Protein–RNA interactions for Protein: Q9Y6A9

SPCS1, Signal peptidase complex subunit 1, humanhuman

Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1Q9Y6A9 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC13.49□□□□□ -0.25
SPCS1Q9Y6A9 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SPCS1Q9Y6A9 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SPCS1Q9Y6A9 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
SPCS1Q9Y6A9 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
SPCS1Q9Y6A9 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SPCS1Q9Y6A9 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SPCS1Q9Y6A9 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SPCS1Q9Y6A9 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SPCS1Q9Y6A9 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC13.49□□□□□ -0.25
SPCS1Q9Y6A9 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC13.49□□□□□ -0.25
SPCS1Q9Y6A9 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
SPCS1Q9Y6A9 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SPCS1Q9Y6A9 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
SPCS1Q9Y6A9 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC13.48□□□□□ -0.25
SPCS1Q9Y6A9 WIZP1-201ENST00000531444 2299 ntBASIC13.48□□□□□ -0.25
SPCS1Q9Y6A9 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SPCS1Q9Y6A9 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC13.48□□□□□ -0.25
SPCS1Q9Y6A9 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC13.48□□□□□ -0.25
SPCS1Q9Y6A9 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC13.48□□□□□ -0.25
SPCS1Q9Y6A9 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SPCS1Q9Y6A9 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SPCS1Q9Y6A9 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SPCS1Q9Y6A9 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SPCS1Q9Y6A9 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
SPCS1Q9Y6A9 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC13.48□□□□□ -0.25
SPCS1Q9Y6A9 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SPCS1Q9Y6A9 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC13.48□□□□□ -0.25
SPCS1Q9Y6A9 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
SPCS1Q9Y6A9 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SPCS1Q9Y6A9 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC13.48□□□□□ -0.25
SPCS1Q9Y6A9 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC13.48□□□□□ -0.25
SPCS1Q9Y6A9 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC13.48□□□□□ -0.25
SPCS1Q9Y6A9 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
SPCS1Q9Y6A9 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC13.48□□□□□ -0.25
SPCS1Q9Y6A9 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SPCS1Q9Y6A9 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SPCS1Q9Y6A9 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SPCS1Q9Y6A9 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
SPCS1Q9Y6A9 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC13.48□□□□□ -0.25
SPCS1Q9Y6A9 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SPCS1Q9Y6A9 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
SPCS1Q9Y6A9 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
SPCS1Q9Y6A9 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SPCS1Q9Y6A9 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
SPCS1Q9Y6A9 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
SPCS1Q9Y6A9 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
SPCS1Q9Y6A9 CD276-203ENST00000537340 2439 ntTSL 2 BASIC13.48□□□□□ -0.25
SPCS1Q9Y6A9 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC13.48□□□□□ -0.25
SPCS1Q9Y6A9 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC13.47□□□□□ -0.25
SPCS1Q9Y6A9 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SPCS1Q9Y6A9 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC13.47□□□□□ -0.25
SPCS1Q9Y6A9 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
SPCS1Q9Y6A9 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SPCS1Q9Y6A9 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SPCS1Q9Y6A9 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
SPCS1Q9Y6A9 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
SPCS1Q9Y6A9 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
SPCS1Q9Y6A9 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SPCS1Q9Y6A9 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SPCS1Q9Y6A9 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
SPCS1Q9Y6A9 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
SPCS1Q9Y6A9 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC13.47□□□□□ -0.25
SPCS1Q9Y6A9 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SPCS1Q9Y6A9 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC13.47□□□□□ -0.25
SPCS1Q9Y6A9 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
SPCS1Q9Y6A9 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
SPCS1Q9Y6A9 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SPCS1Q9Y6A9 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC13.47□□□□□ -0.25
SPCS1Q9Y6A9 HLA-V-202ENST00000446817 847 ntBASIC13.47□□□□□ -0.25
SPCS1Q9Y6A9 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
SPCS1Q9Y6A9 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
SPCS1Q9Y6A9 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SPCS1Q9Y6A9 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC13.47□□□□□ -0.25
SPCS1Q9Y6A9 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC13.47□□□□□ -0.25
SPCS1Q9Y6A9 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SPCS1Q9Y6A9 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SPCS1Q9Y6A9 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC13.47□□□□□ -0.25
SPCS1Q9Y6A9 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
SPCS1Q9Y6A9 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SPCS1Q9Y6A9 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SPCS1Q9Y6A9 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
SPCS1Q9Y6A9 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
SPCS1Q9Y6A9 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
SPCS1Q9Y6A9 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SPCS1Q9Y6A9 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC13.46□□□□□ -0.25
SPCS1Q9Y6A9 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.25
SPCS1Q9Y6A9 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SPCS1Q9Y6A9 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC13.46□□□□□ -0.25
SPCS1Q9Y6A9 LINC01126-201ENST00000623515 1646 ntBASIC13.46□□□□□ -0.25
SPCS1Q9Y6A9 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SPCS1Q9Y6A9 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SPCS1Q9Y6A9 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SPCS1Q9Y6A9 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SPCS1Q9Y6A9 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SPCS1Q9Y6A9 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SPCS1Q9Y6A9 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SPCS1Q9Y6A9 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SPCS1Q9Y6A9 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SPCS1Q9Y6A9 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC13.46□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms