Protein–RNA interactions for Protein: P35712

SOX6, Transcription factor SOX-6, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6P35712 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SOX6P35712 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
SOX6P35712 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SOX6P35712 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SOX6P35712 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SOX6P35712 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
SOX6P35712 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
SOX6P35712 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC17.51■□□□□ 0.39
SOX6P35712 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SOX6P35712 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SOX6P35712 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SOX6P35712 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
SOX6P35712 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SOX6P35712 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SOX6P35712 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SOX6P35712 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SOX6P35712 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC17.51■□□□□ 0.39
SOX6P35712 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.51■□□□□ 0.39
SOX6P35712 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SOX6P35712 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SOX6P35712 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.51■□□□□ 0.39
SOX6P35712 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
SOX6P35712 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SOX6P35712 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SOX6P35712 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SOX6P35712 AC116050.2-201ENST00000612102 1779 ntBASIC17.51■□□□□ 0.39
SOX6P35712 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SOX6P35712 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.5■□□□□ 0.39
SOX6P35712 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.5■□□□□ 0.39
SOX6P35712 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.5■□□□□ 0.39
SOX6P35712 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SOX6P35712 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SOX6P35712 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC17.5■□□□□ 0.39
SOX6P35712 SLC47A1P1-202ENST00000449666 945 ntBASIC17.5■□□□□ 0.39
SOX6P35712 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SOX6P35712 AC053503.5-201ENST00000601508 636 ntBASIC17.5■□□□□ 0.39
SOX6P35712 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC17.5■□□□□ 0.39
SOX6P35712 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC17.5■□□□□ 0.39
SOX6P35712 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SOX6P35712 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SOX6P35712 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SOX6P35712 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SOX6P35712 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
SOX6P35712 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SOX6P35712 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SOX6P35712 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SOX6P35712 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SOX6P35712 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SOX6P35712 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SOX6P35712 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SOX6P35712 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
SOX6P35712 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
SOX6P35712 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.5■□□□□ 0.39
SOX6P35712 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC17.5■□□□□ 0.39
SOX6P35712 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SOX6P35712 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
SOX6P35712 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.49■□□□□ 0.39
SOX6P35712 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SOX6P35712 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
SOX6P35712 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SOX6P35712 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
SOX6P35712 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SOX6P35712 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SOX6P35712 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
SOX6P35712 KRT8P36-201ENST00000489121 1440 ntBASIC17.49■□□□□ 0.39
SOX6P35712 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SOX6P35712 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.49■□□□□ 0.39
SOX6P35712 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.49■□□□□ 0.39
SOX6P35712 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.49■□□□□ 0.39
SOX6P35712 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SOX6P35712 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC17.49■□□□□ 0.39
SOX6P35712 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SOX6P35712 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SOX6P35712 MTURN-203ENST00000409688 843 ntTSL 2 BASIC17.49■□□□□ 0.39
SOX6P35712 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SOX6P35712 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC17.49■□□□□ 0.39
SOX6P35712 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC17.49■□□□□ 0.39
SOX6P35712 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC17.49■□□□□ 0.39
SOX6P35712 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SOX6P35712 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SOX6P35712 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SOX6P35712 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
SOX6P35712 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SOX6P35712 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SOX6P35712 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
SOX6P35712 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SOX6P35712 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC17.49■□□□□ 0.39
SOX6P35712 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
SOX6P35712 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
SOX6P35712 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SOX6P35712 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.49■□□□□ 0.39
SOX6P35712 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SOX6P35712 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SOX6P35712 AC005224.4-201ENST00000583262 1652 ntBASIC17.48■□□□□ 0.39
SOX6P35712 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SOX6P35712 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SOX6P35712 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SOX6P35712 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SOX6P35712 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC17.48■□□□□ 0.39
SOX6P35712 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms