RNA–Protein interactions for RNA: ENST00000640634.1

SCARB2-222, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-222ENST00000640634 NISCHQ9Y2I1 1504 aa26.29■■□□□ 1.8
SCARB2-222ENST00000640634 CCDC180Q9P1Z9 1646 aa23.24■■□□□ 1.31
SCARB2-222ENST00000640634 ABCC9O60706 1549 aa22.65■■□□□ 1.22
SCARB2-222ENST00000640634 ZCCHC6Q5VYS8 1495 aaKnown RBP21.97■■□□□ 1.11
SCARB2-222ENST00000640634 DCAF8L2P0C7V8 631 aa21.92■■□□□ 1.1
SCARB2-222ENST00000640634 NACADO15069 1562 aa21.77■■□□□ 1.08
SCARB2-222ENST00000640634 RB1CC1Q8TDY2 1594 aa21.77■■□□□ 1.08
SCARB2-222ENST00000640634 DCAF1Q9Y4B6 1507 aa21.68■■□□□ 1.06
SCARB2-222ENST00000640634 MYO15BQ96JP2 1530 aa21.67■■□□□ 1.06
SCARB2-222ENST00000640634 UNC13AQ9UPW8 1703 aa21.39■■□□□ 1.02
SCARB2-222ENST00000640634 SCRIBQ14160 1630 aa21.35■■□□□ 1.01
SCARB2-222ENST00000640634 PABPN1Q86U42 306 aaKnown RBP eCLIP21.21■□□□□ 0.99
SCARB2-222ENST00000640634 BICRAQ9NZM4 1560 aa21.21■□□□□ 0.99
SCARB2-222ENST00000640634 SHROOM4Q9ULL8 1493 aa21.04■□□□□ 0.96
SCARB2-222ENST00000640634 DNAJC5BQ9UF47 199 aa20.63■□□□□ 0.89
SCARB2-222ENST00000640634 EIF4G1Q04637 1599 aaKnown RBP20.6■□□□□ 0.89
SCARB2-222ENST00000640634 CHIC1Q5VXU3 224 aa20.55■□□□□ 0.88
SCARB2-222ENST00000640634 CECR2Q9BXF3 1484 aa20.55■□□□□ 0.88
SCARB2-222ENST00000640634 CC2D2AQ9P2K1 1620 aa20.47■□□□□ 0.87
SCARB2-222ENST00000640634 SMARCA4P51532 1647 aa20.38■□□□□ 0.85
SCARB2-222ENST00000640634 MROH2BQ7Z745 1585 aa20.34■□□□□ 0.85
SCARB2-222ENST00000640634 BAZ1AQ9NRL2 1556 aaPredicted RBP20.34■□□□□ 0.85
SCARB2-222ENST00000640634 ATAD2BQ9ULI0 1458 aa20.2■□□□□ 0.82
SCARB2-222ENST00000640634 RSF1Q96T23 1441 aaPredicted RBP20.14■□□□□ 0.82
SCARB2-222ENST00000640634 WIZO95785 1651 aa20.14■□□□□ 0.81
SCARB2-222ENST00000640634 SMARCA2P51531 1590 aa20.13■□□□□ 0.81
SCARB2-222ENST00000640634 PEG3Q9GZU2 1588 aa20.12■□□□□ 0.81
SCARB2-222ENST00000640634 NCAPD3P42695 1498 aa20.11■□□□□ 0.81
SCARB2-222ENST00000640634 HMGXB3Q12766 1538 aa20.04■□□□□ 0.8
SCARB2-222ENST00000640634 BAZ1BQ9UIG0 1483 aaKnown RBP20.04■□□□□ 0.8
SCARB2-222ENST00000640634 TOP2AP11388 1531 aaKnown RBP19.87■□□□□ 0.77
SCARB2-222ENST00000640634 SUPT5HO00267 1087 aaKnown RBP19.83■□□□□ 0.77
SCARB2-222ENST00000640634 NESP48681 1621 aa19.7■□□□□ 0.74
SCARB2-222ENST00000640634 CCDC88BA6NC98 1476 aa19.66■□□□□ 0.74
SCARB2-222ENST00000640634 LAMC3Q9Y6N6 1575 aa19.54■□□□□ 0.72
SCARB2-222ENST00000640634 CADPSQ9ULU8 1353 aa19.54■□□□□ 0.72
SCARB2-222ENST00000640634 CFTRP13569 1480 aa19.49■□□□□ 0.71
SCARB2-222ENST00000640634 KIF21AQ7Z4S6 1674 aa19.45■□□□□ 0.7
SCARB2-222ENST00000640634 ERCC6Q03468 1493 aa19.44■□□□□ 0.7
SCARB2-222ENST00000640634 PDS5BQ9NTI5 1447 aa19.38■□□□□ 0.69
SCARB2-222ENST00000640634 FANCD2Q9BXW9 1451 aa19.36■□□□□ 0.69
SCARB2-222ENST00000640634 PRDM2Q13029 1718 aa19.36■□□□□ 0.69
SCARB2-222ENST00000640634 THOC2Q8NI27 1593 aaKnown RBP19.31■□□□□ 0.68
SCARB2-222ENST00000640634 CEP164Q9UPV0 1460 aa19.3■□□□□ 0.68
SCARB2-222ENST00000640634 AEBP2Q6ZN18 517 aaPredicted RBP19.25■□□□□ 0.67
SCARB2-222ENST00000640634 MRC2Q9UBG0 1479 aa19.22■□□□□ 0.67
SCARB2-222ENST00000640634 URB2Q14146 1524 aaKnown RBP19.19■□□□□ 0.66
SCARB2-222ENST00000640634 WDR62O43379 1518 aa19.17■□□□□ 0.66
SCARB2-222ENST00000640634 SLC24A1O60721 1099 aa19.11■□□□□ 0.65
SCARB2-222ENST00000640634 CUX2O14529 1486 aa19.1■□□□□ 0.65
SCARB2-222ENST00000640634 ABCC8Q09428 1581 aa19.09■□□□□ 0.65
SCARB2-222ENST00000640634 TOPBP1Q92547 1522 aa19.08■□□□□ 0.65
SCARB2-222ENST00000640634 CUX1P39880 1505 aa19.06■□□□□ 0.64
SCARB2-222ENST00000640634 DNMBPQ6XZF7 1577 aa19.06■□□□□ 0.64
SCARB2-222ENST00000640634 SYNJ1O43426 1573 aa18.99■□□□□ 0.63
SCARB2-222ENST00000640634 WRNQ14191 1432 aaPredicted RBP eCLIP18.96■□□□□ 0.63
SCARB2-222ENST00000640634 POLA1P09884 1462 aaPredicted RBP18.95■□□□□ 0.62
SCARB2-222ENST00000640634 FGD5Q6ZNL6 1462 aa18.94■□□□□ 0.62
SCARB2-222ENST00000640634 RAD54L2Q9Y4B4 1467 aa18.91■□□□□ 0.62
SCARB2-222ENST00000640634 TOP2BQ02880 1626 aa18.9■□□□□ 0.62
SCARB2-222ENST00000640634 BIVM-ERCC5R4GMW8 1640 aa18.9■□□□□ 0.62
SCARB2-222ENST00000640634 TARBP1Q13395 1621 aaKnown RBP18.88■□□□□ 0.61
SCARB2-222ENST00000640634 ZNF608Q9ULD9 1512 aaPredicted RBP18.87■□□□□ 0.61
SCARB2-222ENST00000640634 IFT140Q96RY7 1462 aa18.85■□□□□ 0.61
SCARB2-222ENST00000640634 SOGA1O94964 1423 aa18.83■□□□□ 0.6
SCARB2-222ENST00000640634 WDR97A6NE52 1622 aa18.78■□□□□ 0.6
SCARB2-222ENST00000640634 EIF4G3O43432 1585 aaKnown RBP18.78■□□□□ 0.6
SCARB2-222ENST00000640634 TDRD9Q8NDG6 1382 aaKnown RBP18.76■□□□□ 0.59
SCARB2-222ENST00000640634 AQRO60306 1485 aaKnown RBP eCLIP18.76■□□□□ 0.59
SCARB2-222ENST00000640634 ABCA10Q8WWZ4 1543 aa18.71■□□□□ 0.59
SCARB2-222ENST00000640634 ABCA5Q8WWZ7 1642 aa18.67■□□□□ 0.58
SCARB2-222ENST00000640634 TRIM41Q8WV44 630 aa18.64■□□□□ 0.57
SCARB2-222ENST00000640634 GAPVD1Q14C86 1478 aa18.62■□□□□ 0.57
SCARB2-222ENST00000640634 PBRM1Q86U86 1689 aa18.61■□□□□ 0.57
SCARB2-222ENST00000640634 EHMT2Q96KQ7 1210 aa18.6■□□□□ 0.57
SCARB2-222ENST00000640634 SNAPC4Q5SXM2 1469 aa18.59■□□□□ 0.57
SCARB2-222ENST00000640634 GRIN2BQ13224 1484 aa18.57■□□□□ 0.56
SCARB2-222ENST00000640634 RUSC2Q8N2Y8 1516 aa18.56■□□□□ 0.56
SCARB2-222ENST00000640634 KIF27Q86VH2 1401 aa18.51■□□□□ 0.55
SCARB2-222ENST00000640634 CHD1O14646 1710 aa18.5■□□□□ 0.55
SCARB2-222ENST00000640634 MAGI1Q96QZ7 1491 aaPredicted RBP18.48■□□□□ 0.55
SCARB2-222ENST00000640634 ADAMTS12P58397 1594 aa18.48■□□□□ 0.55
SCARB2-222ENST00000640634 FBLN2P98095 1184 aa18.47■□□□□ 0.55
SCARB2-222ENST00000640634 ERICH3Q5RHP9 1530 aa18.47■□□□□ 0.55
SCARB2-222ENST00000640634 IGF1RP08069 1367 aa18.44■□□□□ 0.54
SCARB2-222ENST00000640634 SYNJ2O15056 1496 aa18.43■□□□□ 0.54
SCARB2-222ENST00000640634 DNAJC5Q9H3Z4 198 aa18.4■□□□□ 0.54
SCARB2-222ENST00000640634 FHAD1B1AJZ9 1412 aa18.39■□□□□ 0.53
SCARB2-222ENST00000640634 CHMP7Q8WUX9 453 aaPredicted RBP18.39■□□□□ 0.53
SCARB2-222ENST00000640634 GRIN2AQ12879 1464 aa18.37■□□□□ 0.53
SCARB2-222ENST00000640634 FAM9AQ8IZU1 332 aaPredicted RBP18.37■□□□□ 0.53
SCARB2-222ENST00000640634 CUL7Q14999 1698 aa18.36■□□□□ 0.53
SCARB2-222ENST00000640634 OSCARQ8IYS5 282 aa18.34■□□□□ 0.53
SCARB2-222ENST00000640634 CEP170Q5SW79 1584 aa18.32■□□□□ 0.52
SCARB2-222ENST00000640634 CARMIL1Q5VZK9 1371 aa18.31■□□□□ 0.52
SCARB2-222ENST00000640634 PHF23Q9BUL5 403 aaPredicted RBP18.29■□□□□ 0.52
SCARB2-222ENST00000640634 CLASP1Q7Z460 1538 aa18.27■□□□□ 0.52
SCARB2-222ENST00000640634 NUP160Q12769 1436 aa18.26■□□□□ 0.51
SCARB2-222ENST00000640634 PRXQ9BXM0 1461 aa18.25■□□□□ 0.51
SCARB2-222ENST00000640634 CSRNP3Q8WYN3 585 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 145.7 ms