Protein–RNA interactions for Protein: Q06787

FMR1, Synaptic functional regulator FMR1, humanhuman

Known RBP eCLIP

Length 632 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1Q06787 HMGCS1-201ENST00000325110 3506 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.052e-7■■■□□ 15.9
FMR1Q06787 HMGCS1-202ENST00000433297 3466 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.32e-7■■■□□ 15.9
FMR1Q06787 KDM5C-215ENST00000497995 394 ntTSL 39.09□□□□□ -0.954e-7■■■□□ 15.9
FMR1Q06787 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.035e-6■■■□□ 15.9
FMR1Q06787 SFT2D1-202ENST00000478705 659 ntTSL 221.44■■□□□ 1.025e-6■■■□□ 15.9
FMR1Q06787 SFT2D1-204ENST00000487841 2576 ntTSL 1 (best)14.66□□□□□ -0.065e-6■■■□□ 15.9
FMR1Q06787 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.825e-7■■■□□ 15.9
FMR1Q06787 PHGDH-205ENST00000482968 1754 ntTSL 217.55■□□□□ 0.41e-7■■■□□ 15.9
FMR1Q06787 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.482e-7■■■□□ 15.9
FMR1Q06787 MARS-202ENST00000447721 1328 ntTSL 223.68■■□□□ 1.381e-7■■■□□ 15.9
FMR1Q06787 UPF1-212ENST00000601689 561 ntTSL 423.76■■□□□ 1.391e-6■■■□□ 15.9
FMR1Q06787 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC15.72■□□□□ 0.113e-6■■■□□ 15.9
FMR1Q06787 RBM15-204ENST00000617047 3284 ntTSL 1 (best) BASIC15.43■□□□□ 0.063e-6■■■□□ 15.9
FMR1Q06787 RBM15-201ENST00000369784 4244 ntTSL 1 (best) BASIC14.78□□□□□ -0.043e-6■■■□□ 15.9
FMR1Q06787 RBM15-202ENST00000487146 3316 ntTSL 1 (best) BASIC14.75□□□□□ -0.053e-6■■■□□ 15.9
FMR1Q06787 RBM15-205ENST00000618772 3431 ntTSL 1 (best) BASIC14.48□□□□□ -0.093e-6■■■□□ 15.9
FMR1Q06787 NARS-205ENST00000587194 562 ntTSL 415.36■□□□□ 0.052e-6■■■□□ 15.9
FMR1Q06787 MCM5-202ENST00000382011 2402 ntTSL 2 BASIC13.61□□□□□ -0.231e-6■■■□□ 15.9
FMR1Q06787 MCM5-201ENST00000216122 3534 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.511e-6■■■□□ 15.9
FMR1Q06787 MCM6-203ENST00000492091 712 ntTSL 511.96□□□□□ -0.499e-7■■■□□ 15.9
FMR1Q06787 UBE3C-207ENST00000494532 543 ntTSL 216.43■□□□□ 0.221e-6■■■□□ 15.9
FMR1Q06787 GLB1-203ENST00000399402 2512 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.151e-6■■■□□ 15.9
FMR1Q06787 GLB1-208ENST00000446732 631 ntTSL 39.21□□□□□ -0.941e-6■■■□□ 15.9
FMR1Q06787 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.059e-7■■■□□ 15.8
FMR1Q06787 COPE-204ENST00000593827 601 ntTSL 324.94■■□□□ 1.586e-7■■■□□ 15.8
FMR1Q06787 COPE-208ENST00000598969 1770 ntTSL 524.42■■□□□ 1.56e-7■■■□□ 15.8
FMR1Q06787 COPE-203ENST00000351079 907 ntTSL 2 BASIC23.86■■□□□ 1.416e-7■■■□□ 15.8
FMR1Q06787 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.286e-7■■■□□ 15.8
FMR1Q06787 COPE-211ENST00000600932 1144 ntTSL 5 BASIC21.56■■□□□ 1.046e-7■■■□□ 15.8
FMR1Q06787 COPE-202ENST00000349893 948 ntTSL 2 BASIC21.08■□□□□ 0.976e-7■■■□□ 15.8
FMR1Q06787 GLB1-205ENST00000436768 558 ntTSL 329.03■■■□□ 2.244e-7■■■□□ 15.8
FMR1Q06787 KIF2C-205ENST00000455186 908 ntTSL 515.14■□□□□ 0.013e-8■■■□□ 15.8
FMR1Q06787 DDB1-221ENST00000543162 575 ntTSL 412.39□□□□□ -0.431e-7■■■□□ 15.8
FMR1Q06787 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC27.32■■□□□ 1.965e-7■■■□□ 15.8
FMR1Q06787 COPB2-210ENST00000512309 565 ntTSL 57.99□□□□□ -1.139e-7■■■□□ 15.8
FMR1Q06787 DDB1-204ENST00000535147 2789 ntTSL 211.79□□□□□ -0.523e-7■■■□□ 15.8
FMR1Q06787 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC23.11■■□□□ 1.292e-11■■■□□ 15.8
FMR1Q06787 FIS1-203ENST00000442303 631 ntTSL 3 BASIC22.06■■□□□ 1.122e-11■■■□□ 15.8
FMR1Q06787 FIS1-209ENST00000482199 731 ntTSL 322.06■■□□□ 1.122e-11■■■□□ 15.8
FMR1Q06787 FIS1-204ENST00000449367 745 ntTSL 220.28■□□□□ 0.842e-11■■■□□ 15.8
FMR1Q06787 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.982e-6■■■□□ 15.8
FMR1Q06787 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.962e-6■■■□□ 15.8
FMR1Q06787 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.72e-6■■■□□ 15.8
FMR1Q06787 AC073896.4-201ENST00000553176 403 ntTSL 2 BASIC16.9■□□□□ 0.32e-6■■■□□ 15.8
FMR1Q06787 SMARCC2-209ENST00000550164 4114 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.592e-6■■■□□ 15.8
FMR1Q06787 SMARCC2-214ENST00000552674 3730 ntTSL 210.69□□□□□ -0.72e-6■■■□□ 15.8
FMR1Q06787 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.513e-7■■■□□ 15.8
FMR1Q06787 PRRC2A-202ENST00000376033 6893 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.283e-7■■■□□ 15.8
FMR1Q06787 LONP1-208ENST00000589473 793 ntTSL 319.59■□□□□ 0.738e-7■■■□□ 15.8
FMR1Q06787 UBR4-205ENST00000417040 6175 ntTSL 512.87□□□□□ -0.353e-7■■■□□ 15.8
FMR1Q06787 ARHGEF1-213ENST00000595897 2973 ntTSL 1 (best)19.9■□□□□ 0.781e-6■■■□□ 15.8
FMR1Q06787 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC21.51■■□□□ 1.032e-6■■■□□ 15.8
FMR1Q06787 GTF3C1-201ENST00000356183 7018 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.573e-6■■■□□ 15.8
FMR1Q06787 GTF3C1-202ENST00000561623 7015 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.663e-6■■■□□ 15.8
FMR1Q06787 NOC2L-202ENST00000469563 878 ntTSL 222.42■■□□□ 1.182e-7■■■□□ 15.7
FMR1Q06787 UBE3C-205ENST00000470408 5197 ntTSL 29.95□□□□□ -0.829e-7■■■□□ 15.7
FMR1Q06787 RABL6-205ENST00000435930 3328 ntTSL 216.96■□□□□ 0.311e-7■■■□□ 15.7
FMR1Q06787 GTPBP1-212ENST00000488787 582 ntTSL 527.92■■■□□ 2.062e-10■■■□□ 15.7
FMR1Q06787 GANAB-203ENST00000524437 671 ntTSL 224.53■■□□□ 1.522e-10■■■□□ 15.7
FMR1Q06787 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.386e-8■■■□□ 15.7
FMR1Q06787 GANAB-214ENST00000534613 737 ntTSL 521.24■□□□□ 0.992e-10■■■□□ 15.7
FMR1Q06787 GANAB-206ENST00000526392 257 ntTSL 321.06■□□□□ 0.962e-10■■■□□ 15.7
FMR1Q06787 GANAB-204ENST00000525994 390 ntTSL 419.96■□□□□ 0.792e-10■■■□□ 15.7
FMR1Q06787 GANAB-205ENST00000526210 533 ntTSL 418.35■□□□□ 0.532e-10■■■□□ 15.7
FMR1Q06787 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.376e-8■■■□□ 15.7
FMR1Q06787 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.356e-8■■■□□ 15.7
FMR1Q06787 GANAB-209ENST00000529737 577 ntTSL 414.34□□□□□ -0.112e-10■■■□□ 15.7
FMR1Q06787 GANAB-213ENST00000534422 702 ntTSL 514.04□□□□□ -0.162e-10■■■□□ 15.7
FMR1Q06787 CDCA5-210ENST00000533015 563 ntTSL 214.78□□□□□ -0.043e-10■■■□□ 15.7
FMR1Q06787 CORO7-227ENST00000575714 2978 ntTSL 515.64■□□□□ 0.096e-7■■■□□ 15.7
FMR1Q06787 EDC4-211ENST00000575514 1016 ntTSL 522.57■■□□□ 1.21e-7■■■□□ 15.7
FMR1Q06787 CTNNA1-223ENST00000520520 484 ntTSL 310.35□□□□□ -0.751e-6■■■□□ 15.7
FMR1Q06787 EFTUD2-219ENST00000590977 2422 ntTSL 210.57□□□□□ -0.721e-6■■■□□ 15.7
FMR1Q06787 LARP1-215ENST00000524248 2128 ntTSL 519.16■□□□□ 0.664e-7■■■□□ 15.7
FMR1Q06787 MCM6-201ENST00000264156 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.792e-6■■■□□ 15.7
FMR1Q06787 UBA1-209ENST00000490869 917 ntTSL 213.94□□□□□ -0.189e-7■■■□□ 15.7
FMR1Q06787 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC22.79■■□□□ 1.245e-12■■■□□ 15.7
FMR1Q06787 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.725e-12■■■□□ 15.7
FMR1Q06787 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC16.15■□□□□ 0.185e-12■■■□□ 15.7
FMR1Q06787 HSPA8-222ENST00000534319 1884 ntTSL 2 BASIC14.14□□□□□ -0.155e-12■■■□□ 15.7
FMR1Q06787 HSPA8-201ENST00000227378 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.225e-12■■■□□ 15.7
FMR1Q06787 HSPA8-207ENST00000526110 1924 ntTSL 5 BASIC13.47□□□□□ -0.255e-12■■■□□ 15.7
FMR1Q06787 HSPA8-218ENST00000532636 2306 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.455e-12■■■□□ 15.7
FMR1Q06787 HSPA8-215ENST00000532091 2301 ntTSL 511.86□□□□□ -0.515e-12■■■□□ 15.7
FMR1Q06787 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC19.59■□□□□ 0.733e-6■■■□□ 15.7
FMR1Q06787 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.493e-6■■■□□ 15.7
FMR1Q06787 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.413e-6■■■□□ 15.7
FMR1Q06787 STAT5A-209ENST00000588868 3629 ntTSL 1 (best) BASIC14.11□□□□□ -0.153e-6■■■□□ 15.7
FMR1Q06787 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC26.05■■□□□ 1.765e-7■■■□□ 15.7
FMR1Q06787 TRAP1-201ENST00000246957 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.15e-7■■■□□ 15.7
FMR1Q06787 POLR2A-208ENST00000576952 532 ntTSL 219.05■□□□□ 0.641e-8■■■□□ 15.7
FMR1Q06787 CLTC-207ENST00000483176 760 ntTSL 37.83□□□□□ -1.161e-7■■■□□ 15.7
FMR1Q06787 AC079781.5-201ENST00000641390 3211 nt21■□□□□ 0.953e-6■■■□□ 15.7
FMR1Q06787 AC079781.5-202ENST00000641784 3743 ntBASIC16.52■□□□□ 0.233e-6■■■□□ 15.7
FMR1Q06787 CLTC-212ENST00000580081 575 ntTSL 410.02□□□□□ -0.812e-30■■■□□ 15.7
FMR1Q06787 GTF2I-203ENST00000443166 979 ntTSL 1 (best) BASIC16.5■□□□□ 0.231e-6■■■□□ 15.6
FMR1Q06787 PPP1R10-201ENST00000376511 4525 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.222e-6■■■□□ 15.6
FMR1Q06787 MAP4K4-220ENST00000627726 3135 ntTSL 5 BASIC10.78□□□□□ -0.681e-6■■■□□ 15.6
FMR1Q06787 MAP4K4-212ENST00000456652 3855 ntTSL 5 BASIC9.35□□□□□ -0.911e-6■■■□□ 15.6
FMR1Q06787 MAP4K4-206ENST00000413150 6958 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.021e-6■■■□□ 15.6
Retrieved 100 of 13,491 protein–RNA pairs in 118.9 ms