Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF144AP50876 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
RNF144AP50876 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.21■□□□□ 0.51
RNF144AP50876 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF144AP50876 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF144AP50876 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF144AP50876 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF144AP50876 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.21■□□□□ 0.51
RNF144AP50876 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.21■□□□□ 0.51
RNF144AP50876 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.21■□□□□ 0.51
RNF144AP50876 PNMA6B-201ENST00000538162 1200 ntBASIC18.21■□□□□ 0.51
RNF144AP50876 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF144AP50876 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.21■□□□□ 0.51
RNF144AP50876 SOX15-203ENST00000570788 1093 ntBASIC18.21■□□□□ 0.51
RNF144AP50876 AC005829.2-201ENST00000571422 1056 ntBASIC18.21■□□□□ 0.51
RNF144AP50876 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
RNF144AP50876 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF144AP50876 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
RNF144AP50876 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF144AP50876 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF144AP50876 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RNF144AP50876 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RNF144AP50876 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF144AP50876 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF144AP50876 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF144AP50876 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.21■□□□□ 0.51
RNF144AP50876 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
RNF144AP50876 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.5
RNF144AP50876 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
RNF144AP50876 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
RNF144AP50876 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.2■□□□□ 0.5
RNF144AP50876 AC138932.1-201ENST00000534164 6830 ntBASIC18.2■□□□□ 0.5
RNF144AP50876 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.2■□□□□ 0.5
RNF144AP50876 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
RNF144AP50876 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF144AP50876 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.2■□□□□ 0.5
RNF144AP50876 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.2■□□□□ 0.5
RNF144AP50876 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.2■□□□□ 0.5
RNF144AP50876 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.2■□□□□ 0.5
RNF144AP50876 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.2■□□□□ 0.5
RNF144AP50876 RNA5SP413-201ENST00000516373 109 ntBASIC18.2■□□□□ 0.5
RNF144AP50876 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.2■□□□□ 0.5
RNF144AP50876 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
RNF144AP50876 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.2■□□□□ 0.5
RNF144AP50876 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF144AP50876 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
RNF144AP50876 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF144AP50876 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RNF144AP50876 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
RNF144AP50876 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RNF144AP50876 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.2■□□□□ 0.5
RNF144AP50876 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
RNF144AP50876 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
RNF144AP50876 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF144AP50876 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF144AP50876 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RNF144AP50876 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF144AP50876 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF144AP50876 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF144AP50876 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF144AP50876 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF144AP50876 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
RNF144AP50876 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.19■□□□□ 0.5
RNF144AP50876 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF144AP50876 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF144AP50876 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF144AP50876 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF144AP50876 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF144AP50876 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.19■□□□□ 0.5
RNF144AP50876 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RNF144AP50876 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RNF144AP50876 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.19■□□□□ 0.5
RNF144AP50876 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.19■□□□□ 0.5
RNF144AP50876 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF144AP50876 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
RNF144AP50876 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RNF144AP50876 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.19■□□□□ 0.5
RNF144AP50876 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.19■□□□□ 0.5
RNF144AP50876 AC018553.1-201ENST00000616682 1458 ntBASIC18.19■□□□□ 0.5
RNF144AP50876 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF144AP50876 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF144AP50876 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF144AP50876 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF144AP50876 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF144AP50876 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.18■□□□□ 0.5
RNF144AP50876 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF144AP50876 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
RNF144AP50876 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF144AP50876 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RNF144AP50876 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF144AP50876 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF144AP50876 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF144AP50876 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF144AP50876 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF144AP50876 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF144AP50876 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF144AP50876 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.18■□□□□ 0.5
RNF144AP50876 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.18■□□□□ 0.5
RNF144AP50876 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.18■□□□□ 0.5
RNF144AP50876 RPS2P52-201ENST00000469610 820 ntBASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms