Protein–RNA interactions for Protein: Q8NCU1

CCDC197, Putative uncharacterized protein CCDC197, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197Q8NCU1 AC093525.10-201ENST00000625130 1569 ntBASIC19.4■□□□□ 0.7
CCDC197Q8NCU1 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC197Q8NCU1 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
CCDC197Q8NCU1 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC197Q8NCU1 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.4■□□□□ 0.7
CCDC197Q8NCU1 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC197Q8NCU1 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC197Q8NCU1 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC197Q8NCU1 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC197Q8NCU1 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC197Q8NCU1 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC197Q8NCU1 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC197Q8NCU1 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC197Q8NCU1 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC197Q8NCU1 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.4■□□□□ 0.7
CCDC197Q8NCU1 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC197Q8NCU1 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.4■□□□□ 0.7
CCDC197Q8NCU1 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CCDC197Q8NCU1 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC197Q8NCU1 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC197Q8NCU1 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CCDC197Q8NCU1 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.39■□□□□ 0.7
CCDC197Q8NCU1 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CCDC197Q8NCU1 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.39■□□□□ 0.7
CCDC197Q8NCU1 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
CCDC197Q8NCU1 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.39■□□□□ 0.7
CCDC197Q8NCU1 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CCDC197Q8NCU1 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
CCDC197Q8NCU1 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC19.39■□□□□ 0.69
CCDC197Q8NCU1 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC197Q8NCU1 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.39■□□□□ 0.69
CCDC197Q8NCU1 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC19.39■□□□□ 0.69
CCDC197Q8NCU1 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC197Q8NCU1 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC197Q8NCU1 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CCDC197Q8NCU1 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC19.39■□□□□ 0.69
CCDC197Q8NCU1 FAM21FP-204ENST00000608637 956 ntBASIC19.39■□□□□ 0.69
CCDC197Q8NCU1 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC197Q8NCU1 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.39■□□□□ 0.69
CCDC197Q8NCU1 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
CCDC197Q8NCU1 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.39■□□□□ 0.69
CCDC197Q8NCU1 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC197Q8NCU1 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC197Q8NCU1 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC197Q8NCU1 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC197Q8NCU1 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC197Q8NCU1 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC197Q8NCU1 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC197Q8NCU1 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC197Q8NCU1 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC197Q8NCU1 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC197Q8NCU1 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC197Q8NCU1 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC197Q8NCU1 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC197Q8NCU1 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CCDC197Q8NCU1 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC197Q8NCU1 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC197Q8NCU1 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.38■□□□□ 0.69
CCDC197Q8NCU1 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC197Q8NCU1 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC197Q8NCU1 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.38■□□□□ 0.69
CCDC197Q8NCU1 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.38■□□□□ 0.69
CCDC197Q8NCU1 MIR3621-201ENST00000580529 85 ntBASIC19.38■□□□□ 0.69
CCDC197Q8NCU1 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
CCDC197Q8NCU1 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.38■□□□□ 0.69
CCDC197Q8NCU1 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC197Q8NCU1 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC197Q8NCU1 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC197Q8NCU1 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.37■□□□□ 0.69
CCDC197Q8NCU1 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC197Q8NCU1 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC197Q8NCU1 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC197Q8NCU1 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC197Q8NCU1 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC197Q8NCU1 KRT16P3-201ENST00000439127 1283 ntBASIC19.37■□□□□ 0.69
CCDC197Q8NCU1 CREM-229ENST00000474362 1030 ntTSL 2 BASIC19.37■□□□□ 0.69
CCDC197Q8NCU1 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.37■□□□□ 0.69
CCDC197Q8NCU1 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC197Q8NCU1 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CCDC197Q8NCU1 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC197Q8NCU1 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CCDC197Q8NCU1 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC197Q8NCU1 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.37■□□□□ 0.69
CCDC197Q8NCU1 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC197Q8NCU1 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.37■□□□□ 0.69
CCDC197Q8NCU1 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC197Q8NCU1 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
CCDC197Q8NCU1 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
CCDC197Q8NCU1 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.37■□□□□ 0.69
CCDC197Q8NCU1 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
CCDC197Q8NCU1 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.37■□□□□ 0.69
CCDC197Q8NCU1 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC197Q8NCU1 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC197Q8NCU1 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC197Q8NCU1 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.37■□□□□ 0.69
CCDC197Q8NCU1 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC197Q8NCU1 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC197Q8NCU1 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC197Q8NCU1 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC197Q8NCU1 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms