RNA–Protein interactions for RNA: ENST00000552674.5

SMARCC2-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 2

Gene SMARCC2, Length 3,730 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-214ENST00000552674 NISCHQ9Y2I1 1504 aa17.46■□□□□ 0.39
SMARCC2-214ENST00000552674 SUPT5HO00267 1087 aaKnown RBP16.14■□□□□ 0.17
SMARCC2-214ENST00000552674 SHROOM4Q9ULL8 1493 aa16.12■□□□□ 0.17
SMARCC2-214ENST00000552674 DCAF8L2P0C7V8 631 aa15.92■□□□□ 0.14
SMARCC2-214ENST00000552674 PCGF6Q9BYE7 350 aa15.59■□□□□ 0.09
SMARCC2-214ENST00000552674 HRCP23327 699 aa15.41■□□□□ 0.06
SMARCC2-214ENST00000552674 CHIC1Q5VXU3 224 aa15.27■□□□□ 0.04
SMARCC2-214ENST00000552674 PPARGC1BQ86YN6 1023 aaKnown RBP15.27■□□□□ 0.03
SMARCC2-214ENST00000552674 EHMT2Q96KQ7 1210 aa15.21■□□□□ 0.03
SMARCC2-214ENST00000552674 LOC105371045A0A1W2PR82 267 aa15.13■□□□□ 0.01
SMARCC2-214ENST00000552674 CCDC180Q9P1Z9 1646 aa15.1■□□□□ 0.01
SMARCC2-214ENST00000552674 FAM9AQ8IZU1 332 aaPredicted RBP15.05■□□□□ 0
SMARCC2-214ENST00000552674 TRIM26Q12899 539 aaPredicted RBP14.94□□□□□ -0.02
SMARCC2-214ENST00000552674 MYO15BQ96JP2 1530 aa14.91□□□□□ -0.02
SMARCC2-214ENST00000552674 TRIM41Q8WV44 630 aa14.84□□□□□ -0.03
SMARCC2-214ENST00000552674 ZEB1P37275 1124 aaPredicted RBP14.84□□□□□ -0.03
SMARCC2-214ENST00000552674 TTBK1Q5TCY1 1321 aaPredicted RBP14.76□□□□□ -0.05
SMARCC2-214ENST00000552674 PELP1Q8IZL8 1130 aaKnown RBP14.73□□□□□ -0.05
SMARCC2-214ENST00000552674 ZCCHC6Q5VYS8 1495 aaKnown RBP14.69□□□□□ -0.06
SMARCC2-214ENST00000552674 CCER1Q8TC90 406 aaPredicted RBP14.67□□□□□ -0.06
SMARCC2-214ENST00000552674 DCAF1Q9Y4B6 1507 aa14.58□□□□□ -0.07
SMARCC2-214ENST00000552674 CENPBP07199 599 aaPredicted RBP14.52□□□□□ -0.09
SMARCC2-214ENST00000552674 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.51□□□□□ -0.09
SMARCC2-214ENST00000552674 YTHDC1Q96MU7 727 aaKnown RBP14.43□□□□□ -0.1
SMARCC2-214ENST00000552674 SCAF1Q9H7N4 1312 aaKnown RBP14.42□□□□□ -0.1
SMARCC2-214ENST00000552674 DIEXFQ68CQ4 756 aaKnown RBP14.35□□□□□ -0.11
SMARCC2-214ENST00000552674 GTF3C3Q9Y5Q9 886 aa14.31□□□□□ -0.12
SMARCC2-214ENST00000552674 UBTFP17480 764 aaKnown RBP14.31□□□□□ -0.12
SMARCC2-214ENST00000552674 ACIN1Q9UKV3 1341 aaKnown RBP14.28□□□□□ -0.12
SMARCC2-214ENST00000552674 RANGAP1P46060 587 aaPredicted RBP14.27□□□□□ -0.12
SMARCC2-214ENST00000552674 APLP2Q06481 763 aa14.24□□□□□ -0.13
SMARCC2-214ENST00000552674 NEUROD1Q13562 356 aa14.23□□□□□ -0.13
SMARCC2-214ENST00000552674 HNRNPUL2Q1KMD3 747 aaKnown RBP14.17□□□□□ -0.14
SMARCC2-214ENST00000552674 MYT1Q01538 1121 aa14.13□□□□□ -0.15
SMARCC2-214ENST00000552674 RSF1Q96T23 1441 aaPredicted RBP14.09□□□□□ -0.15
SMARCC2-214ENST00000552674 SCRIBQ14160 1630 aa14.09□□□□□ -0.15
SMARCC2-214ENST00000552674 ZNF316A6NFI3 1004 aaPredicted RBP14.04□□□□□ -0.16
SMARCC2-214ENST00000552674 ABCC9O60706 1549 aa13.94□□□□□ -0.18
SMARCC2-214ENST00000552674 RB1CC1Q8TDY2 1594 aa13.9□□□□□ -0.18
SMARCC2-214ENST00000552674 MIER1Q8N108 512 aa13.88□□□□□ -0.19
SMARCC2-214ENST00000552674 CSRNP3Q8WYN3 585 aa13.88□□□□□ -0.19
SMARCC2-214ENST00000552674 ITGAEP38570 1179 aa13.87□□□□□ -0.19
SMARCC2-214ENST00000552674 UNC13AQ9UPW8 1703 aa13.86□□□□□ -0.19
SMARCC2-214ENST00000552674 CECR2Q9BXF3 1484 aa13.8□□□□□ -0.2
SMARCC2-214ENST00000552674 NACADO15069 1562 aa13.77□□□□□ -0.2
SMARCC2-214ENST00000552674 CEP162Q5TB80 1403 aa13.76□□□□□ -0.21
SMARCC2-214ENST00000552674 ATP1B4Q9UN42 357 aaPredicted RBP13.75□□□□□ -0.21
SMARCC2-214ENST00000552674 BCANQ96GW7 911 aa13.73□□□□□ -0.21
SMARCC2-214ENST00000552674 PABPN1Q86U42 306 aaKnown RBP eCLIP13.72□□□□□ -0.21
SMARCC2-214ENST00000552674 NEFLP07196 543 aa13.71□□□□□ -0.21
SMARCC2-214ENST00000552674 MROH2BQ7Z745 1585 aa13.68□□□□□ -0.22
SMARCC2-214ENST00000552674 SOGA1O94964 1423 aa13.64□□□□□ -0.23
SMARCC2-214ENST00000552674 TNIKQ9UKE5 1360 aa13.62□□□□□ -0.23
SMARCC2-214ENST00000552674 CCDC88BA6NC98 1476 aa13.6□□□□□ -0.23
SMARCC2-214ENST00000552674 ERICH6Q7L0X2 663 aa13.6□□□□□ -0.23
SMARCC2-214ENST00000552674 ABCC8Q09428 1581 aa13.59□□□□□ -0.23
SMARCC2-214ENST00000552674 WIZO95785 1651 aa13.57□□□□□ -0.24
SMARCC2-214ENST00000552674 CLIP1P30622 1438 aa13.55□□□□□ -0.24
SMARCC2-214ENST00000552674 GOLGA3Q08378 1498 aa13.53□□□□□ -0.24
SMARCC2-214ENST00000552674 FAM50AQ14320 339 aaKnown RBP13.51□□□□□ -0.25
SMARCC2-214ENST00000552674 BICRAQ9NZM4 1560 aa13.51□□□□□ -0.25
SMARCC2-214ENST00000552674 FKBP8Q14318 412 aa13.5□□□□□ -0.25
SMARCC2-214ENST00000552674 SUPT16HQ9Y5B9 1047 aaKnown RBP13.49□□□□□ -0.25
SMARCC2-214ENST00000552674 EEA1Q15075 1411 aa13.49□□□□□ -0.25
SMARCC2-214ENST00000552674 DDX10Q13206 875 aaKnown RBP13.48□□□□□ -0.25
SMARCC2-214ENST00000552674 WRNQ14191 1432 aaPredicted RBP eCLIP13.47□□□□□ -0.25
SMARCC2-214ENST00000552674 RUSC2Q8N2Y8 1516 aa13.46□□□□□ -0.25
SMARCC2-214ENST00000552674 CLSPNQ9HAW4 1339 aa13.45□□□□□ -0.26
SMARCC2-214ENST00000552674 BAZ1AQ9NRL2 1556 aaPredicted RBP13.44□□□□□ -0.26
SMARCC2-214ENST00000552674 HIRIP3Q9BW71 556 aaPredicted RBP13.42□□□□□ -0.26
SMARCC2-214ENST00000552674 TRIM52Q96A61 297 aa13.41□□□□□ -0.26
SMARCC2-214ENST00000552674 ANP32CO43423 234 aa13.4□□□□□ -0.26
SMARCC2-214ENST00000552674 CEP164Q9UPV0 1460 aa13.39□□□□□ -0.27
SMARCC2-214ENST00000552674 CNGB1Q14028 1251 aaPredicted RBP13.38□□□□□ -0.27
SMARCC2-214ENST00000552674 P3H3Q8IVL6 736 aa13.37□□□□□ -0.27
SMARCC2-214ENST00000552674 ANP32EQ9BTT0 268 aa13.35□□□□□ -0.27
SMARCC2-214ENST00000552674 VPS8Q8N3P4 1428 aa13.34□□□□□ -0.27
SMARCC2-214ENST00000552674 KANK4Q5T7N3 995 aaPredicted RBP13.33□□□□□ -0.28
SMARCC2-214ENST00000552674 TSHZ2Q9NRE2 1034 aa13.32□□□□□ -0.28
SMARCC2-214ENST00000552674 KCNH8Q96L42 1107 aa13.31□□□□□ -0.28
SMARCC2-214ENST00000552674 EIF4G1Q04637 1599 aaKnown RBP13.31□□□□□ -0.28
SMARCC2-214ENST00000552674 TOP2AP11388 1531 aaKnown RBP13.28□□□□□ -0.28
SMARCC2-214ENST00000552674 SIN3AQ96ST3 1273 aa13.27□□□□□ -0.28
SMARCC2-214ENST00000552674 POLR3GLQ9BT43 218 aa13.27□□□□□ -0.28
SMARCC2-214ENST00000552674 IRX6P78412 446 aaPredicted RBP13.27□□□□□ -0.29
SMARCC2-214ENST00000552674 CDK11AQ9UQ88 783 aaPredicted RBP13.27□□□□□ -0.29
SMARCC2-214ENST00000552674 HNRNPUQ00839 825 aaKnown RBP eCLIP13.25□□□□□ -0.29
SMARCC2-214ENST00000552674 DHX57Q6P158 1386 aaKnown RBP13.24□□□□□ -0.29
SMARCC2-214ENST00000552674 RAPGEF2Q9Y4G8 1499 aa13.23□□□□□ -0.29
SMARCC2-214ENST00000552674 PEG3Q9GZU2 1588 aa13.23□□□□□ -0.29
SMARCC2-214ENST00000552674 SMARCA4P51532 1647 aa13.22□□□□□ -0.29
SMARCC2-214ENST00000552674 SMARCA2P51531 1590 aa13.19□□□□□ -0.3
SMARCC2-214ENST00000552674 CCNB3Q8WWL7 1395 aa13.19□□□□□ -0.3
SMARCC2-214ENST00000552674 TONSLQ96HA7 1378 aa13.18□□□□□ -0.3
SMARCC2-214ENST00000552674 RBM19Q9Y4C8 960 aaKnown RBP13.16□□□□□ -0.3
SMARCC2-214ENST00000552674 BCL11AQ9H165 835 aa13.15□□□□□ -0.3
SMARCC2-214ENST00000552674 BAZ1BQ9UIG0 1483 aaKnown RBP13.13□□□□□ -0.31
SMARCC2-214ENST00000552674 FAM9BQ8IZU0 186 aa13.12□□□□□ -0.31
SMARCC2-214ENST00000552674 RAB3GAP2Q9H2M9 1393 aa13.12□□□□□ -0.31
SMARCC2-214ENST00000552674 KIF27Q86VH2 1401 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms