406797 RAD54L2Q9Y4B4 1467 aa28.54■■■□□ 2.16
PRKAR1B-204ENST00000406797 CUX2O14529 1486 aa28.51■■■□□ 2.16
PRKAR1B-204ENST00000406797 TARBP1Q13395 1621 aaKnown RBP28.49■■■□□ 2.15
PRKAR1B-204ENST00000406797 KIF21BO75037 1637 aa28.46■■■□□ 2.15
PRKAR1B-204ENST00000406797 ABCA5Q8WWZ7 1642 aa28.38■■■□□ 2.13
PRKAR1B-204ENST00000406797 IFT140Q96RY7 1462 aa28.38■■■□□ 2.13
PRKAR1B-204ENST00000406797 EHMT2Q96KQ7 1210 aa28.35■■■□□ 2.13
PRKAR1B-204ENST00000406797 PRXQ9BXM0 1461 aa28.35■■■□□ 2.13
PRKAR1B-204ENST00000406797 GOLGA3Q08378 1498 aa28.34■■■□□ 2.13
PRKAR1B-204ENST00000406797 IGF1RP08069 1367 aa28.33■■■□□ 2.13
PRKAR1B-204ENST00000406797 ERICH3Q5RHP9 1530 aa28.32■■■□□ 2.12
PRKAR1B-204ENST00000406797 GAPVD1Q14C86 1478 aa28.26■■■□□ 2.11
PRKAR1B-204ENST00000406797 SCAF1Q9H7N4 1312 aaKnown RBP28.25■■■□□ 2.11
PRKAR1B-204ENST00000406797 TDRD9Q8NDG6 1382 aaKnown RBP28.25■■■□□ 2.11
PRKAR1B-204ENST00000406797 RAPGEF2Q9Y4G8 1499 aa28.24■■■□□ 2.11
PRKAR1B-204ENST00000406797 CUL7Q14999 1698 aa28.23■■■□□ 2.11
PRKAR1B-204ENST00000406797 TNIKQ9UKE5 1360 aa28.21■■■□□ 2.11
PRKAR1B-204ENST00000406797 PBRM1Q86U86 1689 aa28.19■■■□□ 2.1
PRKAR1B-204ENST00000406797 CARMIL1Q5VZK9 1371 aa28.17■■■□□ 2.1
PRKAR1B-204ENST00000406797 ZNF608Q9ULD9 1512 aaPredicted RBP28.15■■■□□ 2.1
PRKAR1B-204ENST00000406797 AQRO60306 1485 aaKnown RBP eCLIP28.13■■■□□ 2.09
PRKAR1B-204ENST00000406797 EIF4G3O43432 1585 aaKnown RBP28.12■■■□□ 2.09
PRKAR1B-204ENST00000406797 GRIN2BQ13224 1484 aa28.1■■■□□ 2.09
PRKAR1B-204ENST00000406797 UBTFP17480 764 aaKnown RBP28.09■■■□□ 2.09
PRKAR1B-204ENST00000406797 MYT1Q01538 1121 aa28.08■■■□□ 2.09
PRKAR1B-204ENST00000406797 ADAMTS12P58397 1594 aa28.01■■■□□ 2.07
PRKAR1B-204ENST00000406797 CEP162Q5TB80 1403 aa28■■■□□ 2.07
PRKAR1B-204ENST00000406797 FHAD1B1AJZ9 1412 aa27.98■■■□□ 2.07
PRKAR1B-204ENST00000406797 MAGI1Q96QZ7 1491 aaPredicted RBP27.92■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms