Protein–RNA interactions for Protein: P28472

GABRB3, Gamma-aminobutyric acid receptor subunit beta-3, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3P28472 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.43■□□□□ 0.7
GABRB3P28472 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.43■□□□□ 0.7
GABRB3P28472 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.43■□□□□ 0.7
GABRB3P28472 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
GABRB3P28472 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GABRB3P28472 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.43■□□□□ 0.7
GABRB3P28472 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GABRB3P28472 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GABRB3P28472 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GABRB3P28472 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GABRB3P28472 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
GABRB3P28472 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
GABRB3P28472 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
GABRB3P28472 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
GABRB3P28472 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
GABRB3P28472 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.42■□□□□ 0.7
GABRB3P28472 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.42■□□□□ 0.7
GABRB3P28472 AC142086.2-201ENST00000569753 217 ntBASIC19.42■□□□□ 0.7
GABRB3P28472 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.42■□□□□ 0.7
GABRB3P28472 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
GABRB3P28472 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
GABRB3P28472 AC104771.1-201ENST00000603335 964 ntBASIC19.42■□□□□ 0.7
GABRB3P28472 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GABRB3P28472 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
GABRB3P28472 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.42■□□□□ 0.7
GABRB3P28472 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
GABRB3P28472 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
GABRB3P28472 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
GABRB3P28472 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.42■□□□□ 0.7
GABRB3P28472 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GABRB3P28472 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GABRB3P28472 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GABRB3P28472 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GABRB3P28472 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
GABRB3P28472 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
GABRB3P28472 AC004408.2-201ENST00000623613 2777 ntBASIC19.41■□□□□ 0.7
GABRB3P28472 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
GABRB3P28472 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
GABRB3P28472 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.41■□□□□ 0.7
GABRB3P28472 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
GABRB3P28472 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GABRB3P28472 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
GABRB3P28472 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GABRB3P28472 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
GABRB3P28472 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.41■□□□□ 0.7
GABRB3P28472 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.41■□□□□ 0.7
GABRB3P28472 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.41■□□□□ 0.7
GABRB3P28472 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GABRB3P28472 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.41■□□□□ 0.7
GABRB3P28472 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
GABRB3P28472 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.41■□□□□ 0.7
GABRB3P28472 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
GABRB3P28472 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
GABRB3P28472 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GABRB3P28472 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
GABRB3P28472 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.4■□□□□ 0.7
GABRB3P28472 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GABRB3P28472 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
GABRB3P28472 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.4■□□□□ 0.7
GABRB3P28472 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.4■□□□□ 0.7
GABRB3P28472 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
GABRB3P28472 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GABRB3P28472 AC069152.1-201ENST00000438030 544 ntBASIC19.4■□□□□ 0.7
GABRB3P28472 AC090192.1-201ENST00000517740 490 ntBASIC19.4■□□□□ 0.7
GABRB3P28472 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.4■□□□□ 0.7
GABRB3P28472 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
GABRB3P28472 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.4■□□□□ 0.7
GABRB3P28472 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.4■□□□□ 0.7
GABRB3P28472 AC120498.8-201ENST00000614275 531 ntBASIC19.4■□□□□ 0.7
GABRB3P28472 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
GABRB3P28472 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GABRB3P28472 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GABRB3P28472 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
GABRB3P28472 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.4■□□□□ 0.7
GABRB3P28472 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
GABRB3P28472 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.7
GABRB3P28472 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.7
GABRB3P28472 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
GABRB3P28472 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
GABRB3P28472 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
GABRB3P28472 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
GABRB3P28472 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
GABRB3P28472 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.39■□□□□ 0.69
GABRB3P28472 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.39■□□□□ 0.69
GABRB3P28472 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.39■□□□□ 0.69
GABRB3P28472 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GABRB3P28472 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
GABRB3P28472 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
GABRB3P28472 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
GABRB3P28472 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
GABRB3P28472 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.39■□□□□ 0.69
GABRB3P28472 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
GABRB3P28472 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GABRB3P28472 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GABRB3P28472 LINC01465-201ENST00000408887 1940 ntBASIC19.39■□□□□ 0.69
GABRB3P28472 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GABRB3P28472 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
GABRB3P28472 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
GABRB3P28472 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
GABRB3P28472 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms