RNA–Protein interactions for RNA: ENST00000461100.5

PTK7-206, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 4

Gene PTK7, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-206ENST00000461100 NISCHQ9Y2I1 1504 aa34.37■■■■□ 3.09
PTK7-206ENST00000461100 CCDC180Q9P1Z9 1646 aa30.81■■■□□ 2.52
PTK7-206ENST00000461100 ABCC9O60706 1549 aa30.74■■■□□ 2.51
PTK7-206ENST00000461100 RB1CC1Q8TDY2 1594 aa29.22■■■□□ 2.27
PTK7-206ENST00000461100 NACADO15069 1562 aa29.02■■■□□ 2.24
PTK7-206ENST00000461100 DCAF8L2P0C7V8 631 aa28.85■■■□□ 2.21
PTK7-206ENST00000461100 UNC13AQ9UPW8 1703 aa28.8■■■□□ 2.2
PTK7-206ENST00000461100 DNAJC5BQ9UF47 199 aa28.78■■■□□ 2.2
PTK7-206ENST00000461100 MYO15BQ96JP2 1530 aa28.61■■■□□ 2.17
PTK7-206ENST00000461100 PABPN1Q86U42 306 aaKnown RBP eCLIP28.6■■■□□ 2.17
PTK7-206ENST00000461100 ZCCHC6Q5VYS8 1495 aaKnown RBP28.53■■■□□ 2.16
PTK7-206ENST00000461100 BICRAQ9NZM4 1560 aa28.53■■■□□ 2.16
PTK7-206ENST00000461100 DCAF1Q9Y4B6 1507 aa28.33■■■□□ 2.13
PTK7-206ENST00000461100 SCRIBQ14160 1630 aa28.18■■■□□ 2.1
PTK7-206ENST00000461100 SHROOM4Q9ULL8 1493 aa27.89■■■□□ 2.06
PTK7-206ENST00000461100 CC2D2AQ9P2K1 1620 aa27.79■■■□□ 2.04
PTK7-206ENST00000461100 EIF4G1Q04637 1599 aaKnown RBP27.73■■■□□ 2.03
PTK7-206ENST00000461100 CECR2Q9BXF3 1484 aa27.62■■■□□ 2.01
PTK7-206ENST00000461100 SMARCA4P51532 1647 aa26.84■■□□□ 1.89
PTK7-206ENST00000461100 NCAPD3P42695 1498 aa26.78■■□□□ 1.88
PTK7-206ENST00000461100 ATAD2BQ9ULI0 1458 aa26.78■■□□□ 1.88
PTK7-206ENST00000461100 SMARCA2P51531 1590 aa26.65■■□□□ 1.86
PTK7-206ENST00000461100 HMGXB3Q12766 1538 aa26.65■■□□□ 1.86
PTK7-206ENST00000461100 BAZ1AQ9NRL2 1556 aaPredicted RBP26.63■■□□□ 1.85
PTK7-206ENST00000461100 MROH2BQ7Z745 1585 aa26.56■■□□□ 1.84
PTK7-206ENST00000461100 PEG3Q9GZU2 1588 aa26.52■■□□□ 1.84
PTK7-206ENST00000461100 NESP48681 1621 aa26.5■■□□□ 1.83
PTK7-206ENST00000461100 BAZ1BQ9UIG0 1483 aaKnown RBP26.5■■□□□ 1.83
PTK7-206ENST00000461100 ERCC6Q03468 1493 aa26.42■■□□□ 1.82
PTK7-206ENST00000461100 CUX2O14529 1486 aa26.33■■□□□ 1.81
PTK7-206ENST00000461100 WIZO95785 1651 aa26.29■■□□□ 1.8
PTK7-206ENST00000461100 THOC2Q8NI27 1593 aaKnown RBP26.22■■□□□ 1.79
PTK7-206ENST00000461100 KIF21AQ7Z4S6 1674 aa26.2■■□□□ 1.78
PTK7-206ENST00000461100 LAMC3Q9Y6N6 1575 aa26.2■■□□□ 1.78
PTK7-206ENST00000461100 DNAJC5Q9H3Z4 198 aa26.17■■□□□ 1.78
PTK7-206ENST00000461100 RSF1Q96T23 1441 aaPredicted RBP25.97■■□□□ 1.75
PTK7-206ENST00000461100 CADPSQ9ULU8 1353 aa25.96■■□□□ 1.75
PTK7-206ENST00000461100 PDS5BQ9NTI5 1447 aa25.95■■□□□ 1.74
PTK7-206ENST00000461100 TOP2AP11388 1531 aaKnown RBP25.87■■□□□ 1.73
PTK7-206ENST00000461100 MRC2Q9UBG0 1479 aa25.82■■□□□ 1.72
PTK7-206ENST00000461100 WDR62O43379 1518 aa25.8■■□□□ 1.72
PTK7-206ENST00000461100 CFTRP13569 1480 aa25.73■■□□□ 1.71
PTK7-206ENST00000461100 FANCD2Q9BXW9 1451 aa25.73■■□□□ 1.71
PTK7-206ENST00000461100 CEP164Q9UPV0 1460 aa25.73■■□□□ 1.71
PTK7-206ENST00000461100 PRDM2Q13029 1718 aa25.61■■□□□ 1.69
PTK7-206ENST00000461100 URB2Q14146 1524 aaKnown RBP25.59■■□□□ 1.69
PTK7-206ENST00000461100 CCDC88BA6NC98 1476 aa25.57■■□□□ 1.68
PTK7-206ENST00000461100 TOPBP1Q92547 1522 aa25.29■■□□□ 1.64
PTK7-206ENST00000461100 ZNF608Q9ULD9 1512 aaPredicted RBP25.27■■□□□ 1.64
PTK7-206ENST00000461100 DNMBPQ6XZF7 1577 aa25.2■■□□□ 1.62
PTK7-206ENST00000461100 IFT140Q96RY7 1462 aa25.17■■□□□ 1.62
PTK7-206ENST00000461100 EIF4G3O43432 1585 aaKnown RBP25.14■■□□□ 1.62
PTK7-206ENST00000461100 TRIM41Q8WV44 630 aa25.13■■□□□ 1.61
PTK7-206ENST00000461100 TARBP1Q13395 1621 aaKnown RBP25.12■■□□□ 1.61
PTK7-206ENST00000461100 ABCC8Q09428 1581 aa25.06■■□□□ 1.6
PTK7-206ENST00000461100 OSCARQ8IYS5 282 aa25.05■■□□□ 1.6
PTK7-206ENST00000461100 POLA1P09884 1462 aaPredicted RBP25.03■■□□□ 1.6
PTK7-206ENST00000461100 AQRO60306 1485 aaKnown RBP eCLIP25■■□□□ 1.593e-7■■■■■ 31
PTK7-206ENST00000461100 CHD1O14646 1710 aa24.98■■□□□ 1.59
PTK7-206ENST00000461100 RAD54L2Q9Y4B4 1467 aa24.98■■□□□ 1.59
PTK7-206ENST00000461100 RIMBP3CA6NJZ7 1639 aa24.97■■□□□ 1.59
PTK7-206ENST00000461100 RIMBP3BA6NNM3 1639 aa24.97■■□□□ 1.59
PTK7-206ENST00000461100 RIMBP3Q9UFD9 1639 aa24.97■■□□□ 1.59
PTK7-206ENST00000461100 CUX1P39880 1505 aa24.95■■□□□ 1.58
PTK7-206ENST00000461100 FGD5Q6ZNL6 1462 aa24.9■■□□□ 1.58
PTK7-206ENST00000461100 SUPT5HO00267 1087 aaKnown RBP24.85■■□□□ 1.57
PTK7-206ENST00000461100 ARHGEF11O15085 1522 aa24.84■■□□□ 1.57
PTK7-206ENST00000461100 SOGA1O94964 1423 aa24.84■■□□□ 1.57
PTK7-206ENST00000461100 TDRD9Q8NDG6 1382 aaKnown RBP24.83■■□□□ 1.57
PTK7-206ENST00000461100 WDR97A6NE52 1622 aa24.83■■□□□ 1.56
PTK7-206ENST00000461100 SNAPC4Q5SXM2 1469 aa24.77■■□□□ 1.56
PTK7-206ENST00000461100 PBRM1Q86U86 1689 aa24.7■■□□□ 1.54
PTK7-206ENST00000461100 FBLN2P98095 1184 aa24.69■■□□□ 1.54
PTK7-206ENST00000461100 ARAP1Q96P48 1450 aa24.64■■□□□ 1.54
PTK7-206ENST00000461100 CLASP1Q7Z460 1538 aa24.64■■□□□ 1.53
PTK7-206ENST00000461100 ABCA5Q8WWZ7 1642 aa24.63■■□□□ 1.53
PTK7-206ENST00000461100 GRIN2BQ13224 1484 aa24.62■■□□□ 1.53
PTK7-206ENST00000461100 MAGI1Q96QZ7 1491 aaPredicted RBP24.6■■□□□ 1.53
PTK7-206ENST00000461100 SYNJ1O43426 1573 aa24.59■■□□□ 1.53
PTK7-206ENST00000461100 ABCA10Q8WWZ4 1543 aa24.58■■□□□ 1.53
PTK7-206ENST00000461100 GAPVD1Q14C86 1478 aa24.57■■□□□ 1.52
PTK7-206ENST00000461100 BIVM-ERCC5R4GMW8 1640 aa24.57■■□□□ 1.52
PTK7-206ENST00000461100 CYB5RLQ6IPT4 315 aa24.54■■□□□ 1.52
PTK7-206ENST00000461100 SYNJ2O15056 1496 aa24.53■■□□□ 1.52
PTK7-206ENST00000461100 TOP2BQ02880 1626 aa24.53■■□□□ 1.52
PTK7-206ENST00000461100 CHMP7Q8WUX9 453 aaPredicted RBP24.48■■□□□ 1.51
PTK7-206ENST00000461100 WRNQ14191 1432 aaPredicted RBP eCLIP24.45■■□□□ 1.51
PTK7-206ENST00000461100 ADAMTS12P58397 1594 aa24.43■■□□□ 1.5
PTK7-206ENST00000461100 CEP170Q5SW79 1584 aa24.36■■□□□ 1.49
PTK7-206ENST00000461100 ERCC6L2Q5T890 1561 aa24.36■■□□□ 1.49
PTK7-206ENST00000461100 GRIN2AQ12879 1464 aa24.35■■□□□ 1.49
PTK7-206ENST00000461100 NUP160Q12769 1436 aa24.27■■□□□ 1.48
PTK7-206ENST00000461100 ERICH3Q5RHP9 1530 aa24.25■■□□□ 1.47
PTK7-206ENST00000461100 FHAD1B1AJZ9 1412 aa24.22■■□□□ 1.47
PTK7-206ENST00000461100 SHROOM2Q13796 1616 aa24.21■■□□□ 1.47
PTK7-206ENST00000461100 TRHP20396 242 aaPredicted RBP24.2■■□□□ 1.46
PTK7-206ENST00000461100 RUSC2Q8N2Y8 1516 aa24.1■■□□□ 1.45
PTK7-206ENST00000461100 PRG4Q92954 1404 aaPredicted RBP24■■□□□ 1.43
PTK7-206ENST00000461100 CUL7Q14999 1698 aa23.95■■□□□ 1.43
PTK7-206ENST00000461100 IGF1RP08069 1367 aa23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms