RNA–Protein interactions for RNA: ENST00000576952.1

POLR2A-208, Transcript of RNA polymerase II subunit A, humanhuman

TSL 2

Gene POLR2A, Length 532 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-208ENST00000576952 NISCHQ9Y2I1 1504 aa37.38■■■■□ 3.57
POLR2A-208ENST00000576952 CCDC180Q9P1Z9 1646 aa33.35■■■□□ 2.93
POLR2A-208ENST00000576952 ABCC9O60706 1549 aa32.66■■■□□ 2.82
POLR2A-208ENST00000576952 RB1CC1Q8TDY2 1594 aa31.37■■■□□ 2.61
POLR2A-208ENST00000576952 NACADO15069 1562 aa31.29■■■□□ 2.6
POLR2A-208ENST00000576952 DCAF8L2P0C7V8 631 aa31.25■■■□□ 2.59
POLR2A-208ENST00000576952 ZCCHC6Q5VYS8 1495 aaKnown RBP31.12■■■□□ 2.57
POLR2A-208ENST00000576952 MYO15BQ96JP2 1530 aa31.03■■■□□ 2.56
POLR2A-208ENST00000576952 DCAF1Q9Y4B6 1507 aa30.88■■■□□ 2.53
POLR2A-208ENST00000576952 UNC13AQ9UPW8 1703 aa30.87■■■□□ 2.53
POLR2A-208ENST00000576952 BICRAQ9NZM4 1560 aa30.47■■■□□ 2.47
POLR2A-208ENST00000576952 PABPN1Q86U42 306 aaKnown RBP eCLIP30.47■■■□□ 2.47
POLR2A-208ENST00000576952 SCRIBQ14160 1630 aa30.43■■■□□ 2.46
POLR2A-208ENST00000576952 DNAJC5BQ9UF47 199 aa30.03■■■□□ 2.4
POLR2A-208ENST00000576952 SHROOM4Q9ULL8 1493 aa30■■■□□ 2.39
POLR2A-208ENST00000576952 EIF4G1Q04637 1599 aaKnown RBP29.64■■■□□ 2.34
POLR2A-208ENST00000576952 CC2D2AQ9P2K1 1620 aa29.57■■■□□ 2.32
POLR2A-208ENST00000576952 CECR2Q9BXF3 1484 aa29.32■■■□□ 2.28
POLR2A-208ENST00000576952 SMARCA4P51532 1647 aa29.08■■■□□ 2.25
POLR2A-208ENST00000576952 BAZ1AQ9NRL2 1556 aaPredicted RBP28.97■■■□□ 2.23
POLR2A-208ENST00000576952 ATAD2BQ9ULI0 1458 aa28.86■■■□□ 2.21
POLR2A-208ENST00000576952 NCAPD3P42695 1498 aa28.84■■■□□ 2.21
POLR2A-208ENST00000576952 SMARCA2P51531 1590 aa28.84■■■□□ 2.21
POLR2A-208ENST00000576952 MROH2BQ7Z745 1585 aa28.84■■■□□ 2.21
POLR2A-208ENST00000576952 PEG3Q9GZU2 1588 aa28.75■■■□□ 2.19
POLR2A-208ENST00000576952 HMGXB3Q12766 1538 aa28.73■■■□□ 2.19
POLR2A-208ENST00000576952 BAZ1BQ9UIG0 1483 aaKnown RBP28.64■■■□□ 2.17
POLR2A-208ENST00000576952 WIZO95785 1651 aa28.6■■■□□ 2.17
POLR2A-208ENST00000576952 RSF1Q96T23 1441 aaPredicted RBP28.43■■■□□ 2.14
POLR2A-208ENST00000576952 NESP48681 1621 aa28.26■■■□□ 2.11
POLR2A-208ENST00000576952 TOP2AP11388 1531 aaKnown RBP28.2■■■□□ 2.1
POLR2A-208ENST00000576952 LAMC3Q9Y6N6 1575 aa28.15■■■□□ 2.1
POLR2A-208ENST00000576952 ERCC6Q03468 1493 aa28.12■■■□□ 2.09
POLR2A-208ENST00000576952 KIF21AQ7Z4S6 1674 aa28.03■■■□□ 2.08
POLR2A-208ENST00000576952 CADPSQ9ULU8 1353 aa27.99■■■□□ 2.07
POLR2A-208ENST00000576952 PDS5BQ9NTI5 1447 aa27.89■■■□□ 2.06
POLR2A-208ENST00000576952 THOC2Q8NI27 1593 aaKnown RBP27.87■■■□□ 2.05
POLR2A-208ENST00000576952 CCDC88BA6NC98 1476 aa27.86■■■□□ 2.05
POLR2A-208ENST00000576952 CUX2O14529 1486 aa27.83■■■□□ 2.04
POLR2A-208ENST00000576952 CFTRP13569 1480 aa27.83■■■□□ 2.04
POLR2A-208ENST00000576952 PRDM2Q13029 1718 aa27.82■■■□□ 2.04
POLR2A-208ENST00000576952 FANCD2Q9BXW9 1451 aa27.7■■■□□ 2.03
POLR2A-208ENST00000576952 CEP164Q9UPV0 1460 aa27.68■■■□□ 2.02
POLR2A-208ENST00000576952 SUPT5HO00267 1087 aaKnown RBP27.66■■■□□ 2.02
POLR2A-208ENST00000576952 MRC2Q9UBG0 1479 aa27.65■■■□□ 2.02
POLR2A-208ENST00000576952 WDR62O43379 1518 aa27.59■■■□□ 2.01
POLR2A-208ENST00000576952 URB2Q14146 1524 aaKnown RBP27.46■■□□□ 1.99
POLR2A-208ENST00000576952 TOPBP1Q92547 1522 aa27.27■■□□□ 1.96
POLR2A-208ENST00000576952 DNMBPQ6XZF7 1577 aa27.25■■□□□ 1.95
POLR2A-208ENST00000576952 ABCC8Q09428 1581 aa27.21■■□□□ 1.95
POLR2A-208ENST00000576952 IFT140Q96RY7 1462 aa27.07■■□□□ 1.92
POLR2A-208ENST00000576952 DNAJC5Q9H3Z4 198 aa27.06■■□□□ 1.92
POLR2A-208ENST00000576952 CUX1P39880 1505 aa27.06■■□□□ 1.92
POLR2A-208ENST00000576952 POLA1P09884 1462 aaPredicted RBP27.03■■□□□ 1.92
POLR2A-208ENST00000576952 TARBP1Q13395 1621 aaKnown RBP27.03■■□□□ 1.92
POLR2A-208ENST00000576952 ZNF608Q9ULD9 1512 aaPredicted RBP27.01■■□□□ 1.91
POLR2A-208ENST00000576952 FGD5Q6ZNL6 1462 aa26.96■■□□□ 1.91
POLR2A-208ENST00000576952 EIF4G3O43432 1585 aaKnown RBP26.95■■□□□ 1.9
POLR2A-208ENST00000576952 RAD54L2Q9Y4B4 1467 aa26.93■■□□□ 1.9
POLR2A-208ENST00000576952 SOGA1O94964 1423 aa26.89■■□□□ 1.89
POLR2A-208ENST00000576952 BIVM-ERCC5R4GMW8 1640 aa26.85■■□□□ 1.89
POLR2A-208ENST00000576952 WDR97A6NE52 1622 aa26.84■■□□□ 1.89
POLR2A-208ENST00000576952 AQRO60306 1485 aaKnown RBP eCLIP26.84■■□□□ 1.891e-8■■■■□ 21
POLR2A-208ENST00000576952 SYNJ1O43426 1573 aa26.83■■□□□ 1.89
POLR2A-208ENST00000576952 TOP2BQ02880 1626 aa26.81■■□□□ 1.88
POLR2A-208ENST00000576952 WRNQ14191 1432 aaPredicted RBP eCLIP26.8■■□□□ 1.88
POLR2A-208ENST00000576952 TDRD9Q8NDG6 1382 aaKnown RBP26.76■■□□□ 1.87
POLR2A-208ENST00000576952 CHD1O14646 1710 aa26.72■■□□□ 1.87
POLR2A-208ENST00000576952 PBRM1Q86U86 1689 aa26.69■■□□□ 1.86
POLR2A-208ENST00000576952 ABCA10Q8WWZ4 1543 aa26.67■■□□□ 1.86
POLR2A-208ENST00000576952 OSCARQ8IYS5 282 aa26.64■■□□□ 1.86
POLR2A-208ENST00000576952 ABCA5Q8WWZ7 1642 aa26.64■■□□□ 1.85
POLR2A-208ENST00000576952 GAPVD1Q14C86 1478 aa26.59■■□□□ 1.85
POLR2A-208ENST00000576952 SNAPC4Q5SXM2 1469 aa26.59■■□□□ 1.85
POLR2A-208ENST00000576952 GRIN2BQ13224 1484 aa26.58■■□□□ 1.85
POLR2A-208ENST00000576952 MAGI1Q96QZ7 1491 aaPredicted RBP26.52■■□□□ 1.84
POLR2A-208ENST00000576952 FBLN2P98095 1184 aa26.51■■□□□ 1.83
POLR2A-208ENST00000576952 SYNJ2O15056 1496 aa26.42■■□□□ 1.82
POLR2A-208ENST00000576952 CHMP7Q8WUX9 453 aaPredicted RBP26.4■■□□□ 1.82
POLR2A-208ENST00000576952 ADAMTS12P58397 1594 aa26.37■■□□□ 1.81
POLR2A-208ENST00000576952 RIMBP3CA6NJZ7 1639 aa26.36■■□□□ 1.81
POLR2A-208ENST00000576952 RIMBP3BA6NNM3 1639 aa26.36■■□□□ 1.81
POLR2A-208ENST00000576952 RIMBP3Q9UFD9 1639 aa26.36■■□□□ 1.81
POLR2A-208ENST00000576952 ERICH3Q5RHP9 1530 aa26.35■■□□□ 1.81
POLR2A-208ENST00000576952 CLASP1Q7Z460 1538 aa26.3■■□□□ 1.8
POLR2A-208ENST00000576952 ARHGEF11O15085 1522 aa26.28■■□□□ 1.8
POLR2A-208ENST00000576952 GRIN2AQ12879 1464 aa26.26■■□□□ 1.79
POLR2A-208ENST00000576952 FHAD1B1AJZ9 1412 aa26.25■■□□□ 1.79
POLR2A-208ENST00000576952 KIF27Q86VH2 1401 aa26.22■■□□□ 1.79
POLR2A-208ENST00000576952 TRIM41Q8WV44 630 aa26.19■■□□□ 1.78
POLR2A-208ENST00000576952 CEP170Q5SW79 1584 aa26.19■■□□□ 1.78
POLR2A-208ENST00000576952 CUL7Q14999 1698 aa26.15■■□□□ 1.78
POLR2A-208ENST00000576952 IGF1RP08069 1367 aa26.13■■□□□ 1.77
POLR2A-208ENST00000576952 NUP160Q12769 1436 aa26.13■■□□□ 1.77
POLR2A-208ENST00000576952 ARAP1Q96P48 1450 aa26.06■■□□□ 1.76
POLR2A-208ENST00000576952 RUSC2Q8N2Y8 1516 aa26.06■■□□□ 1.76
POLR2A-208ENST00000576952 SHROOM2Q13796 1616 aa26.02■■□□□ 1.76
POLR2A-208ENST00000576952 CYB5RLQ6IPT4 315 aa26.01■■□□□ 1.75
POLR2A-208ENST00000576952 ERCC6L2Q5T890 1561 aa25.99■■□□□ 1.75
POLR2A-208ENST00000576952 CARMIL1Q5VZK9 1371 aa25.98■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms