RNA–Protein interactions for RNA: ENST00000575514.5

EDC4-211, Transcript of enhancer of mRNA decapping 4, humanhuman

TSL 5

Gene EDC4, Length 1,016 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC4-211ENST00000575514 NISCHQ9Y2I1 1504 aa43.89■■■■■ 4.62
EDC4-211ENST00000575514 CCDC180Q9P1Z9 1646 aa39.31■■■■□ 3.88
EDC4-211ENST00000575514 ABCC9O60706 1549 aa38.99■■■■□ 3.83
EDC4-211ENST00000575514 RB1CC1Q8TDY2 1594 aa37.26■■■■□ 3.56
EDC4-211ENST00000575514 NACADO15069 1562 aa37.08■■■■□ 3.53
EDC4-211ENST00000575514 DCAF8L2P0C7V8 631 aa36.88■■■■□ 3.49
EDC4-211ENST00000575514 MYO15BQ96JP2 1530 aa36.66■■■■□ 3.46
EDC4-211ENST00000575514 ZCCHC6Q5VYS8 1495 aaKnown RBP36.45■■■■□ 3.43
EDC4-211ENST00000575514 UNC13AQ9UPW8 1703 aa36.44■■■■□ 3.42
EDC4-211ENST00000575514 PABPN1Q86U42 306 aaKnown RBP eCLIP36.33■■■■□ 3.41
EDC4-211ENST00000575514 DNAJC5BQ9UF47 199 aa36.3■■■■□ 3.4
EDC4-211ENST00000575514 DCAF1Q9Y4B6 1507 aa36.29■■■■□ 3.4
EDC4-211ENST00000575514 BICRAQ9NZM4 1560 aa36.16■■■■□ 3.38
EDC4-211ENST00000575514 SCRIBQ14160 1630 aa35.81■■■■□ 3.32
EDC4-211ENST00000575514 SHROOM4Q9ULL8 1493 aa35.73■■■■□ 3.31
EDC4-211ENST00000575514 CC2D2AQ9P2K1 1620 aa35.26■■■■□ 3.24
EDC4-211ENST00000575514 EIF4G1Q04637 1599 aaKnown RBP35.25■■■■□ 3.23
EDC4-211ENST00000575514 CECR2Q9BXF3 1484 aa35.11■■■■□ 3.21
EDC4-211ENST00000575514 NCAPD3P42695 1498 aa34.2■■■■□ 3.07
EDC4-211ENST00000575514 SMARCA4P51532 1647 aa34.2■■■■□ 3.07
EDC4-211ENST00000575514 ATAD2BQ9ULI0 1458 aa34.14■■■■□ 3.06
EDC4-211ENST00000575514 SMARCA2P51531 1590 aa34.08■■■■□ 3.05
EDC4-211ENST00000575514 BAZ1AQ9NRL2 1556 aaPredicted RBP34.06■■■■□ 3.04
EDC4-211ENST00000575514 HMGXB3Q12766 1538 aa34■■■■□ 3.03
EDC4-211ENST00000575514 PEG3Q9GZU2 1588 aa33.87■■■■□ 3.01
EDC4-211ENST00000575514 BAZ1BQ9UIG0 1483 aaKnown RBP33.83■■■■□ 3.01
EDC4-211ENST00000575514 MROH2BQ7Z745 1585 aa33.82■■■■□ 3
EDC4-211ENST00000575514 ERCC6Q03468 1493 aa33.66■■■□□ 2.98
EDC4-211ENST00000575514 NESP48681 1621 aa33.57■■■□□ 2.97
EDC4-211ENST00000575514 CUX2O14529 1486 aa33.51■■■□□ 2.96
EDC4-211ENST00000575514 WIZO95785 1651 aa33.44■■■□□ 2.94
EDC4-211ENST00000575514 LAMC3Q9Y6N6 1575 aa33.41■■■□□ 2.94
EDC4-211ENST00000575514 THOC2Q8NI27 1593 aaKnown RBP33.21■■■□□ 2.91
EDC4-211ENST00000575514 RSF1Q96T23 1441 aaPredicted RBP33.21■■■□□ 2.91
EDC4-211ENST00000575514 PDS5BQ9NTI5 1447 aa33.19■■■□□ 2.9
EDC4-211ENST00000575514 KIF21AQ7Z4S6 1674 aa33.19■■■□□ 2.9
EDC4-211ENST00000575514 CADPSQ9ULU8 1353 aa33.17■■■□□ 2.9
EDC4-211ENST00000575514 DNAJC5Q9H3Z4 198 aa33.14■■■□□ 2.9
EDC4-211ENST00000575514 TOP2AP11388 1531 aaKnown RBP33.05■■■□□ 2.88
EDC4-211ENST00000575514 MRC2Q9UBG0 1479 aa32.9■■■□□ 2.86
EDC4-211ENST00000575514 CFTRP13569 1480 aa32.86■■■□□ 2.85
EDC4-211ENST00000575514 CEP164Q9UPV0 1460 aa32.83■■■□□ 2.85
EDC4-211ENST00000575514 WDR62O43379 1518 aa32.82■■■□□ 2.85
EDC4-211ENST00000575514 FANCD2Q9BXW9 1451 aa32.81■■■□□ 2.84
EDC4-211ENST00000575514 CCDC88BA6NC98 1476 aa32.65■■■□□ 2.82
EDC4-211ENST00000575514 PRDM2Q13029 1718 aa32.61■■■□□ 2.81
EDC4-211ENST00000575514 URB2Q14146 1524 aaKnown RBP32.52■■■□□ 2.8
EDC4-211ENST00000575514 TOPBP1Q92547 1522 aa32.22■■■□□ 2.75
EDC4-211ENST00000575514 ABCC8Q09428 1581 aa32.17■■■□□ 2.74
EDC4-211ENST00000575514 IFT140Q96RY7 1462 aa32.16■■■□□ 2.74
EDC4-211ENST00000575514 DNMBPQ6XZF7 1577 aa32.14■■■□□ 2.74
EDC4-211ENST00000575514 ZNF608Q9ULD9 1512 aaPredicted RBP32.07■■■□□ 2.72
EDC4-211ENST00000575514 OSCARQ8IYS5 282 aa31.99■■■□□ 2.71
EDC4-211ENST00000575514 EIF4G3O43432 1585 aaKnown RBP31.94■■■□□ 2.7
EDC4-211ENST00000575514 TARBP1Q13395 1621 aaKnown RBP31.93■■■□□ 2.7
EDC4-211ENST00000575514 POLA1P09884 1462 aaPredicted RBP31.91■■■□□ 2.7
EDC4-211ENST00000575514 SUPT5HO00267 1087 aaKnown RBP31.91■■■□□ 2.7
EDC4-211ENST00000575514 TRIM41Q8WV44 630 aa31.81■■■□□ 2.68
EDC4-211ENST00000575514 AQRO60306 1485 aaKnown RBP eCLIP31.8■■■□□ 2.68
EDC4-211ENST00000575514 RAD54L2Q9Y4B4 1467 aa31.78■■■□□ 2.68
EDC4-211ENST00000575514 CUX1P39880 1505 aa31.76■■■□□ 2.68
EDC4-211ENST00000575514 SOGA1O94964 1423 aa31.75■■■□□ 2.67
EDC4-211ENST00000575514 FGD5Q6ZNL6 1462 aa31.75■■■□□ 2.67
EDC4-211ENST00000575514 CHD1O14646 1710 aa31.65■■■□□ 2.66
EDC4-211ENST00000575514 TDRD9Q8NDG6 1382 aaKnown RBP31.65■■■□□ 2.66
EDC4-211ENST00000575514 WDR97A6NE52 1622 aa31.64■■■□□ 2.66
EDC4-211ENST00000575514 RIMBP3CA6NJZ7 1639 aa31.59■■■□□ 2.65
EDC4-211ENST00000575514 RIMBP3BA6NNM3 1639 aa31.59■■■□□ 2.65
EDC4-211ENST00000575514 RIMBP3Q9UFD9 1639 aa31.59■■■□□ 2.65
EDC4-211ENST00000575514 FBLN2P98095 1184 aa31.52■■■□□ 2.64
EDC4-211ENST00000575514 ARHGEF11O15085 1522 aa31.51■■■□□ 2.63
EDC4-211ENST00000575514 SNAPC4Q5SXM2 1469 aa31.51■■■□□ 2.63
EDC4-211ENST00000575514 GRIN2BQ13224 1484 aa31.46■■■□□ 2.63
EDC4-211ENST00000575514 MAGI1Q96QZ7 1491 aaPredicted RBP31.45■■■□□ 2.62
EDC4-211ENST00000575514 ABCA10Q8WWZ4 1543 aa31.41■■■□□ 2.62
EDC4-211ENST00000575514 GAPVD1Q14C86 1478 aa31.39■■■□□ 2.62
EDC4-211ENST00000575514 PBRM1Q86U86 1689 aa31.38■■■□□ 2.61
EDC4-211ENST00000575514 ABCA5Q8WWZ7 1642 aa31.36■■■□□ 2.61
EDC4-211ENST00000575514 BIVM-ERCC5R4GMW8 1640 aa31.35■■■□□ 2.61
EDC4-211ENST00000575514 CHMP7Q8WUX9 453 aaPredicted RBP31.35■■■□□ 2.61
EDC4-211ENST00000575514 TOP2BQ02880 1626 aa31.35■■■□□ 2.61
EDC4-211ENST00000575514 SYNJ2O15056 1496 aa31.33■■■□□ 2.61
EDC4-211ENST00000575514 WRNQ14191 1432 aaPredicted RBP eCLIP31.33■■■□□ 2.61
EDC4-211ENST00000575514 SYNJ1O43426 1573 aa31.31■■■□□ 2.6
EDC4-211ENST00000575514 CLASP1Q7Z460 1538 aa31.29■■■□□ 2.6
EDC4-211ENST00000575514 CYB5RLQ6IPT4 315 aa31.22■■■□□ 2.59
EDC4-211ENST00000575514 ARAP1Q96P48 1450 aa31.21■■■□□ 2.59
EDC4-211ENST00000575514 ADAMTS12P58397 1594 aa31.1■■■□□ 2.57
EDC4-211ENST00000575514 GRIN2AQ12879 1464 aa31.06■■■□□ 2.56
EDC4-211ENST00000575514 ERICH3Q5RHP9 1530 aa31.03■■■□□ 2.56
EDC4-211ENST00000575514 FHAD1B1AJZ9 1412 aa31■■■□□ 2.55
EDC4-211ENST00000575514 CEP170Q5SW79 1584 aa30.95■■■□□ 2.54
EDC4-211ENST00000575514 NUP160Q12769 1436 aa30.94■■■□□ 2.54
EDC4-211ENST00000575514 ERCC6L2Q5T890 1561 aa30.8■■■□□ 2.52
EDC4-211ENST00000575514 SHROOM2Q13796 1616 aa30.8■■■□□ 2.52
EDC4-211ENST00000575514 TRHP20396 242 aaPredicted RBP30.79■■■□□ 2.52
EDC4-211ENST00000575514 KIF27Q86VH2 1401 aa30.73■■■□□ 2.51
EDC4-211ENST00000575514 IGF1RP08069 1367 aa30.66■■■□□ 2.5
EDC4-211ENST00000575514 RUSC2Q8N2Y8 1516 aa30.66■■■□□ 2.5
EDC4-211ENST00000575514 CUL7Q14999 1698 aa30.65■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms