RNA–Protein interactions for RNA: ENST00000482293.6

CD99-207, Transcript of CD99 molecule (Xg blood group), humanhuman

TSL 2

Gene CD99, Length 466 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD99-207ENST00000482293 NISCHQ9Y2I1 1504 aa48.82■■■■■ 5.41
CD99-207ENST00000482293 CCDC180Q9P1Z9 1646 aa43.24■■■■■ 4.51
CD99-207ENST00000482293 ABCC9O60706 1549 aa42.19■■■■■ 4.34
CD99-207ENST00000482293 DCAF8L2P0C7V8 631 aa40.79■■■■■ 4.12
CD99-207ENST00000482293 ZCCHC6Q5VYS8 1495 aaKnown RBP40.7■■■■■ 4.11
CD99-207ENST00000482293 NACADO15069 1562 aa40.65■■■■■ 4.1
CD99-207ENST00000482293 RB1CC1Q8TDY2 1594 aa40.64■■■■■ 4.1
CD99-207ENST00000482293 MYO15BQ96JP2 1530 aa40.47■■■■■ 4.07
CD99-207ENST00000482293 DCAF1Q9Y4B6 1507 aa40.38■■■■■ 4.06
CD99-207ENST00000482293 UNC13AQ9UPW8 1703 aa39.63■■■■□ 3.94
CD99-207ENST00000482293 SCRIBQ14160 1630 aa39.53■■■■□ 3.92
CD99-207ENST00000482293 PABPN1Q86U42 306 aaKnown RBP eCLIP39.5■■■■□ 3.914e-8■■■■■ 30
CD99-207ENST00000482293 BICRAQ9NZM4 1560 aa39.4■■■■□ 3.9
CD99-207ENST00000482293 SHROOM4Q9ULL8 1493 aa38.99■■■■□ 3.83
CD99-207ENST00000482293 DNAJC5BQ9UF47 199 aa38.55■■■■□ 3.76
CD99-207ENST00000482293 EIF4G1Q04637 1599 aaKnown RBP38.35■■■■□ 3.73
CD99-207ENST00000482293 CC2D2AQ9P2K1 1620 aa38.13■■■■□ 3.69
CD99-207ENST00000482293 CECR2Q9BXF3 1484 aa38.03■■■■□ 3.68
CD99-207ENST00000482293 BAZ1AQ9NRL2 1556 aaPredicted RBP37.81■■■■□ 3.64
CD99-207ENST00000482293 SMARCA4P51532 1647 aa37.81■■■■□ 3.64
CD99-207ENST00000482293 MROH2BQ7Z745 1585 aa37.63■■■■□ 3.62
CD99-207ENST00000482293 ATAD2BQ9ULI0 1458 aa37.58■■■■□ 3.61
CD99-207ENST00000482293 NCAPD3P42695 1498 aa37.53■■■■□ 3.6
CD99-207ENST00000482293 SMARCA2P51531 1590 aa37.53■■■■□ 3.6
CD99-207ENST00000482293 PEG3Q9GZU2 1588 aa37.43■■■■□ 3.58
CD99-207ENST00000482293 HMGXB3Q12766 1538 aa37.34■■■■□ 3.57
CD99-207ENST00000482293 RSF1Q96T23 1441 aaPredicted RBP37.3■■■■□ 3.56
CD99-207ENST00000482293 BAZ1BQ9UIG0 1483 aaKnown RBP37.29■■■■□ 3.56
CD99-207ENST00000482293 WIZO95785 1651 aa37.21■■■■□ 3.55
CD99-207ENST00000482293 TOP2AP11388 1531 aaKnown RBP36.85■■■■□ 3.49
CD99-207ENST00000482293 SUPT5HO00267 1087 aaKnown RBP36.58■■■■□ 3.45
CD99-207ENST00000482293 NESP48681 1621 aa36.56■■■■□ 3.44
CD99-207ENST00000482293 LAMC3Q9Y6N6 1575 aa36.48■■■■□ 3.43
CD99-207ENST00000482293 CADPSQ9ULU8 1353 aa36.47■■■■□ 3.43
CD99-207ENST00000482293 CCDC88BA6NC98 1476 aa36.44■■■■□ 3.42
CD99-207ENST00000482293 ERCC6Q03468 1493 aa36.35■■■■□ 3.41
CD99-207ENST00000482293 CFTRP13569 1480 aa36.28■■■■□ 3.4
CD99-207ENST00000482293 PDS5BQ9NTI5 1447 aa36.26■■■■□ 3.4
CD99-207ENST00000482293 KIF21AQ7Z4S6 1674 aa36.07■■■■□ 3.37
CD99-207ENST00000482293 FANCD2Q9BXW9 1451 aa36.04■■■■□ 3.36
CD99-207ENST00000482293 CEP164Q9UPV0 1460 aa35.96■■■■□ 3.35
CD99-207ENST00000482293 THOC2Q8NI27 1593 aaKnown RBP35.92■■■■□ 3.34
CD99-207ENST00000482293 PRDM2Q13029 1718 aa35.9■■■■□ 3.34
CD99-207ENST00000482293 MRC2Q9UBG0 1479 aa35.86■■■■□ 3.33
CD99-207ENST00000482293 CUX2O14529 1486 aa35.86■■■■□ 3.33
CD99-207ENST00000482293 WDR62O43379 1518 aa35.72■■■■□ 3.31
CD99-207ENST00000482293 URB2Q14146 1524 aaKnown RBP35.66■■■■□ 3.3
CD99-207ENST00000482293 ABCC8Q09428 1581 aa35.49■■■■□ 3.27
CD99-207ENST00000482293 TOPBP1Q92547 1522 aa35.48■■■■□ 3.27
CD99-207ENST00000482293 DNMBPQ6XZF7 1577 aa35.43■■■■□ 3.26
CD99-207ENST00000482293 CUX1P39880 1505 aa35.29■■■■□ 3.24
CD99-207ENST00000482293 IFT140Q96RY7 1462 aa35.21■■■■□ 3.23
CD99-207ENST00000482293 POLA1P09884 1462 aaPredicted RBP35.19■■■■□ 3.22
CD99-207ENST00000482293 WRNQ14191 1432 aaPredicted RBP eCLIP35.17■■■■□ 3.22
CD99-207ENST00000482293 FGD5Q6ZNL6 1462 aa35.15■■■■□ 3.22
CD99-207ENST00000482293 SOGA1O94964 1423 aa35.08■■■■□ 3.21
CD99-207ENST00000482293 RAD54L2Q9Y4B4 1467 aa35.06■■■■□ 3.2
CD99-207ENST00000482293 TARBP1Q13395 1621 aaKnown RBP35.04■■■■□ 3.2
CD99-207ENST00000482293 SYNJ1O43426 1573 aa35.04■■■■□ 3.2
CD99-207ENST00000482293 ZNF608Q9ULD9 1512 aaPredicted RBP35.03■■■■□ 3.2
CD99-207ENST00000482293 TOP2BQ02880 1626 aa35.03■■■■□ 3.2
CD99-207ENST00000482293 BIVM-ERCC5R4GMW8 1640 aa35■■■■□ 3.19
CD99-207ENST00000482293 AQRO60306 1485 aaKnown RBP eCLIP34.88■■■■□ 3.177e-6■■□□□ 13.1
CD99-207ENST00000482293 TDRD9Q8NDG6 1382 aaKnown RBP34.87■■■■□ 3.17
CD99-207ENST00000482293 EIF4G3O43432 1585 aaKnown RBP34.87■■■■□ 3.17
CD99-207ENST00000482293 ABCA10Q8WWZ4 1543 aa34.81■■■■□ 3.16
CD99-207ENST00000482293 WDR97A6NE52 1622 aa34.77■■■■□ 3.16
CD99-207ENST00000482293 GAPVD1Q14C86 1478 aa34.66■■■■□ 3.14
CD99-207ENST00000482293 GRIN2BQ13224 1484 aa34.63■■■■□ 3.13
CD99-207ENST00000482293 ABCA5Q8WWZ7 1642 aa34.62■■■■□ 3.13
CD99-207ENST00000482293 SNAPC4Q5SXM2 1469 aa34.55■■■■□ 3.12
CD99-207ENST00000482293 DNAJC5Q9H3Z4 198 aa34.55■■■■□ 3.12
CD99-207ENST00000482293 TRIM41Q8WV44 630 aa34.54■■■■□ 3.12
CD99-207ENST00000482293 MAGI1Q96QZ7 1491 aaPredicted RBP34.5■■■■□ 3.11
CD99-207ENST00000482293 PBRM1Q86U86 1689 aa34.5■■■■□ 3.11
CD99-207ENST00000482293 OSCARQ8IYS5 282 aa34.47■■■■□ 3.11
CD99-207ENST00000482293 FBLN2P98095 1184 aa34.46■■■■□ 3.11
CD99-207ENST00000482293 KIF27Q86VH2 1401 aa34.42■■■■□ 3.1
CD99-207ENST00000482293 CHMP7Q8WUX9 453 aaPredicted RBP34.39■■■■□ 3.1
CD99-207ENST00000482293 ERICH3Q5RHP9 1530 aa34.39■■■■□ 3.1
CD99-207ENST00000482293 SYNJ2O15056 1496 aa34.37■■■■□ 3.09
CD99-207ENST00000482293 CHD1O14646 1710 aa34.35■■■■□ 3.09
CD99-207ENST00000482293 FHAD1B1AJZ9 1412 aa34.28■■■■□ 3.08
CD99-207ENST00000482293 ADAMTS12P58397 1594 aa34.28■■■■□ 3.08
CD99-207ENST00000482293 IGF1RP08069 1367 aa34.26■■■■□ 3.08
CD99-207ENST00000482293 CHIC1Q5VXU3 224 aa34.26■■■■□ 3.08
CD99-207ENST00000482293 RUSC2Q8N2Y8 1516 aa34.18■■■■□ 3.06
CD99-207ENST00000482293 GRIN2AQ12879 1464 aa34.17■■■■□ 3.06
CD99-207ENST00000482293 CUL7Q14999 1698 aa34.09■■■■□ 3.05
CD99-207ENST00000482293 CARMIL1Q5VZK9 1371 aa34.07■■■■□ 3.04
CD99-207ENST00000482293 CLASP1Q7Z460 1538 aa34.03■■■■□ 3.04
CD99-207ENST00000482293 NUP160Q12769 1436 aa34.01■■■■□ 3.03
CD99-207ENST00000482293 CEP170Q5SW79 1584 aa33.98■■■■□ 3.03
CD99-207ENST00000482293 EEA1Q15075 1411 aa33.9■■■■□ 3.02
CD99-207ENST00000482293 RAPGEF2Q9Y4G8 1499 aa33.88■■■■□ 3.01
CD99-207ENST00000482293 CSRNP3Q8WYN3 585 aa33.87■■■■□ 3.01
CD99-207ENST00000482293 ARHGEF11O15085 1522 aa33.86■■■■□ 3.01
CD99-207ENST00000482293 FAM9AQ8IZU1 332 aaPredicted RBP33.82■■■■□ 3
CD99-207ENST00000482293 RIMBP3CA6NJZ7 1639 aa33.82■■■■□ 3
CD99-207ENST00000482293 RIMBP3BA6NNM3 1639 aa33.82■■■■□ 3
Retrieved 100 of 20,778 RNA–protein pairs in 112.3 ms