RNA–Protein interactions for RNA: ENST00000497995.1

KDM5C-215, Transcript of lysine demethylase 5C, humanhuman

TSL 3

Gene KDM5C, Length 394 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5C-215ENST00000497995 NISCHQ9Y2I1 1504 aa17.89■□□□□ 0.45
KDM5C-215ENST00000497995 CCDC180Q9P1Z9 1646 aa15.86■□□□□ 0.13
KDM5C-215ENST00000497995 ABCC9O60706 1549 aa15.57■□□□□ 0.08
KDM5C-215ENST00000497995 NACADO15069 1562 aa14.97□□□□□ -0.01
KDM5C-215ENST00000497995 RB1CC1Q8TDY2 1594 aa14.97□□□□□ -0.01
KDM5C-215ENST00000497995 DCAF8L2P0C7V8 631 aa14.95□□□□□ -0.02
KDM5C-215ENST00000497995 MYO15BQ96JP2 1530 aa14.91□□□□□ -0.02
KDM5C-215ENST00000497995 ZCCHC6Q5VYS8 1495 aaKnown RBP14.89□□□□□ -0.03
KDM5C-215ENST00000497995 DCAF1Q9Y4B6 1507 aa14.82□□□□□ -0.04
KDM5C-215ENST00000497995 PABPN1Q86U42 306 aaKnown RBP eCLIP14.56□□□□□ -0.08
KDM5C-215ENST00000497995 UNC13AQ9UPW8 1703 aa14.53□□□□□ -0.08
KDM5C-215ENST00000497995 BICRAQ9NZM4 1560 aa14.51□□□□□ -0.09
KDM5C-215ENST00000497995 SCRIBQ14160 1630 aa14.45□□□□□ -0.1
KDM5C-215ENST00000497995 DNAJC5BQ9UF47 199 aa14.41□□□□□ -0.1
KDM5C-215ENST00000497995 SHROOM4Q9ULL8 1493 aa14.41□□□□□ -0.1
KDM5C-215ENST00000497995 EIF4G1Q04637 1599 aaKnown RBP14.13□□□□□ -0.15
KDM5C-215ENST00000497995 CC2D2AQ9P2K1 1620 aa14.06□□□□□ -0.16
KDM5C-215ENST00000497995 CECR2Q9BXF3 1484 aa14□□□□□ -0.17
KDM5C-215ENST00000497995 BAZ1AQ9NRL2 1556 aaPredicted RBP13.86□□□□□ -0.19
KDM5C-215ENST00000497995 SMARCA4P51532 1647 aa13.85□□□□□ -0.19
KDM5C-215ENST00000497995 NCAPD3P42695 1498 aa13.84□□□□□ -0.19
KDM5C-215ENST00000497995 ATAD2BQ9ULI0 1458 aa13.83□□□□□ -0.2
KDM5C-215ENST00000497995 SMARCA2P51531 1590 aa13.79□□□□□ -0.2
KDM5C-215ENST00000497995 MROH2BQ7Z745 1585 aa13.77□□□□□ -0.21
KDM5C-215ENST00000497995 PEG3Q9GZU2 1588 aa13.75□□□□□ -0.21
KDM5C-215ENST00000497995 HMGXB3Q12766 1538 aa13.74□□□□□ -0.21
KDM5C-215ENST00000497995 BAZ1BQ9UIG0 1483 aaKnown RBP13.68□□□□□ -0.22
KDM5C-215ENST00000497995 DNAJC5Q9H3Z4 198 aa13.67□□□□□ -0.22
KDM5C-215ENST00000497995 RSF1Q96T23 1441 aaPredicted RBP13.64□□□□□ -0.23
KDM5C-215ENST00000497995 WIZO95785 1651 aa13.58□□□□□ -0.24
KDM5C-215ENST00000497995 TOP2AP11388 1531 aaKnown RBP13.47□□□□□ -0.25
KDM5C-215ENST00000497995 NESP48681 1621 aa13.46□□□□□ -0.26
KDM5C-215ENST00000497995 LAMC3Q9Y6N6 1575 aa13.44□□□□□ -0.26
KDM5C-215ENST00000497995 CADPSQ9ULU8 1353 aa13.44□□□□□ -0.26
KDM5C-215ENST00000497995 ERCC6Q03468 1493 aa13.42□□□□□ -0.26
KDM5C-215ENST00000497995 PDS5BQ9NTI5 1447 aa13.38□□□□□ -0.27
KDM5C-215ENST00000497995 CFTRP13569 1480 aa13.34□□□□□ -0.27
KDM5C-215ENST00000497995 CCDC88BA6NC98 1476 aa13.33□□□□□ -0.28
KDM5C-215ENST00000497995 CUX2O14529 1486 aa13.31□□□□□ -0.28
KDM5C-215ENST00000497995 FANCD2Q9BXW9 1451 aa13.25□□□□□ -0.29
KDM5C-215ENST00000497995 SUPT5HO00267 1087 aaKnown RBP13.25□□□□□ -0.29
KDM5C-215ENST00000497995 THOC2Q8NI27 1593 aaKnown RBP13.24□□□□□ -0.29
KDM5C-215ENST00000497995 KIF21AQ7Z4S6 1674 aa13.24□□□□□ -0.29
KDM5C-215ENST00000497995 CEP164Q9UPV0 1460 aa13.23□□□□□ -0.29
KDM5C-215ENST00000497995 MRC2Q9UBG0 1479 aa13.22□□□□□ -0.29
KDM5C-215ENST00000497995 WDR62O43379 1518 aa13.17□□□□□ -0.3
KDM5C-215ENST00000497995 PRDM2Q13029 1718 aa13.12□□□□□ -0.31
KDM5C-215ENST00000497995 URB2Q14146 1524 aaKnown RBP13.11□□□□□ -0.31
KDM5C-215ENST00000497995 ABCC8Q09428 1581 aa13.06□□□□□ -0.32
KDM5C-215ENST00000497995 TOPBP1Q92547 1522 aa13.03□□□□□ -0.32
KDM5C-215ENST00000497995 DNMBPQ6XZF7 1577 aa13□□□□□ -0.33
KDM5C-215ENST00000497995 IFT140Q96RY7 1462 aa12.97□□□□□ -0.33
KDM5C-215ENST00000497995 POLA1P09884 1462 aaPredicted RBP12.92□□□□□ -0.34
KDM5C-215ENST00000497995 CUX1P39880 1505 aa12.92□□□□□ -0.34
KDM5C-215ENST00000497995 ZNF608Q9ULD9 1512 aaPredicted RBP12.89□□□□□ -0.35
KDM5C-215ENST00000497995 SOGA1O94964 1423 aa12.88□□□□□ -0.35
KDM5C-215ENST00000497995 FGD5Q6ZNL6 1462 aa12.88□□□□□ -0.35
KDM5C-215ENST00000497995 TARBP1Q13395 1621 aaKnown RBP12.87□□□□□ -0.35
KDM5C-215ENST00000497995 RAD54L2Q9Y4B4 1467 aa12.86□□□□□ -0.35
KDM5C-215ENST00000497995 WRNQ14191 1432 aaPredicted RBP eCLIP12.85□□□□□ -0.35
KDM5C-215ENST00000497995 AQRO60306 1485 aaKnown RBP eCLIP12.83□□□□□ -0.362e-11■□□□□ 11.1
KDM5C-215ENST00000497995 TDRD9Q8NDG6 1382 aaKnown RBP12.81□□□□□ -0.36
KDM5C-215ENST00000497995 EIF4G3O43432 1585 aaKnown RBP12.8□□□□□ -0.36
KDM5C-215ENST00000497995 WDR97A6NE52 1622 aa12.79□□□□□ -0.36
KDM5C-215ENST00000497995 TOP2BQ02880 1626 aa12.79□□□□□ -0.36
KDM5C-215ENST00000497995 BIVM-ERCC5R4GMW8 1640 aa12.78□□□□□ -0.36
KDM5C-215ENST00000497995 OSCARQ8IYS5 282 aa12.78□□□□□ -0.36
KDM5C-215ENST00000497995 ABCA10Q8WWZ4 1543 aa12.78□□□□□ -0.36
KDM5C-215ENST00000497995 SYNJ1O43426 1573 aa12.77□□□□□ -0.37
KDM5C-215ENST00000497995 TRIM41Q8WV44 630 aa12.75□□□□□ -0.37
KDM5C-215ENST00000497995 GRIN2BQ13224 1484 aa12.73□□□□□ -0.37
KDM5C-215ENST00000497995 GAPVD1Q14C86 1478 aa12.72□□□□□ -0.37
KDM5C-215ENST00000497995 SNAPC4Q5SXM2 1469 aa12.7□□□□□ -0.38
KDM5C-215ENST00000497995 MAGI1Q96QZ7 1491 aaPredicted RBP12.7□□□□□ -0.38
KDM5C-215ENST00000497995 FBLN2P98095 1184 aa12.68□□□□□ -0.38
KDM5C-215ENST00000497995 ABCA5Q8WWZ7 1642 aa12.68□□□□□ -0.38
KDM5C-215ENST00000497995 CHMP7Q8WUX9 453 aaPredicted RBP12.66□□□□□ -0.38
KDM5C-215ENST00000497995 SYNJ2O15056 1496 aa12.65□□□□□ -0.38
KDM5C-215ENST00000497995 PBRM1Q86U86 1689 aa12.61□□□□□ -0.39
KDM5C-215ENST00000497995 CHD1O14646 1710 aa12.61□□□□□ -0.39
KDM5C-215ENST00000497995 ERICH3Q5RHP9 1530 aa12.61□□□□□ -0.39
KDM5C-215ENST00000497995 FHAD1B1AJZ9 1412 aa12.59□□□□□ -0.39
KDM5C-215ENST00000497995 KIF27Q86VH2 1401 aa12.59□□□□□ -0.39
KDM5C-215ENST00000497995 IGF1RP08069 1367 aa12.56□□□□□ -0.4
KDM5C-215ENST00000497995 ADAMTS12P58397 1594 aa12.56□□□□□ -0.4
KDM5C-215ENST00000497995 GRIN2AQ12879 1464 aa12.55□□□□□ -0.4
KDM5C-215ENST00000497995 CLASP1Q7Z460 1538 aa12.54□□□□□ -0.4
KDM5C-215ENST00000497995 ARHGEF11O15085 1522 aa12.53□□□□□ -0.4
KDM5C-215ENST00000497995 NUP160Q12769 1436 aa12.53□□□□□ -0.4
KDM5C-215ENST00000497995 RIMBP3CA6NJZ7 1639 aa12.5□□□□□ -0.41
KDM5C-215ENST00000497995 RIMBP3BA6NNM3 1639 aa12.5□□□□□ -0.41
KDM5C-215ENST00000497995 RIMBP3Q9UFD9 1639 aa12.5□□□□□ -0.41
KDM5C-215ENST00000497995 CARMIL1Q5VZK9 1371 aa12.47□□□□□ -0.41
KDM5C-215ENST00000497995 CEP170Q5SW79 1584 aa12.47□□□□□ -0.41
KDM5C-215ENST00000497995 CUL7Q14999 1698 aa12.45□□□□□ -0.42
KDM5C-215ENST00000497995 RUSC2Q8N2Y8 1516 aa12.44□□□□□ -0.42
KDM5C-215ENST00000497995 CYB5RLQ6IPT4 315 aa12.44□□□□□ -0.42
KDM5C-215ENST00000497995 ARAP1Q96P48 1450 aa12.43□□□□□ -0.42
KDM5C-215ENST00000497995 JPH4Q96JJ6 628 aa12.41□□□□□ -0.42
KDM5C-215ENST00000497995 KIAA0586Q9BVV6 1533 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms