RNA–Protein interactions for RNA: ENST00000494146.5

PTK7-219, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 4

Gene PTK7, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-219ENST00000494146 NISCHQ9Y2I1 1504 aa23.7■■□□□ 1.38
PTK7-219ENST00000494146 CCDC180Q9P1Z9 1646 aa20.96■□□□□ 0.95
PTK7-219ENST00000494146 ABCC9O60706 1549 aa20.46■□□□□ 0.87
PTK7-219ENST00000494146 DNAJC5BQ9UF47 199 aa20.08■□□□□ 0.81
PTK7-219ENST00000494146 DCAF8L2P0C7V8 631 aa19.86■□□□□ 0.77
PTK7-219ENST00000494146 ZCCHC6Q5VYS8 1495 aaKnown RBP19.75■□□□□ 0.75
PTK7-219ENST00000494146 NACADO15069 1562 aa19.74■□□□□ 0.75
PTK7-219ENST00000494146 RB1CC1Q8TDY2 1594 aa19.73■□□□□ 0.75
PTK7-219ENST00000494146 MYO15BQ96JP2 1530 aa19.67■□□□□ 0.74
PTK7-219ENST00000494146 DCAF1Q9Y4B6 1507 aa19.62■□□□□ 0.73
PTK7-219ENST00000494146 DNAJC5Q9H3Z4 198 aa19.37■□□□□ 0.69
PTK7-219ENST00000494146 PABPN1Q86U42 306 aaKnown RBP eCLIP19.19■□□□□ 0.66
PTK7-219ENST00000494146 UNC13AQ9UPW8 1703 aa19.16■□□□□ 0.66
PTK7-219ENST00000494146 SCRIBQ14160 1630 aa19.14■□□□□ 0.66
PTK7-219ENST00000494146 BICRAQ9NZM4 1560 aa19.07■□□□□ 0.64
PTK7-219ENST00000494146 SHROOM4Q9ULL8 1493 aa18.95■□□□□ 0.62
PTK7-219ENST00000494146 EIF4G1Q04637 1599 aaKnown RBP18.59■□□□□ 0.57
PTK7-219ENST00000494146 CC2D2AQ9P2K1 1620 aa18.48■□□□□ 0.55
PTK7-219ENST00000494146 CECR2Q9BXF3 1484 aa18.46■□□□□ 0.55
PTK7-219ENST00000494146 BAZ1AQ9NRL2 1556 aaPredicted RBP18.37■□□□□ 0.53
PTK7-219ENST00000494146 SMARCA4P51532 1647 aa18.33■□□□□ 0.52
PTK7-219ENST00000494146 MROH2BQ7Z745 1585 aa18.25■□□□□ 0.51
PTK7-219ENST00000494146 ATAD2BQ9ULI0 1458 aa18.25■□□□□ 0.51
PTK7-219ENST00000494146 NCAPD3P42695 1498 aa18.24■□□□□ 0.51
PTK7-219ENST00000494146 SMARCA2P51531 1590 aa18.22■□□□□ 0.51
PTK7-219ENST00000494146 PEG3Q9GZU2 1588 aa18.16■□□□□ 0.5
PTK7-219ENST00000494146 RSF1Q96T23 1441 aaPredicted RBP18.13■□□□□ 0.49
PTK7-219ENST00000494146 HMGXB3Q12766 1538 aa18.12■□□□□ 0.49
PTK7-219ENST00000494146 BAZ1BQ9UIG0 1483 aaKnown RBP18.11■□□□□ 0.49
PTK7-219ENST00000494146 CUX2O14529 1486 aa18.1■□□□□ 0.49
PTK7-219ENST00000494146 WIZO95785 1651 aa18.03■□□□□ 0.48
PTK7-219ENST00000494146 TOP2AP11388 1531 aaKnown RBP17.88■□□□□ 0.45
PTK7-219ENST00000494146 TRIM41Q8WV44 630 aa17.86■□□□□ 0.45
PTK7-219ENST00000494146 SUPT5HO00267 1087 aaKnown RBP17.82■□□□□ 0.44
PTK7-219ENST00000494146 CADPSQ9ULU8 1353 aa17.74■□□□□ 0.43
PTK7-219ENST00000494146 NESP48681 1621 aa17.72■□□□□ 0.43
PTK7-219ENST00000494146 LAMC3Q9Y6N6 1575 aa17.7■□□□□ 0.42
PTK7-219ENST00000494146 CCDC88BA6NC98 1476 aa17.69■□□□□ 0.42
PTK7-219ENST00000494146 ERCC6Q03468 1493 aa17.65■□□□□ 0.42
PTK7-219ENST00000494146 PDS5BQ9NTI5 1447 aa17.64■□□□□ 0.42
PTK7-219ENST00000494146 CFTRP13569 1480 aa17.63■□□□□ 0.41
PTK7-219ENST00000494146 FANCD2Q9BXW9 1451 aa17.5■□□□□ 0.39
PTK7-219ENST00000494146 CEP164Q9UPV0 1460 aa17.46■□□□□ 0.39
PTK7-219ENST00000494146 KIF21AQ7Z4S6 1674 aa17.45■□□□□ 0.38
PTK7-219ENST00000494146 MRC2Q9UBG0 1479 aa17.41■□□□□ 0.38
PTK7-219ENST00000494146 THOC2Q8NI27 1593 aaKnown RBP17.38■□□□□ 0.37
PTK7-219ENST00000494146 PRDM2Q13029 1718 aa17.38■□□□□ 0.37
PTK7-219ENST00000494146 WDR62O43379 1518 aa17.31■□□□□ 0.36
PTK7-219ENST00000494146 URB2Q14146 1524 aaKnown RBP17.29■□□□□ 0.36
PTK7-219ENST00000494146 ABCC8Q09428 1581 aa17.28■□□□□ 0.36
PTK7-219ENST00000494146 TOPBP1Q92547 1522 aa17.21■□□□□ 0.35
PTK7-219ENST00000494146 DNMBPQ6XZF7 1577 aa17.19■□□□□ 0.34
PTK7-219ENST00000494146 AEBP2Q6ZN18 517 aaPredicted RBP17.17■□□□□ 0.34
PTK7-219ENST00000494146 CUX1P39880 1505 aa17.11■□□□□ 0.33
PTK7-219ENST00000494146 IFT140Q96RY7 1462 aa17.11■□□□□ 0.33
PTK7-219ENST00000494146 WRNQ14191 1432 aaPredicted RBP eCLIP17.1■□□□□ 0.33
PTK7-219ENST00000494146 POLA1P09884 1462 aaPredicted RBP17.08■□□□□ 0.32
PTK7-219ENST00000494146 OSCARQ8IYS5 282 aa17.07■□□□□ 0.32
PTK7-219ENST00000494146 SOGA1O94964 1423 aa17.06■□□□□ 0.32
PTK7-219ENST00000494146 FGD5Q6ZNL6 1462 aa17.05■□□□□ 0.32
PTK7-219ENST00000494146 RAD54L2Q9Y4B4 1467 aa17.01■□□□□ 0.31
PTK7-219ENST00000494146 TOP2BQ02880 1626 aa17■□□□□ 0.31
PTK7-219ENST00000494146 ZNF608Q9ULD9 1512 aaPredicted RBP16.98■□□□□ 0.31
PTK7-219ENST00000494146 TARBP1Q13395 1621 aaKnown RBP16.98■□□□□ 0.31
PTK7-219ENST00000494146 SYNJ1O43426 1573 aa16.98■□□□□ 0.31
PTK7-219ENST00000494146 BIVM-ERCC5R4GMW8 1640 aa16.96■□□□□ 0.31
PTK7-219ENST00000494146 TDRD9Q8NDG6 1382 aaKnown RBP16.94■□□□□ 0.3
PTK7-219ENST00000494146 AQRO60306 1485 aaKnown RBP eCLIP16.93■□□□□ 0.33e-7■■■■■ 31
PTK7-219ENST00000494146 ABCA10Q8WWZ4 1543 aa16.91■□□□□ 0.3
PTK7-219ENST00000494146 RIMBP3CA6NJZ7 1639 aa16.9■□□□□ 0.3
PTK7-219ENST00000494146 RIMBP3BA6NNM3 1639 aa16.9■□□□□ 0.3
PTK7-219ENST00000494146 RIMBP3Q9UFD9 1639 aa16.9■□□□□ 0.3
PTK7-219ENST00000494146 EIF4G3O43432 1585 aaKnown RBP16.89■□□□□ 0.29
PTK7-219ENST00000494146 WDR97A6NE52 1622 aa16.88■□□□□ 0.29
PTK7-219ENST00000494146 GAPVD1Q14C86 1478 aa16.84■□□□□ 0.29
PTK7-219ENST00000494146 GRIN2BQ13224 1484 aa16.83■□□□□ 0.28
PTK7-219ENST00000494146 TRHP20396 242 aaPredicted RBP16.8■□□□□ 0.28
PTK7-219ENST00000494146 ABCA5Q8WWZ7 1642 aa16.78■□□□□ 0.28
PTK7-219ENST00000494146 FBLN2P98095 1184 aa16.77■□□□□ 0.28
PTK7-219ENST00000494146 SNAPC4Q5SXM2 1469 aa16.76■□□□□ 0.27
PTK7-219ENST00000494146 MAGI1Q96QZ7 1491 aaPredicted RBP16.76■□□□□ 0.27
PTK7-219ENST00000494146 CHMP7Q8WUX9 453 aaPredicted RBP16.75■□□□□ 0.27
PTK7-219ENST00000494146 KIF27Q86VH2 1401 aa16.75■□□□□ 0.27
PTK7-219ENST00000494146 ARHGEF11O15085 1522 aa16.75■□□□□ 0.27
PTK7-219ENST00000494146 ERICH3Q5RHP9 1530 aa16.7■□□□□ 0.26
PTK7-219ENST00000494146 PBRM1Q86U86 1689 aa16.7■□□□□ 0.26
PTK7-219ENST00000494146 SYNJ2O15056 1496 aa16.69■□□□□ 0.26
PTK7-219ENST00000494146 CHIC1Q5VXU3 224 aa16.69■□□□□ 0.26
PTK7-219ENST00000494146 IGF1RP08069 1367 aa16.67■□□□□ 0.26
PTK7-219ENST00000494146 FHAD1B1AJZ9 1412 aa16.67■□□□□ 0.26
PTK7-219ENST00000494146 CYB5RLQ6IPT4 315 aa16.66■□□□□ 0.26
PTK7-219ENST00000494146 ILDR1Q86SU0 546 aaPredicted RBP16.66■□□□□ 0.26
PTK7-219ENST00000494146 CHD1O14646 1710 aa16.62■□□□□ 0.25
PTK7-219ENST00000494146 ADAMTS12P58397 1594 aa16.61■□□□□ 0.25
PTK7-219ENST00000494146 GRIN2AQ12879 1464 aa16.59■□□□□ 0.25
PTK7-219ENST00000494146 CARMIL1Q5VZK9 1371 aa16.58■□□□□ 0.24
PTK7-219ENST00000494146 RUSC2Q8N2Y8 1516 aa16.58■□□□□ 0.24
PTK7-219ENST00000494146 CUL7Q14999 1698 aa16.55■□□□□ 0.24
PTK7-219ENST00000494146 CSRNP3Q8WYN3 585 aa16.52■□□□□ 0.24
PTK7-219ENST00000494146 EEA1Q15075 1411 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms