RNA–Protein interactions for RNA: ENST00000638372.1

SCARB2-208, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-208ENST00000638372 DCAF8L2P0C7V8 631 aa25.48■■□□□ 1.67
SCARB2-208ENST00000638372 NISCHQ9Y2I1 1504 aa25.15■■□□□ 1.62
SCARB2-208ENST00000638372 SUPT5HO00267 1087 aaKnown RBP24.37■■□□□ 1.49
SCARB2-208ENST00000638372 SHROOM4Q9ULL8 1493 aa24.13■■□□□ 1.45
SCARB2-208ENST00000638372 EHMT2Q96KQ7 1210 aa23.43■■□□□ 1.34
SCARB2-208ENST00000638372 FAM9AQ8IZU1 332 aaPredicted RBP22.94■■□□□ 1.26
SCARB2-208ENST00000638372 PCGF6Q9BYE7 350 aa22.65■■□□□ 1.22
SCARB2-208ENST00000638372 TTBK1Q5TCY1 1321 aaPredicted RBP22.59■■□□□ 1.21
SCARB2-208ENST00000638372 APLP2Q06481 763 aa22.54■■□□□ 1.2
SCARB2-208ENST00000638372 TRIM41Q8WV44 630 aa22.49■■□□□ 1.19
SCARB2-208ENST00000638372 RANGAP1P46060 587 aaPredicted RBP22.36■■□□□ 1.17
SCARB2-208ENST00000638372 UBTFP17480 764 aaKnown RBP22.1■■□□□ 1.13
SCARB2-208ENST00000638372 CCER1Q8TC90 406 aaPredicted RBP22■■□□□ 1.11
SCARB2-208ENST00000638372 PPARGC1BQ86YN6 1023 aaKnown RBP22■■□□□ 1.11
SCARB2-208ENST00000638372 ATP1B4Q9UN42 357 aaPredicted RBP21.96■■□□□ 1.11
SCARB2-208ENST00000638372 CHIC1Q5VXU3 224 aa21.91■■□□□ 1.1
SCARB2-208ENST00000638372 LOC105371045A0A1W2PR82 267 aa21.89■■□□□ 1.09
SCARB2-208ENST00000638372 ZEB1P37275 1124 aaPredicted RBP21.85■■□□□ 1.09
SCARB2-208ENST00000638372 PELP1Q8IZL8 1130 aaKnown RBP21.77■■□□□ 1.08
SCARB2-208ENST00000638372 TRIM26Q12899 539 aaPredicted RBP21.66■■□□□ 1.06
SCARB2-208ENST00000638372 CENPBP07199 599 aaPredicted RBP21.57■■□□□ 1.04
SCARB2-208ENST00000638372 ABCC9O60706 1549 aa21.53■■□□□ 1.04
SCARB2-208ENST00000638372 HRCP23327 699 aa21.49■■□□□ 1.03
SCARB2-208ENST00000638372 PABPN1Q86U42 306 aaKnown RBP eCLIP21.43■■□□□ 1.02
SCARB2-208ENST00000638372 YTHDC1Q96MU7 727 aaKnown RBP21.43■■□□□ 1.02
SCARB2-208ENST00000638372 ITGAEP38570 1179 aa21.41■■□□□ 1.02
SCARB2-208ENST00000638372 HNRNPUL2Q1KMD3 747 aaKnown RBP21.34■■□□□ 1.01
SCARB2-208ENST00000638372 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.17■□□□□ 0.98
SCARB2-208ENST00000638372 NEFLP07196 543 aa21.02■□□□□ 0.95
SCARB2-208ENST00000638372 POLR3GLQ9BT43 218 aa20.92■□□□□ 0.94
SCARB2-208ENST00000638372 ERICH6Q7L0X2 663 aa20.92■□□□□ 0.94
SCARB2-208ENST00000638372 MYT1LQ9UL68 1186 aa20.88■□□□□ 0.93
SCARB2-208ENST00000638372 CNGB1Q14028 1251 aaPredicted RBP20.86■□□□□ 0.93
SCARB2-208ENST00000638372 ZCCHC6Q5VYS8 1495 aaKnown RBP20.84■□□□□ 0.93
SCARB2-208ENST00000638372 FAM50AQ14320 339 aaKnown RBP20.83■□□□□ 0.93
SCARB2-208ENST00000638372 DIEXFQ68CQ4 756 aaKnown RBP20.8■□□□□ 0.92
SCARB2-208ENST00000638372 CSRNP3Q8WYN3 585 aa20.74■□□□□ 0.91
SCARB2-208ENST00000638372 SCRIBQ14160 1630 aa20.7■□□□□ 0.9
SCARB2-208ENST00000638372 NEUROD1Q13562 356 aa20.65■□□□□ 0.9
SCARB2-208ENST00000638372 P3H3Q8IVL6 736 aa20.62■□□□□ 0.89
SCARB2-208ENST00000638372 TRIM52Q96A61 297 aa20.6■□□□□ 0.89
SCARB2-208ENST00000638372 FBLN2P98095 1184 aa20.55■□□□□ 0.88
SCARB2-208ENST00000638372 ARID3CA6NKF2 412 aa20.5■□□□□ 0.87
SCARB2-208ENST00000638372 CCDC180Q9P1Z9 1646 aa20.42■□□□□ 0.86
SCARB2-208ENST00000638372 ZNF326Q5BKZ1 582 aaKnown RBP20.38■□□□□ 0.85
SCARB2-208ENST00000638372 ZNF316A6NFI3 1004 aaPredicted RBP20.37■□□□□ 0.85
SCARB2-208ENST00000638372 SLC4A1APQ9BWU0 796 aaKnown RBP20.37■□□□□ 0.85
SCARB2-208ENST00000638372 GTF3C3Q9Y5Q9 886 aa20.31■□□□□ 0.84
SCARB2-208ENST00000638372 DCAF1Q9Y4B6 1507 aa20.25■□□□□ 0.83
SCARB2-208ENST00000638372 RSF1Q96T23 1441 aaPredicted RBP20.25■□□□□ 0.83
SCARB2-208ENST00000638372 MYO15BQ96JP2 1530 aa20.24■□□□□ 0.83
SCARB2-208ENST00000638372 BCANQ96GW7 911 aa20.23■□□□□ 0.83
SCARB2-208ENST00000638372 ANP32CO43423 234 aa20.22■□□□□ 0.83
SCARB2-208ENST00000638372 ZNF777Q9ULD5 760 aaPredicted RBP20.2■□□□□ 0.82
SCARB2-208ENST00000638372 DAXXQ9UER7 740 aaPredicted RBP20.17■□□□□ 0.82
SCARB2-208ENST00000638372 MYT1Q01538 1121 aa20.07■□□□□ 0.8
SCARB2-208ENST00000638372 ACIN1Q9UKV3 1341 aaKnown RBP20.06■□□□□ 0.8
SCARB2-208ENST00000638372 CDK11AQ9UQ88 783 aaPredicted RBP20.05■□□□□ 0.8
SCARB2-208ENST00000638372 RB1CC1Q8TDY2 1594 aa20.01■□□□□ 0.79
SCARB2-208ENST00000638372 CLSPNQ9HAW4 1339 aa20■□□□□ 0.79
SCARB2-208ENST00000638372 CHIC2Q9UKJ5 165 aa20■□□□□ 0.79
SCARB2-208ENST00000638372 CLIP1P30622 1438 aa19.98■□□□□ 0.79
SCARB2-208ENST00000638372 DDX10Q13206 875 aaKnown RBP19.94■□□□□ 0.78
SCARB2-208ENST00000638372 TONSLQ96HA7 1378 aa19.94■□□□□ 0.78
SCARB2-208ENST00000638372 CECR2Q9BXF3 1484 aa19.91■□□□□ 0.78
SCARB2-208ENST00000638372 NACADO15069 1562 aa19.89■□□□□ 0.77
SCARB2-208ENST00000638372 CEP162Q5TB80 1403 aa19.88■□□□□ 0.77
SCARB2-208ENST00000638372 WRNQ14191 1432 aaPredicted RBP eCLIP19.87■□□□□ 0.77
SCARB2-208ENST00000638372 MTUS2Q5JR59 1369 aa19.83■□□□□ 0.77
SCARB2-208ENST00000638372 HIRIP3Q9BW71 556 aaPredicted RBP19.81■□□□□ 0.76
SCARB2-208ENST00000638372 GOLGA3Q08378 1498 aa19.79■□□□□ 0.76
SCARB2-208ENST00000638372 EEA1Q15075 1411 aa19.79■□□□□ 0.76
SCARB2-208ENST00000638372 BAZ1BQ9UIG0 1483 aaKnown RBP19.78■□□□□ 0.76
SCARB2-208ENST00000638372 RTL5Q5HYW3 569 aaPredicted RBP19.76■□□□□ 0.75
SCARB2-208ENST00000638372 CHMP7Q8WUX9 453 aaPredicted RBP19.76■□□□□ 0.75
SCARB2-208ENST00000638372 MIER1Q8N108 512 aa19.75■□□□□ 0.75
SCARB2-208ENST00000638372 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.74■□□□□ 0.75
SCARB2-208ENST00000638372 HNRNPUQ00839 825 aaKnown RBP eCLIP19.74■□□□□ 0.75
SCARB2-208ENST00000638372 CHGAP10645 457 aaKnown RBP19.73■□□□□ 0.75
SCARB2-208ENST00000638372 FAM9BQ8IZU0 186 aa19.72■□□□□ 0.75
SCARB2-208ENST00000638372 RRP7BPQ9NSQ0 103 aa19.72■□□□□ 0.75
SCARB2-208ENST00000638372 FKBP8Q14318 412 aa19.71■□□□□ 0.75
SCARB2-208ENST00000638372 TNIKQ9UKE5 1360 aa19.71■□□□□ 0.75
SCARB2-208ENST00000638372 TSPY4P0CV99 314 aa19.69■□□□□ 0.74
SCARB2-208ENST00000638372 TSPY10P0CW01 314 aa19.69■□□□□ 0.74
SCARB2-208ENST00000638372 BAZ1AQ9NRL2 1556 aaPredicted RBP19.68■□□□□ 0.74
SCARB2-208ENST00000638372 BCL11AQ9H165 835 aa19.68■□□□□ 0.74
SCARB2-208ENST00000638372 KDM2AQ9Y2K7 1162 aa19.67■□□□□ 0.74
SCARB2-208ENST00000638372 SALL2Q9Y467 1007 aaPredicted RBP19.66■□□□□ 0.74
SCARB2-208ENST00000638372 CANXP27824 592 aaKnown RBP19.65■□□□□ 0.74
SCARB2-208ENST00000638372 KIF27Q86VH2 1401 aa19.64■□□□□ 0.74
SCARB2-208ENST00000638372 SOGA1O94964 1423 aa19.63■□□□□ 0.73
SCARB2-208ENST00000638372 NPM1P06748 294 aaKnown RBP eCLIP19.62■□□□□ 0.73
SCARB2-208ENST00000638372 CEP164Q9UPV0 1460 aa19.61■□□□□ 0.73
SCARB2-208ENST00000638372 MROH2BQ7Z745 1585 aa19.59■□□□□ 0.73
SCARB2-208ENST00000638372 SLC24A1O60721 1099 aa19.59■□□□□ 0.73
SCARB2-208ENST00000638372 SCAF1Q9H7N4 1312 aaKnown RBP19.55■□□□□ 0.72
SCARB2-208ENST00000638372 NEFMP07197 916 aa19.55■□□□□ 0.72
SCARB2-208ENST00000638372 KCNH8Q96L42 1107 aa19.54■□□□□ 0.72
SCARB2-208ENST00000638372 TMC1Q8TDI8 760 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms