RNA–Protein interactions for RNA: ENST00000345146.6

IDH1-201, Transcript of isocitrate dehydrogenase (NADP(+)) 1, cytosolic, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IDH1, Length 2,382 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH1-201ENST00000345146 NISCHQ9Y2I1 1504 aa24.31■■□□□ 1.48
IDH1-201ENST00000345146 CCDC180Q9P1Z9 1646 aa21.36■■□□□ 1.01
IDH1-201ENST00000345146 ZCCHC6Q5VYS8 1495 aaKnown RBP20.4■□□□□ 0.86
IDH1-201ENST00000345146 ABCC9O60706 1549 aa20.23■□□□□ 0.83
IDH1-201ENST00000345146 DCAF1Q9Y4B6 1507 aa20.13■□□□□ 0.81
IDH1-201ENST00000345146 DCAF8L2P0C7V8 631 aa19.98■□□□□ 0.79
IDH1-201ENST00000345146 MYO15BQ96JP2 1530 aa19.95■□□□□ 0.78
IDH1-201ENST00000345146 SHROOM4Q9ULL8 1493 aa19.89■□□□□ 0.77
IDH1-201ENST00000345146 NACADO15069 1562 aa19.87■□□□□ 0.77
IDH1-201ENST00000345146 RB1CC1Q8TDY2 1594 aa19.73■□□□□ 0.75
IDH1-201ENST00000345146 SCRIBQ14160 1630 aa19.55■□□□□ 0.72
IDH1-201ENST00000345146 SUPT5HO00267 1087 aaKnown RBP19.55■□□□□ 0.72
IDH1-201ENST00000345146 UNC13AQ9UPW8 1703 aa19.45■□□□□ 0.7
IDH1-201ENST00000345146 BICRAQ9NZM4 1560 aa19.18■□□□□ 0.66
IDH1-201ENST00000345146 CHIC1Q5VXU3 224 aa19.16■□□□□ 0.66
IDH1-201ENST00000345146 PABPN1Q86U42 306 aaKnown RBP eCLIP18.99■□□□□ 0.63
IDH1-201ENST00000345146 CECR2Q9BXF3 1484 aa18.89■□□□□ 0.61
IDH1-201ENST00000345146 BAZ1AQ9NRL2 1556 aaPredicted RBP18.79■□□□□ 0.6
IDH1-201ENST00000345146 MROH2BQ7Z745 1585 aa18.78■□□□□ 0.6
IDH1-201ENST00000345146 RSF1Q96T23 1441 aaPredicted RBP18.77■□□□□ 0.6
IDH1-201ENST00000345146 SMARCA4P51532 1647 aa18.76■□□□□ 0.59
IDH1-201ENST00000345146 WIZO95785 1651 aa18.65■□□□□ 0.58
IDH1-201ENST00000345146 HRCP23327 699 aa18.63■□□□□ 0.57
IDH1-201ENST00000345146 EIF4G1Q04637 1599 aaKnown RBP18.59■□□□□ 0.57
IDH1-201ENST00000345146 PEG3Q9GZU2 1588 aa18.54■□□□□ 0.56
IDH1-201ENST00000345146 PCGF6Q9BYE7 350 aa18.49■□□□□ 0.55
IDH1-201ENST00000345146 LOC105371045A0A1W2PR82 267 aa18.49■□□□□ 0.55
IDH1-201ENST00000345146 ATAD2BQ9ULI0 1458 aa18.44■□□□□ 0.54
IDH1-201ENST00000345146 SMARCA2P51531 1590 aa18.44■□□□□ 0.54
IDH1-201ENST00000345146 TOP2AP11388 1531 aaKnown RBP18.43■□□□□ 0.54
IDH1-201ENST00000345146 CC2D2AQ9P2K1 1620 aa18.36■□□□□ 0.53
IDH1-201ENST00000345146 BAZ1BQ9UIG0 1483 aaKnown RBP18.32■□□□□ 0.52
IDH1-201ENST00000345146 HMGXB3Q12766 1538 aa18.31■□□□□ 0.52
IDH1-201ENST00000345146 NCAPD3P42695 1498 aa18.31■□□□□ 0.52
IDH1-201ENST00000345146 TRIM41Q8WV44 630 aa18.28■□□□□ 0.52
IDH1-201ENST00000345146 TRIM26Q12899 539 aaPredicted RBP18.25■□□□□ 0.51
IDH1-201ENST00000345146 CCDC88BA6NC98 1476 aa18.2■□□□□ 0.5
IDH1-201ENST00000345146 PPARGC1BQ86YN6 1023 aaKnown RBP18.1■□□□□ 0.49
IDH1-201ENST00000345146 FAM9AQ8IZU1 332 aaPredicted RBP18.01■□□□□ 0.47
IDH1-201ENST00000345146 DNAJC5BQ9UF47 199 aa17.96■□□□□ 0.47
IDH1-201ENST00000345146 ZEB1P37275 1124 aaPredicted RBP17.91■□□□□ 0.46
IDH1-201ENST00000345146 PRDM2Q13029 1718 aa17.9■□□□□ 0.46
IDH1-201ENST00000345146 CFTRP13569 1480 aa17.86■□□□□ 0.45
IDH1-201ENST00000345146 CADPSQ9ULU8 1353 aa17.8■□□□□ 0.44
IDH1-201ENST00000345146 ABCC8Q09428 1581 aa17.8■□□□□ 0.44
IDH1-201ENST00000345146 LAMC3Q9Y6N6 1575 aa17.75■□□□□ 0.43
IDH1-201ENST00000345146 EHMT2Q96KQ7 1210 aa17.74■□□□□ 0.43
IDH1-201ENST00000345146 NESP48681 1621 aa17.73■□□□□ 0.43
IDH1-201ENST00000345146 SYNJ1O43426 1573 aa17.66■□□□□ 0.42
IDH1-201ENST00000345146 WRNQ14191 1432 aaPredicted RBP eCLIP17.66■□□□□ 0.42
IDH1-201ENST00000345146 EEA1Q15075 1411 aa17.65■□□□□ 0.42
IDH1-201ENST00000345146 FANCD2Q9BXW9 1451 aa17.62■□□□□ 0.41
IDH1-201ENST00000345146 BIVM-ERCC5R4GMW8 1640 aa17.62■□□□□ 0.41
IDH1-201ENST00000345146 SOGA1O94964 1423 aa17.6■□□□□ 0.41
IDH1-201ENST00000345146 TOP2BQ02880 1626 aa17.6■□□□□ 0.41
IDH1-201ENST00000345146 TNIKQ9UKE5 1360 aa17.6■□□□□ 0.41
IDH1-201ENST00000345146 KIF21AQ7Z4S6 1674 aa17.59■□□□□ 0.41
IDH1-201ENST00000345146 CUX1P39880 1505 aa17.58■□□□□ 0.4
IDH1-201ENST00000345146 CEP162Q5TB80 1403 aa17.56■□□□□ 0.4
IDH1-201ENST00000345146 PDS5BQ9NTI5 1447 aa17.55■□□□□ 0.4
IDH1-201ENST00000345146 CSRNP3Q8WYN3 585 aa17.54■□□□□ 0.4
IDH1-201ENST00000345146 CEP164Q9UPV0 1460 aa17.54■□□□□ 0.4
IDH1-201ENST00000345146 RUSC2Q8N2Y8 1516 aa17.5■□□□□ 0.39
IDH1-201ENST00000345146 DNMBPQ6XZF7 1577 aa17.48■□□□□ 0.39
IDH1-201ENST00000345146 GOLGA3Q08378 1498 aa17.46■□□□□ 0.39
IDH1-201ENST00000345146 URB2Q14146 1524 aaKnown RBP17.44■□□□□ 0.38
IDH1-201ENST00000345146 TOPBP1Q92547 1522 aa17.43■□□□□ 0.38
IDH1-201ENST00000345146 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.4■□□□□ 0.38
IDH1-201ENST00000345146 FGD5Q6ZNL6 1462 aa17.39■□□□□ 0.37
IDH1-201ENST00000345146 KIF21BO75037 1637 aa17.39■□□□□ 0.37
IDH1-201ENST00000345146 CCER1Q8TC90 406 aaPredicted RBP17.38■□□□□ 0.37
IDH1-201ENST00000345146 MRC2Q9UBG0 1479 aa17.37■□□□□ 0.37
IDH1-201ENST00000345146 UBTFP17480 764 aaKnown RBP17.37■□□□□ 0.37
IDH1-201ENST00000345146 THOC2Q8NI27 1593 aaKnown RBP17.34■□□□□ 0.37
IDH1-201ENST00000345146 ERCC6Q03468 1493 aa17.34■□□□□ 0.37
IDH1-201ENST00000345146 POLA1P09884 1462 aaPredicted RBP17.33■□□□□ 0.37
IDH1-201ENST00000345146 WDR62O43379 1518 aa17.32■□□□□ 0.36
IDH1-201ENST00000345146 WDR97A6NE52 1622 aa17.29■□□□□ 0.36
IDH1-201ENST00000345146 RAD54L2Q9Y4B4 1467 aa17.25■□□□□ 0.35
IDH1-201ENST00000345146 TARBP1Q13395 1621 aaKnown RBP17.24■□□□□ 0.35
IDH1-201ENST00000345146 ABCA10Q8WWZ4 1543 aa17.24■□□□□ 0.35
IDH1-201ENST00000345146 CLIP1P30622 1438 aa17.23■□□□□ 0.35
IDH1-201ENST00000345146 CUX2O14529 1486 aa17.22■□□□□ 0.35
IDH1-201ENST00000345146 KIF27Q86VH2 1401 aa17.22■□□□□ 0.35
IDH1-201ENST00000345146 TTBK1Q5TCY1 1321 aaPredicted RBP17.21■□□□□ 0.35
IDH1-201ENST00000345146 VPS8Q8N3P4 1428 aa17.2■□□□□ 0.34
IDH1-201ENST00000345146 RAPGEF2Q9Y4G8 1499 aa17.19■□□□□ 0.34
IDH1-201ENST00000345146 ABCA5Q8WWZ7 1642 aa17.16■□□□□ 0.34
IDH1-201ENST00000345146 IFT140Q96RY7 1462 aa17.12■□□□□ 0.33
IDH1-201ENST00000345146 SCAF1Q9H7N4 1312 aaKnown RBP17.12■□□□□ 0.33
IDH1-201ENST00000345146 ERICH3Q5RHP9 1530 aa17.12■□□□□ 0.33
IDH1-201ENST00000345146 PRXQ9BXM0 1461 aa17.1■□□□□ 0.33
IDH1-201ENST00000345146 DIEXFQ68CQ4 756 aaKnown RBP17.09■□□□□ 0.33
IDH1-201ENST00000345146 PBRM1Q86U86 1689 aa17.08■□□□□ 0.32
IDH1-201ENST00000345146 IGF1RP08069 1367 aa17.07■□□□□ 0.32
IDH1-201ENST00000345146 TDRD9Q8NDG6 1382 aaKnown RBP17.06■□□□□ 0.32
IDH1-201ENST00000345146 GAPVD1Q14C86 1478 aa17.06■□□□□ 0.32
IDH1-201ENST00000345146 CUL7Q14999 1698 aa17.05■□□□□ 0.32
IDH1-201ENST00000345146 ZNF608Q9ULD9 1512 aaPredicted RBP17.04■□□□□ 0.32
IDH1-201ENST00000345146 EIF4G3O43432 1585 aaKnown RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms