Protein–RNA interactions for Protein: Q7KZF4

SND1, Staphylococcal nuclease domain-containing protein 1, humanhuman

Known RBP eCLIP

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1Q7KZF4 ATP5A1-205ENST00000586592 2214 ntTSL 225.61■■□□□ 1.691e-8■■□□□ 14
SND1Q7KZF4 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC25.33■■□□□ 1.651e-8■■□□□ 14
SND1Q7KZF4 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC23.91■■□□□ 1.425e-10■■□□□ 14
SND1Q7KZF4 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC22.62■■□□□ 1.211e-6■■□□□ 14
SND1Q7KZF4 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC22.07■■□□□ 1.121e-6■■□□□ 14
SND1Q7KZF4 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.041e-6■■□□□ 14
SND1Q7KZF4 ALG9-217ENST00000619129 2020 ntTSL 221.28■■□□□ 11e-6■■□□□ 14
SND1Q7KZF4 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.925e-10■■□□□ 14
SND1Q7KZF4 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.781e-6■■□□□ 14
SND1Q7KZF4 ALG9-216ENST00000618252 1147 ntTSL 518.25■□□□□ 0.511e-6■■□□□ 14
SND1Q7KZF4 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51e-6■■□□□ 14
SND1Q7KZF4 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.481e-6■■□□□ 14
SND1Q7KZF4 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.481e-6■■□□□ 14
SND1Q7KZF4 IDH1-202ENST00000415282 942 ntTSL 218.05■□□□□ 0.481e-6■■□□□ 14
SND1Q7KZF4 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.481e-6■■□□□ 14
SND1Q7KZF4 ALG9-213ENST00000613181 1373 ntTSL 217.98■□□□□ 0.471e-6■■□□□ 14
SND1Q7KZF4 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC17.68■□□□□ 0.421e-6■■□□□ 14
SND1Q7KZF4 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.25■□□□□ 0.191e-6■■□□□ 14
SND1Q7KZF4 SCAMP3-208ENST00000490999 1011 ntTSL 215.88■□□□□ 0.135e-10■■□□□ 14
SND1Q7KZF4 HLA-K-203ENST00000430151 1046 ntBASIC15.84■□□□□ 0.131e-6■■□□□ 14
SND1Q7KZF4 ATP5A1-211ENST00000590156 1931 ntTSL 214.88□□□□□ -0.031e-8■■□□□ 14
SND1Q7KZF4 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC13.94□□□□□ -0.181e-8■■□□□ 14
SND1Q7KZF4 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.211e-8■■□□□ 14
SND1Q7KZF4 IDH1-207ENST00000462386 1614 ntTSL 213.49□□□□□ -0.258e-7■■□□□ 14
SND1Q7KZF4 IDH1-201ENST00000345146 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.411e-6■■□□□ 14
SND1Q7KZF4 TMEM2-206ENST00000396272 1437 ntTSL 2 BASIC11.47□□□□□ -0.573e-7■■□□□ 14
SND1Q7KZF4 IDH1-203ENST00000415913 2441 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.631e-6■■□□□ 14
SND1Q7KZF4 ATP5A1-202ENST00000398752 5818 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.651e-8■■□□□ 14
SND1Q7KZF4 ALG9-210ENST00000531154 1930 ntTSL 2 BASIC10.9□□□□□ -0.661e-6■■□□□ 14
SND1Q7KZF4 SCAMP3-205ENST00000472397 1030 ntTSL 310.44□□□□□ -0.745e-10■■□□□ 14
SND1Q7KZF4 SCAMP3-206ENST00000478737 649 ntTSL 310.28□□□□□ -0.765e-10■■□□□ 14
SND1Q7KZF4 NEO1-208ENST00000560328 5895 ntTSL 1 (best)10.24□□□□□ -0.771e-6■■□□□ 14
SND1Q7KZF4 ATP5A1-206ENST00000587902 571 ntTSL 29.77□□□□□ -0.852e-8■■□□□ 14
SND1Q7KZF4 ALG9-209ENST00000530851 692 ntTSL 58.61□□□□□ -1.031e-6■■□□□ 14
SND1Q7KZF4 LDHA-210ENST00000486690 664 ntTSL 58.15□□□□□ -1.13e-27■■□□□ 14
SND1Q7KZF4 ALG9-207ENST00000527714 704 ntTSL 27.41□□□□□ -1.221e-6■■□□□ 14
SND1Q7KZF4 ATP5A1-204ENST00000586523 4547 nt7.15□□□□□ -1.277e-9■■□□□ 14
SND1Q7KZF4 PSMD8-206ENST00000592001 853 ntTSL 28.53□□□□□ -1.043e-10■■□□□ 14
SND1Q7KZF4 C2-210ENST00000468407 694 ntTSL 211.51□□□□□ -0.572e-15■■□□□ 14
SND1Q7KZF4 PTK7-206ENST00000461100 546 ntTSL 413.99□□□□□ -0.178e-9■■□□□ 14
SND1Q7KZF4 PTK7-219ENST00000494146 576 ntTSL 410.38□□□□□ -0.758e-9■■□□□ 14
SND1Q7KZF4 WARS-242ENST00000557614 499 ntTSL 28.74□□□□□ -1.013e-13■■□□□ 14
SND1Q7KZF4 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC4.61□□□□□ -1.674e-6■■□□□ 14
SND1Q7KZF4 TXNDC12-202ENST00000469458 446 ntTSL 310.2□□□□□ -0.781e-6■■□□□ 14
SND1Q7KZF4 HBE1-203ENST00000396895 578 ntTSL 55.73□□□□□ -1.494e-7■■□□□ 14
SND1Q7KZF4 SLC38A3-203ENST00000439524 424 ntTSL 312.2□□□□□ -0.463e-7■■□□□ 14
SND1Q7KZF4 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.421e-6■■□□□ 14
SND1Q7KZF4 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.361e-6■■□□□ 14
SND1Q7KZF4 PPT2-EGFL8-207ENST00000585246 1051 ntAPPRIS ALT2 TSL 222.11■■□□□ 1.131e-6■■□□□ 14
SND1Q7KZF4 PPT2-254ENST00000493548 790 ntTSL 522.01■■□□□ 1.111e-6■■□□□ 14
SND1Q7KZF4 PPT2-250ENST00000424499 722 ntTSL 320.54■□□□□ 0.881e-6■■□□□ 14
SND1Q7KZF4 PPT2-251ENST00000436118 633 ntTSL 419.21■□□□□ 0.671e-6■■□□□ 14
SND1Q7KZF4 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.671e-6■■□□□ 14
SND1Q7KZF4 PPT2-EGFL8-206ENST00000583227 1540 ntAPPRIS ALT2 TSL 518.27■□□□□ 0.511e-6■■□□□ 14
SND1Q7KZF4 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.471e-6■■□□□ 14
SND1Q7KZF4 PPT2-EGFL8-203ENST00000428388 2878 ntAPPRIS P5 TSL 217.96■□□□□ 0.471e-6■■□□□ 14
SND1Q7KZF4 PPT2-EGFL8-204ENST00000453656 1327 ntTSL 217.55■□□□□ 0.41e-6■■□□□ 14
SND1Q7KZF4 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.011e-6■■□□□ 14
SND1Q7KZF4 PPT2-EGFL8-202ENST00000422437 4181 ntAPPRIS P5 TSL 5 BASIC14.82□□□□□ -0.041e-6■■□□□ 14
SND1Q7KZF4 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.058e-17■■□□□ 14
SND1Q7KZF4 CD99-208ENST00000482405 842 ntTSL 221.58■■□□□ 1.058e-17■■□□□ 14
SND1Q7KZF4 CD99-207ENST00000482293 466 ntTSL 221.07■□□□□ 0.968e-17■■□□□ 14
SND1Q7KZF4 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.948e-17■■□□□ 14
SND1Q7KZF4 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.98e-17■■□□□ 14
SND1Q7KZF4 CD99-206ENST00000449611 604 ntAPPRIS ALT2 TSL 518.66■□□□□ 0.588e-17■■□□□ 14
SND1Q7KZF4 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.518e-17■■□□□ 14
SND1Q7KZF4 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.418e-17■■□□□ 14
SND1Q7KZF4 CD99-211ENST00000623253 573 ntTSL 1 (best)16.76■□□□□ 0.278e-17■■□□□ 14
SND1Q7KZF4 CD99-201ENST00000381177 756 ntTSL 210.14□□□□□ -0.798e-17■■□□□ 14
SND1Q7KZF4 LAMC1-205ENST00000484114 657 ntTSL 39.34□□□□□ -0.919e-7■■□□□ 14
SND1Q7KZF4 SCARB2-212ENST00000638663 1922 ntTSL 522.71■■□□□ 1.232e-6■■□□□ 13.9
SND1Q7KZF4 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC21.6■■□□□ 1.052e-6■■□□□ 13.9
SND1Q7KZF4 SCARB2-213ENST00000638680 5817 ntTSL 520.65■□□□□ 0.92e-6■■□□□ 13.9
SND1Q7KZF4 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.722e-6■■□□□ 13.9
SND1Q7KZF4 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC19.37■□□□□ 0.692e-6■■□□□ 13.9
SND1Q7KZF4 SCARB2-221ENST00000640341 3403 ntTSL 516.23■□□□□ 0.192e-6■■□□□ 13.9
SND1Q7KZF4 SCARB2-216ENST00000639300 4554 ntTSL 516.02■□□□□ 0.152e-6■■□□□ 13.9
SND1Q7KZF4 SCARB2-208ENST00000638372 4811 ntTSL 515.87■□□□□ 0.132e-6■■□□□ 13.9
SND1Q7KZF4 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.082e-6■■□□□ 13.9
SND1Q7KZF4 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.042e-6■■□□□ 13.9
SND1Q7KZF4 SCARB2-222ENST00000640634 1734 ntTSL 512.46□□□□□ -0.412e-6■■□□□ 13.9
SND1Q7KZF4 SCARB2-202ENST00000452464 1495 ntTSL 2 BASIC12.24□□□□□ -0.452e-6■■□□□ 13.9
SND1Q7KZF4 SCARB2-211ENST00000638603 4284 ntTSL 5 BASIC9.12□□□□□ -0.952e-6■■□□□ 13.9
SND1Q7KZF4 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC7.31□□□□□ -1.242e-6■■□□□ 13.9
SND1Q7KZF4 SCARB2-218ENST00000639715 4355 ntTSL 56.3□□□□□ -1.42e-6■■□□□ 13.9
SND1Q7KZF4 PTK7-207ENST00000461389 1035 ntTSL 215.08■□□□□ 04e-7■■□□□ 13.9
SND1Q7KZF4 CLU-205ENST00000519742 583 ntTSL 318.93■□□□□ 0.623e-13■■□□□ 13.9
SND1Q7KZF4 CLU-206ENST00000520491 580 ntTSL 316.52■□□□□ 0.243e-13■■□□□ 13.9
SND1Q7KZF4 CLU-212ENST00000522413 654 ntTSL 314.96□□□□□ -0.013e-13■■□□□ 13.9
SND1Q7KZF4 WARS-214ENST00000554331 831 ntTSL 217.59■□□□□ 0.414e-7■■□□□ 13.9
SND1Q7KZF4 WARS-243ENST00000557722 848 ntTSL 516.92■□□□□ 0.34e-7■■□□□ 13.9
SND1Q7KZF4 WARS-222ENST00000555063 573 ntTSL 215.52■□□□□ 0.084e-7■■□□□ 13.9
SND1Q7KZF4 WARS-229ENST00000556435 528 ntTSL 213.58□□□□□ -0.244e-7■■□□□ 13.9
SND1Q7KZF4 WARS-228ENST00000556338 547 ntTSL 410.78□□□□□ -0.684e-7■■□□□ 13.9
SND1Q7KZF4 WARS-211ENST00000553808 1060 ntTSL 29.31□□□□□ -0.924e-7■■□□□ 13.9
SND1Q7KZF4 WARS-240ENST00000557297 821 ntTSL 39.11□□□□□ -0.954e-7■■□□□ 13.9
SND1Q7KZF4 GARS-205ENST00000470392 469 ntTSL 56.32□□□□□ -1.45e-7■■□□□ 13.9
SND1Q7KZF4 FST-203ENST00000491717 640 ntTSL 210.1□□□□□ -0.795e-8■■□□□ 13.9
SND1Q7KZF4 CSF1-206ENST00000488198 1009 ntTSL 318.36■□□□□ 0.532e-6■■□□□ 13.9
SND1Q7KZF4 IGF2R-204ENST00000475834 758 ntTSL 212.17□□□□□ -0.468e-17■■□□□ 13.9
Retrieved 100 of 13,567 protein–RNA pairs in 172.8 ms