RNA–Protein interactions for RNA: ENST00000592001.5

PSMD8-206, Transcript of proteasome 26S subunit, non-ATPase 8, humanhuman

TSL 2

Gene PSMD8, Length 853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD8-206ENST00000592001 NISCHQ9Y2I1 1504 aa21.59■■□□□ 1.05
PSMD8-206ENST00000592001 ABCC9O60706 1549 aa19.99■□□□□ 0.79
PSMD8-206ENST00000592001 CCDC180Q9P1Z9 1646 aa19.69■□□□□ 0.74
PSMD8-206ENST00000592001 DNAJC5BQ9UF47 199 aa19.17■□□□□ 0.66
PSMD8-206ENST00000592001 RB1CC1Q8TDY2 1594 aa18.85■□□□□ 0.61
PSMD8-206ENST00000592001 UNC13AQ9UPW8 1703 aa18.69■□□□□ 0.58
PSMD8-206ENST00000592001 NACADO15069 1562 aa18.6■□□□□ 0.57
PSMD8-206ENST00000592001 PABPN1Q86U42 306 aaKnown RBP eCLIP18.46■□□□□ 0.55
PSMD8-206ENST00000592001 BICRAQ9NZM4 1560 aa18.43■□□□□ 0.54
PSMD8-206ENST00000592001 MYO15BQ96JP2 1530 aa18.19■□□□□ 0.5
PSMD8-206ENST00000592001 DCAF8L2P0C7V8 631 aa18.19■□□□□ 0.5
PSMD8-206ENST00000592001 CC2D2AQ9P2K1 1620 aa18.12■□□□□ 0.49
PSMD8-206ENST00000592001 CECR2Q9BXF3 1484 aa18.03■□□□□ 0.48
PSMD8-206ENST00000592001 SHROOM4Q9ULL8 1493 aa18■□□□□ 0.47
PSMD8-206ENST00000592001 EIF4G1Q04637 1599 aaKnown RBP17.94■□□□□ 0.46
PSMD8-206ENST00000592001 SCRIBQ14160 1630 aa17.86■□□□□ 0.45
PSMD8-206ENST00000592001 DNAJC5Q9H3Z4 198 aa17.85■□□□□ 0.45
PSMD8-206ENST00000592001 ZCCHC6Q5VYS8 1495 aaKnown RBP17.82■□□□□ 0.44
PSMD8-206ENST00000592001 DCAF1Q9Y4B6 1507 aa17.81■□□□□ 0.44
PSMD8-206ENST00000592001 CUX2O14529 1486 aa17.39■□□□□ 0.37
PSMD8-206ENST00000592001 ERCC6Q03468 1493 aa17.22■□□□□ 0.35
PSMD8-206ENST00000592001 NCAPD3P42695 1498 aa17.14■□□□□ 0.33
PSMD8-206ENST00000592001 NESP48681 1621 aa17.1■□□□□ 0.33
PSMD8-206ENST00000592001 THOC2Q8NI27 1593 aaKnown RBP17.09■□□□□ 0.33
PSMD8-206ENST00000592001 ATAD2BQ9ULI0 1458 aa17.05■□□□□ 0.32
PSMD8-206ENST00000592001 HMGXB3Q12766 1538 aa17.04■□□□□ 0.32
PSMD8-206ENST00000592001 SMARCA4P51532 1647 aa17■□□□□ 0.31
PSMD8-206ENST00000592001 KIF21AQ7Z4S6 1674 aa16.98■□□□□ 0.31
PSMD8-206ENST00000592001 SMARCA2P51531 1590 aa16.98■□□□□ 0.31
PSMD8-206ENST00000592001 LAMC3Q9Y6N6 1575 aa16.88■□□□□ 0.29
PSMD8-206ENST00000592001 TRIM41Q8WV44 630 aa16.84■□□□□ 0.29
PSMD8-206ENST00000592001 PEG3Q9GZU2 1588 aa16.84■□□□□ 0.29
PSMD8-206ENST00000592001 BAZ1BQ9UIG0 1483 aaKnown RBP16.83■□□□□ 0.28
PSMD8-206ENST00000592001 BAZ1AQ9NRL2 1556 aaPredicted RBP16.77■□□□□ 0.27
PSMD8-206ENST00000592001 WDR62O43379 1518 aa16.68■□□□□ 0.26
PSMD8-206ENST00000592001 PDS5BQ9NTI5 1447 aa16.68■□□□□ 0.26
PSMD8-206ENST00000592001 MROH2BQ7Z745 1585 aa16.66■□□□□ 0.26
PSMD8-206ENST00000592001 MRC2Q9UBG0 1479 aa16.65■□□□□ 0.26
PSMD8-206ENST00000592001 CADPSQ9ULU8 1353 aa16.55■□□□□ 0.24
PSMD8-206ENST00000592001 WIZO95785 1651 aa16.5■□□□□ 0.23
PSMD8-206ENST00000592001 CEP164Q9UPV0 1460 aa16.48■□□□□ 0.23
PSMD8-206ENST00000592001 RIMBP3CA6NJZ7 1639 aa16.47■□□□□ 0.23
PSMD8-206ENST00000592001 RIMBP3BA6NNM3 1639 aa16.47■□□□□ 0.23
PSMD8-206ENST00000592001 RIMBP3Q9UFD9 1639 aa16.47■□□□□ 0.23
PSMD8-206ENST00000592001 FANCD2Q9BXW9 1451 aa16.42■□□□□ 0.22
PSMD8-206ENST00000592001 OSCARQ8IYS5 282 aa16.4■□□□□ 0.22
PSMD8-206ENST00000592001 URB2Q14146 1524 aaKnown RBP16.38■□□□□ 0.21
PSMD8-206ENST00000592001 PRDM2Q13029 1718 aa16.37■□□□□ 0.21
PSMD8-206ENST00000592001 CFTRP13569 1480 aa16.33■□□□□ 0.2
PSMD8-206ENST00000592001 ARHGEF11O15085 1522 aa16.3■□□□□ 0.2
PSMD8-206ENST00000592001 ZNF608Q9ULD9 1512 aaPredicted RBP16.24■□□□□ 0.19
PSMD8-206ENST00000592001 CHD1O14646 1710 aa16.22■□□□□ 0.19
PSMD8-206ENST00000592001 TOP2AP11388 1531 aaKnown RBP16.19■□□□□ 0.18
PSMD8-206ENST00000592001 EIF4G3O43432 1585 aaKnown RBP16.18■□□□□ 0.18
PSMD8-206ENST00000592001 IFT140Q96RY7 1462 aa16.14■□□□□ 0.17
PSMD8-206ENST00000592001 ARAP1Q96P48 1450 aa16.13■□□□□ 0.17
PSMD8-206ENST00000592001 TOPBP1Q92547 1522 aa16.09■□□□□ 0.17
PSMD8-206ENST00000592001 RSF1Q96T23 1441 aaPredicted RBP16.09■□□□□ 0.17
PSMD8-206ENST00000592001 CYB5RLQ6IPT4 315 aa16.07■□□□□ 0.16
PSMD8-206ENST00000592001 TARBP1Q13395 1621 aaKnown RBP16.07■□□□□ 0.16
PSMD8-206ENST00000592001 DNMBPQ6XZF7 1577 aa16.02■□□□□ 0.16
PSMD8-206ENST00000592001 TRHP20396 242 aaPredicted RBP15.99■□□□□ 0.15
PSMD8-206ENST00000592001 CCDC88BA6NC98 1476 aa15.97■□□□□ 0.15
PSMD8-206ENST00000592001 AQRO60306 1485 aaKnown RBP eCLIP15.97■□□□□ 0.159e-9■■■■■ 35.9
PSMD8-206ENST00000592001 CLASP1Q7Z460 1538 aa15.94■□□□□ 0.14
PSMD8-206ENST00000592001 ABCC8Q09428 1581 aa15.94■□□□□ 0.14
PSMD8-206ENST00000592001 POLA1P09884 1462 aaPredicted RBP15.9■□□□□ 0.14
PSMD8-206ENST00000592001 RAD54L2Q9Y4B4 1467 aa15.84■□□□□ 0.13
PSMD8-206ENST00000592001 FBLN2P98095 1184 aa15.83■□□□□ 0.12
PSMD8-206ENST00000592001 AEBP2Q6ZN18 517 aaPredicted RBP15.82■□□□□ 0.12
PSMD8-206ENST00000592001 SNAPC4Q5SXM2 1469 aa15.82■□□□□ 0.12
PSMD8-206ENST00000592001 WDR97A6NE52 1622 aa15.81■□□□□ 0.12
PSMD8-206ENST00000592001 SYNJ1O43426 1573 aa15.81■□□□□ 0.12
PSMD8-206ENST00000592001 PBRM1Q86U86 1689 aa15.78■□□□□ 0.12
PSMD8-206ENST00000592001 TDRD9Q8NDG6 1382 aaKnown RBP15.76■□□□□ 0.11
PSMD8-206ENST00000592001 MAGI1Q96QZ7 1491 aaPredicted RBP15.74■□□□□ 0.11
PSMD8-206ENST00000592001 SOGA1O94964 1423 aa15.73■□□□□ 0.11
PSMD8-206ENST00000592001 FGD5Q6ZNL6 1462 aa15.72■□□□□ 0.11
PSMD8-206ENST00000592001 KIF13AQ9H1H9 1805 aa15.71■□□□□ 0.1
PSMD8-206ENST00000592001 SYNJ2O15056 1496 aa15.7■□□□□ 0.1
PSMD8-206ENST00000592001 GAPVD1Q14C86 1478 aa15.7■□□□□ 0.1
PSMD8-206ENST00000592001 CUX1P39880 1505 aa15.69■□□□□ 0.1
PSMD8-206ENST00000592001 ERCC6L2Q5T890 1561 aa15.69■□□□□ 0.1
PSMD8-206ENST00000592001 GRIN2BQ13224 1484 aa15.67■□□□□ 0.1
PSMD8-206ENST00000592001 CHMP7Q8WUX9 453 aaPredicted RBP15.64■□□□□ 0.09
PSMD8-206ENST00000592001 ABCA5Q8WWZ7 1642 aa15.63■□□□□ 0.09
PSMD8-206ENST00000592001 SHROOM2Q13796 1616 aa15.57■□□□□ 0.08
PSMD8-206ENST00000592001 CEP170Q5SW79 1584 aa15.57■□□□□ 0.08
PSMD8-206ENST00000592001 ADAMTS12P58397 1594 aa15.53■□□□□ 0.08
PSMD8-206ENST00000592001 ABCA10Q8WWZ4 1543 aa15.51■□□□□ 0.07
PSMD8-206ENST00000592001 GRIN2AQ12879 1464 aa15.51■□□□□ 0.07
PSMD8-206ENST00000592001 NUP160Q12769 1436 aa15.48■□□□□ 0.07
PSMD8-206ENST00000592001 DIP2BQ9P265 1576 aa15.4■□□□□ 0.06
PSMD8-206ENST00000592001 TSPOAP1O95153 1857 aa15.4■□□□□ 0.06
PSMD8-206ENST00000592001 BIVM-ERCC5R4GMW8 1640 aa15.37■□□□□ 0.05
PSMD8-206ENST00000592001 ADCY10Q96PN6 1610 aa15.35■□□□□ 0.05
PSMD8-206ENST00000592001 ABCC10Q5T3U5 1492 aa15.34■□□□□ 0.05
PSMD8-206ENST00000592001 MAPKBP1O60336 1514 aa15.34■□□□□ 0.05
PSMD8-206ENST00000592001 KDM6BO15054 1643 aa15.34■□□□□ 0.05
PSMD8-206ENST00000592001 RUSC2Q8N2Y8 1516 aa15.33■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 130.7 ms