RNA–Protein interactions for RNA: ENST00000494532.1

UBE3C-207, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2

Gene UBE3C, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-207ENST00000494532 NISCHQ9Y2I1 1504 aa32.93■■■□□ 2.86
UBE3C-207ENST00000494532 CCDC180Q9P1Z9 1646 aa29■■■□□ 2.23
UBE3C-207ENST00000494532 ABCC9O60706 1549 aa27.75■■■□□ 2.03
UBE3C-207ENST00000494532 ZCCHC6Q5VYS8 1495 aaKnown RBP27.58■■■□□ 2.01
UBE3C-207ENST00000494532 DCAF8L2P0C7V8 631 aa27.28■■□□□ 1.96
UBE3C-207ENST00000494532 DCAF1Q9Y4B6 1507 aa27.26■■□□□ 1.95
UBE3C-207ENST00000494532 MYO15BQ96JP2 1530 aa27.11■■□□□ 1.93
UBE3C-207ENST00000494532 NACADO15069 1562 aa27.09■■□□□ 1.93
UBE3C-207ENST00000494532 RB1CC1Q8TDY2 1594 aa26.97■■□□□ 1.91
UBE3C-207ENST00000494532 SCRIBQ14160 1630 aa26.56■■□□□ 1.84
UBE3C-207ENST00000494532 SHROOM4Q9ULL8 1493 aa26.49■■□□□ 1.83
UBE3C-207ENST00000494532 UNC13AQ9UPW8 1703 aa26.4■■□□□ 1.82
UBE3C-207ENST00000494532 BICRAQ9NZM4 1560 aa26.12■■□□□ 1.77
UBE3C-207ENST00000494532 PABPN1Q86U42 306 aaKnown RBP eCLIP26.03■■□□□ 1.76
UBE3C-207ENST00000494532 CECR2Q9BXF3 1484 aa25.58■■□□□ 1.69
UBE3C-207ENST00000494532 BAZ1AQ9NRL2 1556 aaPredicted RBP25.48■■□□□ 1.67
UBE3C-207ENST00000494532 SMARCA4P51532 1647 aa25.44■■□□□ 1.66
UBE3C-207ENST00000494532 MROH2BQ7Z745 1585 aa25.4■■□□□ 1.66
UBE3C-207ENST00000494532 EIF4G1Q04637 1599 aaKnown RBP25.39■■□□□ 1.65
UBE3C-207ENST00000494532 RSF1Q96T23 1441 aaPredicted RBP25.34■■□□□ 1.65
UBE3C-207ENST00000494532 SUPT5HO00267 1087 aaKnown RBP25.24■■□□□ 1.63
UBE3C-207ENST00000494532 WIZO95785 1651 aa25.19■■□□□ 1.62
UBE3C-207ENST00000494532 PEG3Q9GZU2 1588 aa25.14■■□□□ 1.61
UBE3C-207ENST00000494532 CC2D2AQ9P2K1 1620 aa25.12■■□□□ 1.61
UBE3C-207ENST00000494532 SMARCA2P51531 1590 aa25.12■■□□□ 1.61
UBE3C-207ENST00000494532 ATAD2BQ9ULI0 1458 aa25.1■■□□□ 1.61
UBE3C-207ENST00000494532 NCAPD3P42695 1498 aa24.96■■□□□ 1.59
UBE3C-207ENST00000494532 BAZ1BQ9UIG0 1483 aaKnown RBP24.96■■□□□ 1.59
UBE3C-207ENST00000494532 TOP2AP11388 1531 aaKnown RBP24.95■■□□□ 1.58
UBE3C-207ENST00000494532 HMGXB3Q12766 1538 aa24.93■■□□□ 1.58
UBE3C-207ENST00000494532 DNAJC5BQ9UF47 199 aa24.81■■□□□ 1.56
UBE3C-207ENST00000494532 CCDC88BA6NC98 1476 aa24.64■■□□□ 1.53
UBE3C-207ENST00000494532 CADPSQ9ULU8 1353 aa24.29■■□□□ 1.48
UBE3C-207ENST00000494532 CFTRP13569 1480 aa24.28■■□□□ 1.48
UBE3C-207ENST00000494532 LAMC3Q9Y6N6 1575 aa24.23■■□□□ 1.47
UBE3C-207ENST00000494532 PRDM2Q13029 1718 aa24.22■■□□□ 1.47
UBE3C-207ENST00000494532 NESP48681 1621 aa24.21■■□□□ 1.47
UBE3C-207ENST00000494532 PDS5BQ9NTI5 1447 aa24.04■■□□□ 1.44
UBE3C-207ENST00000494532 FANCD2Q9BXW9 1451 aa24.03■■□□□ 1.44
UBE3C-207ENST00000494532 ABCC8Q09428 1581 aa23.98■■□□□ 1.43
UBE3C-207ENST00000494532 KIF21AQ7Z4S6 1674 aa23.97■■□□□ 1.43
UBE3C-207ENST00000494532 CEP164Q9UPV0 1460 aa23.95■■□□□ 1.42
UBE3C-207ENST00000494532 CHIC1Q5VXU3 224 aa23.92■■□□□ 1.42
UBE3C-207ENST00000494532 WRNQ14191 1432 aaPredicted RBP eCLIP23.89■■□□□ 1.41
UBE3C-207ENST00000494532 ERCC6Q03468 1493 aa23.87■■□□□ 1.41
UBE3C-207ENST00000494532 SYNJ1O43426 1573 aa23.81■■□□□ 1.4
UBE3C-207ENST00000494532 CUX1P39880 1505 aa23.8■■□□□ 1.4
UBE3C-207ENST00000494532 TRIM41Q8WV44 630 aa23.79■■□□□ 1.4
UBE3C-207ENST00000494532 MRC2Q9UBG0 1479 aa23.77■■□□□ 1.4
UBE3C-207ENST00000494532 TOP2BQ02880 1626 aa23.77■■□□□ 1.4
UBE3C-207ENST00000494532 BIVM-ERCC5R4GMW8 1640 aa23.77■■□□□ 1.4
UBE3C-207ENST00000494532 DNMBPQ6XZF7 1577 aa23.76■■□□□ 1.39
UBE3C-207ENST00000494532 URB2Q14146 1524 aaKnown RBP23.74■■□□□ 1.39
UBE3C-207ENST00000494532 TOPBP1Q92547 1522 aa23.73■■□□□ 1.39
UBE3C-207ENST00000494532 THOC2Q8NI27 1593 aaKnown RBP23.7■■□□□ 1.38
UBE3C-207ENST00000494532 WDR62O43379 1518 aa23.66■■□□□ 1.38
UBE3C-207ENST00000494532 FGD5Q6ZNL6 1462 aa23.62■■□□□ 1.37
UBE3C-207ENST00000494532 POLA1P09884 1462 aaPredicted RBP23.56■■□□□ 1.36
UBE3C-207ENST00000494532 SOGA1O94964 1423 aa23.47■■□□□ 1.35
UBE3C-207ENST00000494532 RAD54L2Q9Y4B4 1467 aa23.47■■□□□ 1.35
UBE3C-207ENST00000494532 CUX2O14529 1486 aa23.43■■□□□ 1.34
UBE3C-207ENST00000494532 WDR97A6NE52 1622 aa23.41■■□□□ 1.34
UBE3C-207ENST00000494532 TARBP1Q13395 1621 aaKnown RBP23.41■■□□□ 1.34
UBE3C-207ENST00000494532 ABCA10Q8WWZ4 1543 aa23.4■■□□□ 1.34
UBE3C-207ENST00000494532 IFT140Q96RY7 1462 aa23.4■■□□□ 1.34
UBE3C-207ENST00000494532 KIF27Q86VH2 1401 aa23.34■■□□□ 1.33
UBE3C-207ENST00000494532 EEA1Q15075 1411 aa23.33■■□□□ 1.33
UBE3C-207ENST00000494532 RUSC2Q8N2Y8 1516 aa23.33■■□□□ 1.33
UBE3C-207ENST00000494532 FAM9AQ8IZU1 332 aaPredicted RBP23.32■■□□□ 1.32
UBE3C-207ENST00000494532 TDRD9Q8NDG6 1382 aaKnown RBP23.27■■□□□ 1.31
UBE3C-207ENST00000494532 ABCA5Q8WWZ7 1642 aa23.26■■□□□ 1.31
UBE3C-207ENST00000494532 ZNF608Q9ULD9 1512 aaPredicted RBP23.24■■□□□ 1.31
UBE3C-207ENST00000494532 GAPVD1Q14C86 1478 aa23.23■■□□□ 1.31
UBE3C-207ENST00000494532 EIF4G3O43432 1585 aaKnown RBP23.2■■□□□ 1.3
UBE3C-207ENST00000494532 AQRO60306 1485 aaKnown RBP eCLIP23.2■■□□□ 1.32e-6■■■■■ 30.4
UBE3C-207ENST00000494532 CSRNP3Q8WYN3 585 aa23.19■■□□□ 1.3
UBE3C-207ENST00000494532 PBRM1Q86U86 1689 aa23.18■■□□□ 1.3
UBE3C-207ENST00000494532 IGF1RP08069 1367 aa23.14■■□□□ 1.29
UBE3C-207ENST00000494532 ERICH3Q5RHP9 1530 aa23.13■■□□□ 1.29
UBE3C-207ENST00000494532 GRIN2BQ13224 1484 aa23.12■■□□□ 1.29
UBE3C-207ENST00000494532 CUL7Q14999 1698 aa23.08■■□□□ 1.29
UBE3C-207ENST00000494532 KIF21BO75037 1637 aa23.06■■□□□ 1.28
UBE3C-207ENST00000494532 PRXQ9BXM0 1461 aa23.05■■□□□ 1.28
UBE3C-207ENST00000494532 CARMIL1Q5VZK9 1371 aa23.03■■□□□ 1.28
UBE3C-207ENST00000494532 SNAPC4Q5SXM2 1469 aa23.02■■□□□ 1.28
UBE3C-207ENST00000494532 ADAMTS12P58397 1594 aa23.01■■□□□ 1.27
UBE3C-207ENST00000494532 EHMT2Q96KQ7 1210 aa22.99■■□□□ 1.27
UBE3C-207ENST00000494532 GOLGA3Q08378 1498 aa22.98■■□□□ 1.27
UBE3C-207ENST00000494532 MAGI1Q96QZ7 1491 aaPredicted RBP22.98■■□□□ 1.27
UBE3C-207ENST00000494532 RAPGEF2Q9Y4G8 1499 aa22.98■■□□□ 1.27
UBE3C-207ENST00000494532 FHAD1B1AJZ9 1412 aa22.97■■□□□ 1.27
UBE3C-207ENST00000494532 LOC105371045A0A1W2PR82 267 aa22.95■■□□□ 1.26
UBE3C-207ENST00000494532 SYNJ2O15056 1496 aa22.89■■□□□ 1.25
UBE3C-207ENST00000494532 UBTFP17480 764 aaKnown RBP22.87■■□□□ 1.25
UBE3C-207ENST00000494532 GRIN2AQ12879 1464 aa22.84■■□□□ 1.25
UBE3C-207ENST00000494532 CHMP7Q8WUX9 453 aaPredicted RBP22.83■■□□□ 1.25
UBE3C-207ENST00000494532 FBLN2P98095 1184 aa22.81■■□□□ 1.24
UBE3C-207ENST00000494532 CHD1O14646 1710 aa22.81■■□□□ 1.24
UBE3C-207ENST00000494532 TNIKQ9UKE5 1360 aa22.79■■□□□ 1.24
UBE3C-207ENST00000494532 CTTNBP2Q8WZ74 1663 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms