RNA–Protein interactions for RNA: ENST00000478737.5

SCAMP3-206, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 3

Gene SCAMP3, Length 649 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-206ENST00000478737 NISCHQ9Y2I1 1504 aa24.25■■□□□ 1.47
SCAMP3-206ENST00000478737 CCDC180Q9P1Z9 1646 aa21.47■■□□□ 1.03
SCAMP3-206ENST00000478737 ABCC9O60706 1549 aa21.11■□□□□ 0.97
SCAMP3-206ENST00000478737 NACADO15069 1562 aa20.29■□□□□ 0.84
SCAMP3-206ENST00000478737 DCAF8L2P0C7V8 631 aa20.28■□□□□ 0.84
SCAMP3-206ENST00000478737 RB1CC1Q8TDY2 1594 aa20.28■□□□□ 0.84
SCAMP3-206ENST00000478737 MYO15BQ96JP2 1530 aa20.23■□□□□ 0.83
SCAMP3-206ENST00000478737 ZCCHC6Q5VYS8 1495 aaKnown RBP20.18■□□□□ 0.82
SCAMP3-206ENST00000478737 DCAF1Q9Y4B6 1507 aa20.1■□□□□ 0.81
SCAMP3-206ENST00000478737 PABPN1Q86U42 306 aaKnown RBP eCLIP19.8■□□□□ 0.76
SCAMP3-206ENST00000478737 BICRAQ9NZM4 1560 aa19.7■□□□□ 0.74
SCAMP3-206ENST00000478737 UNC13AQ9UPW8 1703 aa19.68■□□□□ 0.74
SCAMP3-206ENST00000478737 DNAJC5BQ9UF47 199 aa19.57■□□□□ 0.72
SCAMP3-206ENST00000478737 SCRIBQ14160 1630 aa19.56■□□□□ 0.72
SCAMP3-206ENST00000478737 SHROOM4Q9ULL8 1493 aa19.54■□□□□ 0.72
SCAMP3-206ENST00000478737 EIF4G1Q04637 1599 aaKnown RBP19.16■□□□□ 0.66
SCAMP3-206ENST00000478737 CC2D2AQ9P2K1 1620 aa19.07■□□□□ 0.64
SCAMP3-206ENST00000478737 CECR2Q9BXF3 1484 aa19.01■□□□□ 0.63
SCAMP3-206ENST00000478737 NCAPD3P42695 1498 aa18.81■□□□□ 0.6
SCAMP3-206ENST00000478737 BAZ1AQ9NRL2 1556 aaPredicted RBP18.77■□□□□ 0.6
SCAMP3-206ENST00000478737 ATAD2BQ9ULI0 1458 aa18.77■□□□□ 0.59
SCAMP3-206ENST00000478737 SMARCA4P51532 1647 aa18.76■□□□□ 0.59
SCAMP3-206ENST00000478737 SMARCA2P51531 1590 aa18.68■□□□□ 0.58
SCAMP3-206ENST00000478737 MROH2BQ7Z745 1585 aa18.67■□□□□ 0.58
SCAMP3-206ENST00000478737 PEG3Q9GZU2 1588 aa18.65■□□□□ 0.58
SCAMP3-206ENST00000478737 HMGXB3Q12766 1538 aa18.61■□□□□ 0.57
SCAMP3-206ENST00000478737 BAZ1BQ9UIG0 1483 aaKnown RBP18.55■□□□□ 0.56
SCAMP3-206ENST00000478737 RSF1Q96T23 1441 aaPredicted RBP18.5■□□□□ 0.55
SCAMP3-206ENST00000478737 WIZO95785 1651 aa18.39■□□□□ 0.53
SCAMP3-206ENST00000478737 NESP48681 1621 aa18.27■□□□□ 0.51
SCAMP3-206ENST00000478737 CADPSQ9ULU8 1353 aa18.25■□□□□ 0.51
SCAMP3-206ENST00000478737 TOP2AP11388 1531 aaKnown RBP18.24■□□□□ 0.51
SCAMP3-206ENST00000478737 LAMC3Q9Y6N6 1575 aa18.2■□□□□ 0.5
SCAMP3-206ENST00000478737 ERCC6Q03468 1493 aa18.19■□□□□ 0.5
SCAMP3-206ENST00000478737 PDS5BQ9NTI5 1447 aa18.15■□□□□ 0.5
SCAMP3-206ENST00000478737 CFTRP13569 1480 aa18.11■□□□□ 0.49
SCAMP3-206ENST00000478737 CCDC88BA6NC98 1476 aa18.08■□□□□ 0.49
SCAMP3-206ENST00000478737 CUX2O14529 1486 aa18.07■□□□□ 0.48
SCAMP3-206ENST00000478737 FANCD2Q9BXW9 1451 aa17.96■□□□□ 0.47
SCAMP3-206ENST00000478737 THOC2Q8NI27 1593 aaKnown RBP17.95■□□□□ 0.46
SCAMP3-206ENST00000478737 SUPT5HO00267 1087 aaKnown RBP17.94■□□□□ 0.46
SCAMP3-206ENST00000478737 MRC2Q9UBG0 1479 aa17.93■□□□□ 0.46
SCAMP3-206ENST00000478737 KIF21AQ7Z4S6 1674 aa17.93■□□□□ 0.46
SCAMP3-206ENST00000478737 CEP164Q9UPV0 1460 aa17.92■□□□□ 0.46
SCAMP3-206ENST00000478737 WDR62O43379 1518 aa17.86■□□□□ 0.45
SCAMP3-206ENST00000478737 URB2Q14146 1524 aaKnown RBP17.78■□□□□ 0.44
SCAMP3-206ENST00000478737 PRDM2Q13029 1718 aa17.75■□□□□ 0.43
SCAMP3-206ENST00000478737 ABCC8Q09428 1581 aa17.7■□□□□ 0.42
SCAMP3-206ENST00000478737 DNAJC5Q9H3Z4 198 aa17.68■□□□□ 0.42
SCAMP3-206ENST00000478737 TOPBP1Q92547 1522 aa17.67■□□□□ 0.42
SCAMP3-206ENST00000478737 DNMBPQ6XZF7 1577 aa17.61■□□□□ 0.41
SCAMP3-206ENST00000478737 IFT140Q96RY7 1462 aa17.59■□□□□ 0.41
SCAMP3-206ENST00000478737 POLA1P09884 1462 aaPredicted RBP17.52■□□□□ 0.4
SCAMP3-206ENST00000478737 CUX1P39880 1505 aa17.5■□□□□ 0.39
SCAMP3-206ENST00000478737 ZNF608Q9ULD9 1512 aaPredicted RBP17.49■□□□□ 0.39
SCAMP3-206ENST00000478737 SOGA1O94964 1423 aa17.48■□□□□ 0.39
SCAMP3-206ENST00000478737 FGD5Q6ZNL6 1462 aa17.45■□□□□ 0.38
SCAMP3-206ENST00000478737 TARBP1Q13395 1621 aaKnown RBP17.45■□□□□ 0.38
SCAMP3-206ENST00000478737 RAD54L2Q9Y4B4 1467 aa17.44■□□□□ 0.38
SCAMP3-206ENST00000478737 AQRO60306 1485 aaKnown RBP eCLIP17.42■□□□□ 0.38
SCAMP3-206ENST00000478737 WRNQ14191 1432 aaPredicted RBP eCLIP17.41■□□□□ 0.38
SCAMP3-206ENST00000478737 TDRD9Q8NDG6 1382 aaKnown RBP17.4■□□□□ 0.38
SCAMP3-206ENST00000478737 OSCARQ8IYS5 282 aa17.39■□□□□ 0.37
SCAMP3-206ENST00000478737 EIF4G3O43432 1585 aaKnown RBP17.33■□□□□ 0.37
SCAMP3-206ENST00000478737 TOP2BQ02880 1626 aa17.32■□□□□ 0.36
SCAMP3-206ENST00000478737 WDR97A6NE52 1622 aa17.32■□□□□ 0.36
SCAMP3-206ENST00000478737 ABCA10Q8WWZ4 1543 aa17.31■□□□□ 0.36
SCAMP3-206ENST00000478737 SYNJ1O43426 1573 aa17.29■□□□□ 0.36
SCAMP3-206ENST00000478737 BIVM-ERCC5R4GMW8 1640 aa17.28■□□□□ 0.36
SCAMP3-206ENST00000478737 GRIN2BQ13224 1484 aa17.26■□□□□ 0.35
SCAMP3-206ENST00000478737 GAPVD1Q14C86 1478 aa17.25■□□□□ 0.35
SCAMP3-206ENST00000478737 MAGI1Q96QZ7 1491 aaPredicted RBP17.21■□□□□ 0.35
SCAMP3-206ENST00000478737 SNAPC4Q5SXM2 1469 aa17.2■□□□□ 0.34
SCAMP3-206ENST00000478737 FBLN2P98095 1184 aa17.19■□□□□ 0.34
SCAMP3-206ENST00000478737 CHMP7Q8WUX9 453 aaPredicted RBP17.19■□□□□ 0.34
SCAMP3-206ENST00000478737 ABCA5Q8WWZ7 1642 aa17.18■□□□□ 0.34
SCAMP3-206ENST00000478737 SYNJ2O15056 1496 aa17.16■□□□□ 0.34
SCAMP3-206ENST00000478737 ERICH3Q5RHP9 1530 aa17.09■□□□□ 0.33
SCAMP3-206ENST00000478737 FHAD1B1AJZ9 1412 aa17.08■□□□□ 0.32
SCAMP3-206ENST00000478737 CHD1O14646 1710 aa17.07■□□□□ 0.32
SCAMP3-206ENST00000478737 KIF27Q86VH2 1401 aa17.06■□□□□ 0.32
SCAMP3-206ENST00000478737 IGF1RP08069 1367 aa17.06■□□□□ 0.32
SCAMP3-206ENST00000478737 PBRM1Q86U86 1689 aa17.05■□□□□ 0.32
SCAMP3-206ENST00000478737 GRIN2AQ12879 1464 aa17.02■□□□□ 0.32
SCAMP3-206ENST00000478737 CLASP1Q7Z460 1538 aa17.01■□□□□ 0.31
SCAMP3-206ENST00000478737 ADAMTS12P58397 1594 aa17■□□□□ 0.31
SCAMP3-206ENST00000478737 NUP160Q12769 1436 aa17■□□□□ 0.31
SCAMP3-206ENST00000478737 ARHGEF11O15085 1522 aa17■□□□□ 0.31
SCAMP3-206ENST00000478737 TRIM41Q8WV44 630 aa16.99■□□□□ 0.31
SCAMP3-206ENST00000478737 RIMBP3CA6NJZ7 1639 aa16.95■□□□□ 0.3
SCAMP3-206ENST00000478737 RIMBP3BA6NNM3 1639 aa16.95■□□□□ 0.3
SCAMP3-206ENST00000478737 RIMBP3Q9UFD9 1639 aa16.95■□□□□ 0.3
SCAMP3-206ENST00000478737 CARMIL1Q5VZK9 1371 aa16.92■□□□□ 0.3
SCAMP3-206ENST00000478737 CYB5RLQ6IPT4 315 aa16.91■□□□□ 0.3
SCAMP3-206ENST00000478737 CEP170Q5SW79 1584 aa16.89■□□□□ 0.3
SCAMP3-206ENST00000478737 ARAP1Q96P48 1450 aa16.87■□□□□ 0.29
SCAMP3-206ENST00000478737 RUSC2Q8N2Y8 1516 aa16.86■□□□□ 0.29
SCAMP3-206ENST00000478737 JPH4Q96JJ6 628 aa16.86■□□□□ 0.29
SCAMP3-206ENST00000478737 CUL7Q14999 1698 aa16.85■□□□□ 0.29
SCAMP3-206ENST00000478737 KIAA0586Q9BVV6 1533 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms