RNA–Protein interactions for RNA: ENST00000449611.6

CD99-206, Transcript of CD99 molecule (Xg blood group), humanhuman

APPRIS ALT2 TSL 5

Gene CD99, Length 604 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD99-206ENST00000449611 NISCHQ9Y2I1 1504 aa45.26■■■■■ 4.84
CD99-206ENST00000449611 CCDC180Q9P1Z9 1646 aa40.58■■■■■ 4.09
CD99-206ENST00000449611 ABCC9O60706 1549 aa40.49■■■■■ 4.07
CD99-206ENST00000449611 RB1CC1Q8TDY2 1594 aa38.63■■■■□ 3.77
CD99-206ENST00000449611 NACADO15069 1562 aa38.42■■■■□ 3.74
CD99-206ENST00000449611 DCAF8L2P0C7V8 631 aa38.09■■■■□ 3.69
CD99-206ENST00000449611 MYO15BQ96JP2 1530 aa37.99■■■■□ 3.67
CD99-206ENST00000449611 DNAJC5BQ9UF47 199 aa37.96■■■■□ 3.67
CD99-206ENST00000449611 PABPN1Q86U42 306 aaKnown RBP eCLIP37.71■■■■□ 3.634e-8■■■■■ 30
CD99-206ENST00000449611 UNC13AQ9UPW8 1703 aa37.56■■■■□ 3.6
CD99-206ENST00000449611 ZCCHC6Q5VYS8 1495 aaKnown RBP37.53■■■■□ 3.6
CD99-206ENST00000449611 DCAF1Q9Y4B6 1507 aa37.48■■■■□ 3.59
CD99-206ENST00000449611 BICRAQ9NZM4 1560 aa37.46■■■■□ 3.59
CD99-206ENST00000449611 SHROOM4Q9ULL8 1493 aa37.16■■■■□ 3.54
CD99-206ENST00000449611 SCRIBQ14160 1630 aa36.89■■■■□ 3.5
CD99-206ENST00000449611 CC2D2AQ9P2K1 1620 aa36.59■■■■□ 3.45
CD99-206ENST00000449611 EIF4G1Q04637 1599 aaKnown RBP36.56■■■■□ 3.44
CD99-206ENST00000449611 CECR2Q9BXF3 1484 aa36.54■■■■□ 3.44
CD99-206ENST00000449611 NCAPD3P42695 1498 aa35.49■■■■□ 3.27
CD99-206ENST00000449611 ATAD2BQ9ULI0 1458 aa35.34■■■■□ 3.25
CD99-206ENST00000449611 SMARCA2P51531 1590 aa35.26■■■■□ 3.24
CD99-206ENST00000449611 SMARCA4P51532 1647 aa35.25■■■■□ 3.23
CD99-206ENST00000449611 HMGXB3Q12766 1538 aa35.21■■■■□ 3.23
CD99-206ENST00000449611 BAZ1AQ9NRL2 1556 aaPredicted RBP35.15■■■■□ 3.22
CD99-206ENST00000449611 CUX2O14529 1486 aa35.02■■■■□ 3.2
CD99-206ENST00000449611 ERCC6Q03468 1493 aa35.02■■■■□ 3.2
CD99-206ENST00000449611 PEG3Q9GZU2 1588 aa35■■■■□ 3.19
CD99-206ENST00000449611 BAZ1BQ9UIG0 1483 aaKnown RBP34.99■■■■□ 3.19
CD99-206ENST00000449611 DNAJC5Q9H3Z4 198 aa34.94■■■■□ 3.18
CD99-206ENST00000449611 MROH2BQ7Z745 1585 aa34.82■■■■□ 3.16
CD99-206ENST00000449611 NESP48681 1621 aa34.77■■■■□ 3.16
CD99-206ENST00000449611 LAMC3Q9Y6N6 1575 aa34.63■■■■□ 3.13
CD99-206ENST00000449611 PDS5BQ9NTI5 1447 aa34.49■■■■□ 3.11
CD99-206ENST00000449611 THOC2Q8NI27 1593 aaKnown RBP34.45■■■■□ 3.1
CD99-206ENST00000449611 CADPSQ9ULU8 1353 aa34.4■■■■□ 3.1
CD99-206ENST00000449611 WIZO95785 1651 aa34.33■■■■□ 3.09
CD99-206ENST00000449611 KIF21AQ7Z4S6 1674 aa34.27■■■■□ 3.08
CD99-206ENST00000449611 RSF1Q96T23 1441 aaPredicted RBP34.17■■■■□ 3.06
CD99-206ENST00000449611 MRC2Q9UBG0 1479 aa34.14■■■■□ 3.06
CD99-206ENST00000449611 WDR62O43379 1518 aa34.05■■■■□ 3.04
CD99-206ENST00000449611 TOP2AP11388 1531 aaKnown RBP34.02■■■■□ 3.04
CD99-206ENST00000449611 CFTRP13569 1480 aa34.01■■■■□ 3.04
CD99-206ENST00000449611 CEP164Q9UPV0 1460 aa34.01■■■■□ 3.03
CD99-206ENST00000449611 FANCD2Q9BXW9 1451 aa33.96■■■■□ 3.03
CD99-206ENST00000449611 URB2Q14146 1524 aaKnown RBP33.65■■■□□ 2.98
CD99-206ENST00000449611 CCDC88BA6NC98 1476 aa33.62■■■□□ 2.97
CD99-206ENST00000449611 PRDM2Q13029 1718 aa33.5■■■□□ 2.95
CD99-206ENST00000449611 OSCARQ8IYS5 282 aa33.41■■■□□ 2.94
CD99-206ENST00000449611 IFT140Q96RY7 1462 aa33.37■■■□□ 2.93
CD99-206ENST00000449611 ABCC8Q09428 1581 aa33.34■■■□□ 2.93
CD99-206ENST00000449611 TOPBP1Q92547 1522 aa33.31■■■□□ 2.92
CD99-206ENST00000449611 TRIM41Q8WV44 630 aa33.3■■■□□ 2.92
CD99-206ENST00000449611 ZNF608Q9ULD9 1512 aaPredicted RBP33.22■■■□□ 2.91
CD99-206ENST00000449611 DNMBPQ6XZF7 1577 aa33.2■■■□□ 2.91
CD99-206ENST00000449611 EIF4G3O43432 1585 aaKnown RBP33.02■■■□□ 2.88
CD99-206ENST00000449611 TARBP1Q13395 1621 aaKnown RBP32.99■■■□□ 2.87
CD99-206ENST00000449611 POLA1P09884 1462 aaPredicted RBP32.98■■■□□ 2.87
CD99-206ENST00000449611 AQRO60306 1485 aaKnown RBP eCLIP32.93■■■□□ 2.867e-6■■□□□ 13.1
CD99-206ENST00000449611 RIMBP3CA6NJZ7 1639 aa32.85■■■□□ 2.85
CD99-206ENST00000449611 RIMBP3BA6NNM3 1639 aa32.85■■■□□ 2.85
CD99-206ENST00000449611 RIMBP3Q9UFD9 1639 aa32.85■■■□□ 2.85
CD99-206ENST00000449611 SOGA1O94964 1423 aa32.85■■■□□ 2.85
CD99-206ENST00000449611 RAD54L2Q9Y4B4 1467 aa32.81■■■□□ 2.84
CD99-206ENST00000449611 ARHGEF11O15085 1522 aa32.81■■■□□ 2.84
CD99-206ENST00000449611 WDR97A6NE52 1622 aa32.77■■■□□ 2.84
CD99-206ENST00000449611 FGD5Q6ZNL6 1462 aa32.76■■■□□ 2.84
CD99-206ENST00000449611 TDRD9Q8NDG6 1382 aaKnown RBP32.74■■■□□ 2.83
CD99-206ENST00000449611 CUX1P39880 1505 aa32.72■■■□□ 2.83
CD99-206ENST00000449611 FBLN2P98095 1184 aa32.69■■■□□ 2.82
CD99-206ENST00000449611 CHD1O14646 1710 aa32.68■■■□□ 2.82
CD99-206ENST00000449611 SNAPC4Q5SXM2 1469 aa32.61■■■□□ 2.81
CD99-206ENST00000449611 MAGI1Q96QZ7 1491 aaPredicted RBP32.6■■■□□ 2.81
CD99-206ENST00000449611 SUPT5HO00267 1087 aaKnown RBP32.59■■■□□ 2.81
CD99-206ENST00000449611 GRIN2BQ13224 1484 aa32.58■■■□□ 2.81
CD99-206ENST00000449611 CYB5RLQ6IPT4 315 aa32.55■■■□□ 2.8
CD99-206ENST00000449611 CHMP7Q8WUX9 453 aaPredicted RBP32.53■■■□□ 2.8
CD99-206ENST00000449611 ARAP1Q96P48 1450 aa32.48■■■□□ 2.79
CD99-206ENST00000449611 SYNJ2O15056 1496 aa32.48■■■□□ 2.79
CD99-206ENST00000449611 GAPVD1Q14C86 1478 aa32.45■■■□□ 2.79
CD99-206ENST00000449611 CLASP1Q7Z460 1538 aa32.45■■■□□ 2.78
CD99-206ENST00000449611 ABCA10Q8WWZ4 1543 aa32.45■■■□□ 2.78
CD99-206ENST00000449611 SYNJ1O43426 1573 aa32.44■■■□□ 2.78
CD99-206ENST00000449611 WRNQ14191 1432 aaPredicted RBP eCLIP32.34■■■□□ 2.77
CD99-206ENST00000449611 ABCA5Q8WWZ7 1642 aa32.33■■■□□ 2.77
CD99-206ENST00000449611 PBRM1Q86U86 1689 aa32.3■■■□□ 2.76
CD99-206ENST00000449611 TOP2BQ02880 1626 aa32.23■■■□□ 2.75
CD99-206ENST00000449611 BIVM-ERCC5R4GMW8 1640 aa32.2■■■□□ 2.75
CD99-206ENST00000449611 TRHP20396 242 aaPredicted RBP32.17■■■□□ 2.74
CD99-206ENST00000449611 GRIN2AQ12879 1464 aa32.14■■■□□ 2.74
CD99-206ENST00000449611 ADAMTS12P58397 1594 aa32.09■■■□□ 2.73
CD99-206ENST00000449611 FHAD1B1AJZ9 1412 aa32.08■■■□□ 2.73
CD99-206ENST00000449611 NUP160Q12769 1436 aa32.07■■■□□ 2.72
CD99-206ENST00000449611 ERICH3Q5RHP9 1530 aa32.05■■■□□ 2.72
CD99-206ENST00000449611 CEP170Q5SW79 1584 aa31.96■■■□□ 2.71
CD99-206ENST00000449611 SHROOM2Q13796 1616 aa31.86■■■□□ 2.69
CD99-206ENST00000449611 ERCC6L2Q5T890 1561 aa31.85■■■□□ 2.69
CD99-206ENST00000449611 JPH4Q96JJ6 628 aa31.72■■■□□ 2.67
CD99-206ENST00000449611 PRG4Q92954 1404 aaPredicted RBP31.71■■■□□ 2.67
CD99-206ENST00000449611 KIF27Q86VH2 1401 aa31.66■■■□□ 2.66
CD99-206ENST00000449611 IGF1RP08069 1367 aa31.64■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms