RNA–Protein interactions for RNA: ENST00000484114.2

LAMC1-205, Transcript of laminin subunit gamma 1, humanhuman

TSL 3

Gene LAMC1, Length 657 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMC1-205ENST00000484114 NISCHQ9Y2I1 1504 aa22.1■■□□□ 1.13
LAMC1-205ENST00000484114 AEBP2Q6ZN18 517 aaPredicted RBP21.3■■□□□ 1
LAMC1-205ENST00000484114 CHIC1Q5VXU3 224 aa20.93■□□□□ 0.94
LAMC1-205ENST00000484114 CCDC180Q9P1Z9 1646 aa19.59■□□□□ 0.73
LAMC1-205ENST00000484114 ABCC9O60706 1549 aa19.07■□□□□ 0.64
LAMC1-205ENST00000484114 PHF23Q9BUL5 403 aaPredicted RBP18.49■□□□□ 0.55
LAMC1-205ENST00000484114 ZCCHC6Q5VYS8 1495 aaKnown RBP18.49■□□□□ 0.55
LAMC1-205ENST00000484114 NACADO15069 1562 aa18.36■□□□□ 0.53
LAMC1-205ENST00000484114 RB1CC1Q8TDY2 1594 aa18.34■□□□□ 0.53
LAMC1-205ENST00000484114 MYO15BQ96JP2 1530 aa18.3■□□□□ 0.52
LAMC1-205ENST00000484114 DCAF1Q9Y4B6 1507 aa18.28■□□□□ 0.52
LAMC1-205ENST00000484114 DCAF8L2P0C7V8 631 aa18.25■□□□□ 0.51
LAMC1-205ENST00000484114 SENP3Q9H4L4 574 aaPredicted RBP18.14■□□□□ 0.49
LAMC1-205ENST00000484114 UNC13AQ9UPW8 1703 aa18.01■□□□□ 0.47
LAMC1-205ENST00000484114 SCRIBQ14160 1630 aa17.93■□□□□ 0.46
LAMC1-205ENST00000484114 BICRAQ9NZM4 1560 aa17.89■□□□□ 0.45
LAMC1-205ENST00000484114 PABPN1Q86U42 306 aaKnown RBP eCLIP17.81■□□□□ 0.44
LAMC1-205ENST00000484114 SHROOM4Q9ULL8 1493 aa17.63■□□□□ 0.41
LAMC1-205ENST00000484114 DNAJC5BQ9UF47 199 aa17.41■□□□□ 0.38
LAMC1-205ENST00000484114 EIF4G1Q04637 1599 aaKnown RBP17.37■□□□□ 0.37
LAMC1-205ENST00000484114 CC2D2AQ9P2K1 1620 aa17.26■□□□□ 0.35
LAMC1-205ENST00000484114 CECR2Q9BXF3 1484 aa17.24■□□□□ 0.35
LAMC1-205ENST00000484114 SMARCA4P51532 1647 aa17.14■□□□□ 0.33
LAMC1-205ENST00000484114 BAZ1AQ9NRL2 1556 aaPredicted RBP17.1■□□□□ 0.33
LAMC1-205ENST00000484114 PLPPR3Q6T4P5 718 aa17.07■□□□□ 0.32
LAMC1-205ENST00000484114 MROH2BQ7Z745 1585 aa17.06■□□□□ 0.32
LAMC1-205ENST00000484114 ATAD2BQ9ULI0 1458 aa17.01■□□□□ 0.31
LAMC1-205ENST00000484114 PEG3Q9GZU2 1588 aa16.98■□□□□ 0.31
LAMC1-205ENST00000484114 NCAPD3P42695 1498 aa16.95■□□□□ 0.3
LAMC1-205ENST00000484114 SMARCA2P51531 1590 aa16.94■□□□□ 0.3
LAMC1-205ENST00000484114 FOXD1Q16676 465 aa16.92■□□□□ 0.3
LAMC1-205ENST00000484114 HMGXB3Q12766 1538 aa16.91■□□□□ 0.3
LAMC1-205ENST00000484114 RSF1Q96T23 1441 aaPredicted RBP16.88■□□□□ 0.29
LAMC1-205ENST00000484114 WIZO95785 1651 aa16.88■□□□□ 0.29
LAMC1-205ENST00000484114 BAZ1BQ9UIG0 1483 aaKnown RBP16.85■□□□□ 0.29
LAMC1-205ENST00000484114 TOP2AP11388 1531 aaKnown RBP16.7■□□□□ 0.26
LAMC1-205ENST00000484114 NESP48681 1621 aa16.57■□□□□ 0.24
LAMC1-205ENST00000484114 CCDC88BA6NC98 1476 aa16.48■□□□□ 0.23
LAMC1-205ENST00000484114 LAMC3Q9Y6N6 1575 aa16.48■□□□□ 0.23
LAMC1-205ENST00000484114 CADPSQ9ULU8 1353 aa16.44■□□□□ 0.22
LAMC1-205ENST00000484114 SUPT5HO00267 1087 aaKnown RBP16.44■□□□□ 0.22
LAMC1-205ENST00000484114 CFTRP13569 1480 aa16.41■□□□□ 0.22
LAMC1-205ENST00000484114 ERCC6Q03468 1493 aa16.37■□□□□ 0.21
LAMC1-205ENST00000484114 KIF21AQ7Z4S6 1674 aa16.37■□□□□ 0.21
LAMC1-205ENST00000484114 THOC2Q8NI27 1593 aaKnown RBP16.33■□□□□ 0.2
LAMC1-205ENST00000484114 PDS5BQ9NTI5 1447 aa16.32■□□□□ 0.2
LAMC1-205ENST00000484114 FANCD2Q9BXW9 1451 aa16.29■□□□□ 0.2
LAMC1-205ENST00000484114 PRDM2Q13029 1718 aa16.28■□□□□ 0.2
LAMC1-205ENST00000484114 CEP164Q9UPV0 1460 aa16.24■□□□□ 0.19
LAMC1-205ENST00000484114 PPP6R1Q9UPN7 881 aa16.24■□□□□ 0.19
LAMC1-205ENST00000484114 MRC2Q9UBG0 1479 aa16.22■□□□□ 0.19
LAMC1-205ENST00000484114 ADRA2BP18089 450 aa16.21■□□□□ 0.19
LAMC1-205ENST00000484114 WDR62O43379 1518 aa16.19■□□□□ 0.18
LAMC1-205ENST00000484114 CUX2O14529 1486 aa16.18■□□□□ 0.18
LAMC1-205ENST00000484114 URB2Q14146 1524 aaKnown RBP16.16■□□□□ 0.18
LAMC1-205ENST00000484114 TOPBP1Q92547 1522 aa16.05■□□□□ 0.16
LAMC1-205ENST00000484114 DNMBPQ6XZF7 1577 aa16.04■□□□□ 0.16
LAMC1-205ENST00000484114 CUX1P39880 1505 aa16.01■□□□□ 0.15
LAMC1-205ENST00000484114 ABCC8Q09428 1581 aa15.96■□□□□ 0.15
LAMC1-205ENST00000484114 POLA1P09884 1462 aaPredicted RBP15.94■□□□□ 0.14
LAMC1-205ENST00000484114 SYNJ1O43426 1573 aa15.92■□□□□ 0.14
LAMC1-205ENST00000484114 FGD5Q6ZNL6 1462 aa15.91■□□□□ 0.14
LAMC1-205ENST00000484114 IFT140Q96RY7 1462 aa15.9■□□□□ 0.14
LAMC1-205ENST00000484114 TARBP1Q13395 1621 aaKnown RBP15.89■□□□□ 0.13
LAMC1-205ENST00000484114 WRNQ14191 1432 aaPredicted RBP eCLIP15.88■□□□□ 0.13
LAMC1-205ENST00000484114 ZNF608Q9ULD9 1512 aaPredicted RBP15.88■□□□□ 0.13
LAMC1-205ENST00000484114 BIVM-ERCC5R4GMW8 1640 aa15.87■□□□□ 0.13
LAMC1-205ENST00000484114 RAD54L2Q9Y4B4 1467 aa15.87■□□□□ 0.13
LAMC1-205ENST00000484114 TOP2BQ02880 1626 aa15.86■□□□□ 0.13
LAMC1-205ENST00000484114 EIF4G3O43432 1585 aaKnown RBP15.83■□□□□ 0.12
LAMC1-205ENST00000484114 WDR97A6NE52 1622 aa15.83■□□□□ 0.12
LAMC1-205ENST00000484114 PIAS4Q8N2W9 510 aaPredicted RBP15.82■□□□□ 0.12
LAMC1-205ENST00000484114 SOGA1O94964 1423 aa15.8■□□□□ 0.12
LAMC1-205ENST00000484114 MSH5O43196 834 aa15.78■□□□□ 0.12
LAMC1-205ENST00000484114 ABCA10Q8WWZ4 1543 aa15.75■□□□□ 0.11
LAMC1-205ENST00000484114 AQRO60306 1485 aaKnown RBP eCLIP15.75■□□□□ 0.11
LAMC1-205ENST00000484114 ABCA5Q8WWZ7 1642 aa15.72■□□□□ 0.11
LAMC1-205ENST00000484114 TDRD9Q8NDG6 1382 aaKnown RBP15.72■□□□□ 0.11
LAMC1-205ENST00000484114 GAPVD1Q14C86 1478 aa15.65■□□□□ 0.1
LAMC1-205ENST00000484114 SNAPC4Q5SXM2 1469 aa15.65■□□□□ 0.1
LAMC1-205ENST00000484114 PBRM1Q86U86 1689 aa15.64■□□□□ 0.09
LAMC1-205ENST00000484114 GRIN2BQ13224 1484 aa15.63■□□□□ 0.09
LAMC1-205ENST00000484114 MAGI1Q96QZ7 1491 aaPredicted RBP15.59■□□□□ 0.09
LAMC1-205ENST00000484114 ADAMTS12P58397 1594 aa15.58■□□□□ 0.08
LAMC1-205ENST00000484114 CHD1O14646 1710 aa15.57■□□□□ 0.08
LAMC1-205ENST00000484114 ERICH3Q5RHP9 1530 aa15.54■□□□□ 0.08
LAMC1-205ENST00000484114 SYNJ2O15056 1496 aa15.52■□□□□ 0.08
LAMC1-205ENST00000484114 KIF27Q86VH2 1401 aa15.51■□□□□ 0.07
LAMC1-205ENST00000484114 RUSC2Q8N2Y8 1516 aa15.5■□□□□ 0.07
LAMC1-205ENST00000484114 DNAJC5Q9H3Z4 198 aa15.5■□□□□ 0.07
LAMC1-205ENST00000484114 TRIM41Q8WV44 630 aa15.48■□□□□ 0.07
LAMC1-205ENST00000484114 FHAD1B1AJZ9 1412 aa15.46■□□□□ 0.07
LAMC1-205ENST00000484114 GRIN2AQ12879 1464 aa15.46■□□□□ 0.06
LAMC1-205ENST00000484114 IGF1RP08069 1367 aa15.45■□□□□ 0.06
LAMC1-205ENST00000484114 CLASP1Q7Z460 1538 aa15.44■□□□□ 0.06
LAMC1-205ENST00000484114 FBLN2P98095 1184 aa15.43■□□□□ 0.06
LAMC1-205ENST00000484114 OSCARQ8IYS5 282 aa15.43■□□□□ 0.06
LAMC1-205ENST00000484114 CEP170Q5SW79 1584 aa15.43■□□□□ 0.06
LAMC1-205ENST00000484114 CUL7Q14999 1698 aa15.42■□□□□ 0.06
LAMC1-205ENST00000484114 CHMP7Q8WUX9 453 aaPredicted RBP15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms