RNA–Protein interactions for RNA: ENST00000340650.5

NHLRC1-201, Transcript of NHL repeat containing E3 ubiquitin protein ligase 1, humanhuman

APPRIS P1 BASIC

Gene NHLRC1, Length 2,248 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1-201ENST00000340650 NISCHQ9Y2I1 1504 aa42.57■■■■■ 4.41
NHLRC1-201ENST00000340650 CCDC180Q9P1Z9 1646 aa36.89■■■■□ 3.5
NHLRC1-201ENST00000340650 ZCCHC6Q5VYS8 1495 aaKnown RBP35.78■■■■□ 3.32
NHLRC1-201ENST00000340650 DCAF8L2P0C7V8 631 aa35.43■■■■□ 3.26
NHLRC1-201ENST00000340650 SHROOM4Q9ULL8 1493 aa35.16■■■■□ 3.22
NHLRC1-201ENST00000340650 DCAF1Q9Y4B6 1507 aa35.05■■■■□ 3.2
NHLRC1-201ENST00000340650 ABCC9O60706 1549 aa35.04■■■■□ 3.2
NHLRC1-201ENST00000340650 MYO15BQ96JP2 1530 aa34.53■■■■□ 3.12
NHLRC1-201ENST00000340650 NACADO15069 1562 aa34.37■■■■□ 3.09
NHLRC1-201ENST00000340650 SCRIBQ14160 1630 aa34.21■■■■□ 3.07
NHLRC1-201ENST00000340650 RB1CC1Q8TDY2 1594 aa34.07■■■■□ 3.04
NHLRC1-201ENST00000340650 SUPT5HO00267 1087 aaKnown RBP33.89■■■■□ 3.02
NHLRC1-201ENST00000340650 UNC13AQ9UPW8 1703 aa33.43■■■□□ 2.94
NHLRC1-201ENST00000340650 CECR2Q9BXF3 1484 aa33.19■■■□□ 2.9
NHLRC1-201ENST00000340650 PABPN1Q86U42 306 aaKnown RBP eCLIP33.18■■■□□ 2.9
NHLRC1-201ENST00000340650 RSF1Q96T23 1441 aaPredicted RBP33.16■■■□□ 2.9
NHLRC1-201ENST00000340650 BICRAQ9NZM4 1560 aa33.11■■■□□ 2.89
NHLRC1-201ENST00000340650 MROH2BQ7Z745 1585 aa32.98■■■□□ 2.87
NHLRC1-201ENST00000340650 BAZ1AQ9NRL2 1556 aaPredicted RBP32.83■■■□□ 2.85
NHLRC1-201ENST00000340650 WIZO95785 1651 aa32.72■■■□□ 2.83
NHLRC1-201ENST00000340650 SMARCA4P51532 1647 aa32.69■■■□□ 2.82
NHLRC1-201ENST00000340650 CHIC1Q5VXU3 224 aa32.47■■■□□ 2.79
NHLRC1-201ENST00000340650 HRCP23327 699 aa32.44■■■□□ 2.78
NHLRC1-201ENST00000340650 TOP2AP11388 1531 aaKnown RBP32.29■■■□□ 2.76
NHLRC1-201ENST00000340650 PEG3Q9GZU2 1588 aa32.18■■■□□ 2.74
NHLRC1-201ENST00000340650 ATAD2BQ9ULI0 1458 aa32.14■■■□□ 2.74
NHLRC1-201ENST00000340650 EIF4G1Q04637 1599 aaKnown RBP32.11■■■□□ 2.73
NHLRC1-201ENST00000340650 CCDC88BA6NC98 1476 aa32.05■■■□□ 2.72
NHLRC1-201ENST00000340650 SMARCA2P51531 1590 aa32.05■■■□□ 2.72
NHLRC1-201ENST00000340650 BAZ1BQ9UIG0 1483 aaKnown RBP31.98■■■□□ 2.71
NHLRC1-201ENST00000340650 PCGF6Q9BYE7 350 aa31.92■■■□□ 2.7
NHLRC1-201ENST00000340650 NCAPD3P42695 1498 aa31.77■■■□□ 2.68
NHLRC1-201ENST00000340650 TRIM41Q8WV44 630 aa31.75■■■□□ 2.67
NHLRC1-201ENST00000340650 HMGXB3Q12766 1538 aa31.7■■■□□ 2.67
NHLRC1-201ENST00000340650 CC2D2AQ9P2K1 1620 aa31.61■■■□□ 2.65
NHLRC1-201ENST00000340650 PPARGC1BQ86YN6 1023 aaKnown RBP31.55■■■□□ 2.64
NHLRC1-201ENST00000340650 ABCC8Q09428 1581 aa31.51■■■□□ 2.63
NHLRC1-201ENST00000340650 LOC105371045A0A1W2PR82 267 aa31.44■■■□□ 2.62
NHLRC1-201ENST00000340650 FAM9AQ8IZU1 332 aaPredicted RBP31.33■■■□□ 2.61
NHLRC1-201ENST00000340650 TRIM26Q12899 539 aaPredicted RBP31.3■■■□□ 2.6
NHLRC1-201ENST00000340650 WRNQ14191 1432 aaPredicted RBP eCLIP31.2■■■□□ 2.58
NHLRC1-201ENST00000340650 CFTRP13569 1480 aa31.15■■■□□ 2.58
NHLRC1-201ENST00000340650 SYNJ1O43426 1573 aa31.08■■■□□ 2.57
NHLRC1-201ENST00000340650 CADPSQ9ULU8 1353 aa31.03■■■□□ 2.56
NHLRC1-201ENST00000340650 EHMT2Q96KQ7 1210 aa31.02■■■□□ 2.56
NHLRC1-201ENST00000340650 DNAJC5BQ9UF47 199 aa31.01■■■□□ 2.55
NHLRC1-201ENST00000340650 SOGA1O94964 1423 aa30.96■■■□□ 2.55
NHLRC1-201ENST00000340650 ZEB1P37275 1124 aaPredicted RBP30.92■■■□□ 2.54
NHLRC1-201ENST00000340650 PRDM2Q13029 1718 aa30.87■■■□□ 2.53
NHLRC1-201ENST00000340650 TOP2BQ02880 1626 aa30.85■■■□□ 2.53
NHLRC1-201ENST00000340650 RUSC2Q8N2Y8 1516 aa30.85■■■□□ 2.53
NHLRC1-201ENST00000340650 NESP48681 1621 aa30.83■■■□□ 2.53
NHLRC1-201ENST00000340650 CUX1P39880 1505 aa30.81■■■□□ 2.52
NHLRC1-201ENST00000340650 BIVM-ERCC5R4GMW8 1640 aa30.78■■■□□ 2.52
NHLRC1-201ENST00000340650 FANCD2Q9BXW9 1451 aa30.72■■■□□ 2.51
NHLRC1-201ENST00000340650 EEA1Q15075 1411 aa30.71■■■□□ 2.51
NHLRC1-201ENST00000340650 CSRNP3Q8WYN3 585 aa30.69■■■□□ 2.5
NHLRC1-201ENST00000340650 LAMC3Q9Y6N6 1575 aa30.63■■■□□ 2.49
NHLRC1-201ENST00000340650 CEP164Q9UPV0 1460 aa30.48■■■□□ 2.47
NHLRC1-201ENST00000340650 PDS5BQ9NTI5 1447 aa30.46■■■□□ 2.47
NHLRC1-201ENST00000340650 FGD5Q6ZNL6 1462 aa30.45■■■□□ 2.47
NHLRC1-201ENST00000340650 UBTFP17480 764 aaKnown RBP30.41■■■□□ 2.46
NHLRC1-201ENST00000340650 DNMBPQ6XZF7 1577 aa30.4■■■□□ 2.46
NHLRC1-201ENST00000340650 GOLGA3Q08378 1498 aa30.39■■■□□ 2.46
NHLRC1-201ENST00000340650 TOPBP1Q92547 1522 aa30.38■■■□□ 2.45
NHLRC1-201ENST00000340650 KIF27Q86VH2 1401 aa30.37■■■□□ 2.45
NHLRC1-201ENST00000340650 PELP1Q8IZL8 1130 aaKnown RBP30.36■■■□□ 2.45
NHLRC1-201ENST00000340650 KIF21AQ7Z4S6 1674 aa30.35■■■□□ 2.45
NHLRC1-201ENST00000340650 KIF21BO75037 1637 aa30.34■■■□□ 2.45
NHLRC1-201ENST00000340650 URB2Q14146 1524 aaKnown RBP30.33■■■□□ 2.45
NHLRC1-201ENST00000340650 TNIKQ9UKE5 1360 aa30.32■■■□□ 2.45
NHLRC1-201ENST00000340650 CUX2O14529 1486 aa30.31■■■□□ 2.44
NHLRC1-201ENST00000340650 RAPGEF2Q9Y4G8 1499 aa30.29■■■□□ 2.44
NHLRC1-201ENST00000340650 POLA1P09884 1462 aaPredicted RBP30.27■■■□□ 2.44
NHLRC1-201ENST00000340650 CEP162Q5TB80 1403 aa30.26■■■□□ 2.43
NHLRC1-201ENST00000340650 RAD54L2Q9Y4B4 1467 aa30.26■■■□□ 2.43
NHLRC1-201ENST00000340650 PRXQ9BXM0 1461 aa30.19■■■□□ 2.42
NHLRC1-201ENST00000340650 SCAF1Q9H7N4 1312 aaKnown RBP30.19■■■□□ 2.42
NHLRC1-201ENST00000340650 IGF1RP08069 1367 aa30.12■■■□□ 2.41
NHLRC1-201ENST00000340650 ABCA10Q8WWZ4 1543 aa30.11■■■□□ 2.41
NHLRC1-201ENST00000340650 ERICH3Q5RHP9 1530 aa30.09■■■□□ 2.41
NHLRC1-201ENST00000340650 MRC2Q9UBG0 1479 aa30.06■■■□□ 2.4
NHLRC1-201ENST00000340650 RANGAP1P46060 587 aaPredicted RBP30.04■■■□□ 2.4
NHLRC1-201ENST00000340650 ERCC6Q03468 1493 aa29.99■■■□□ 2.39
NHLRC1-201ENST00000340650 CARMIL1Q5VZK9 1371 aa29.97■■■□□ 2.39
NHLRC1-201ENST00000340650 CLIP1P30622 1438 aa29.97■■■□□ 2.39
NHLRC1-201ENST00000340650 TDRD9Q8NDG6 1382 aaKnown RBP29.97■■■□□ 2.39
NHLRC1-201ENST00000340650 WDR97A6NE52 1622 aa29.95■■■□□ 2.39
NHLRC1-201ENST00000340650 TARBP1Q13395 1621 aaKnown RBP29.88■■■□□ 2.37
NHLRC1-201ENST00000340650 WDR62O43379 1518 aa29.87■■■□□ 2.37
NHLRC1-201ENST00000340650 ABCA5Q8WWZ7 1642 aa29.85■■■□□ 2.37
NHLRC1-201ENST00000340650 GAPVD1Q14C86 1478 aa29.84■■■□□ 2.37
NHLRC1-201ENST00000340650 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.83■■■□□ 2.37
NHLRC1-201ENST00000340650 CCER1Q8TC90 406 aaPredicted RBP29.81■■■□□ 2.36
NHLRC1-201ENST00000340650 ACIN1Q9UKV3 1341 aaKnown RBP29.75■■■□□ 2.35
NHLRC1-201ENST00000340650 THOC2Q8NI27 1593 aaKnown RBP29.75■■■□□ 2.35
NHLRC1-201ENST00000340650 CUL7Q14999 1698 aa29.75■■■□□ 2.35
NHLRC1-201ENST00000340650 AQRO60306 1485 aaKnown RBP eCLIP29.73■■■□□ 2.35
NHLRC1-201ENST00000340650 TTBK1Q5TCY1 1321 aaPredicted RBP29.7■■■□□ 2.35
NHLRC1-201ENST00000340650 IFT140Q96RY7 1462 aa29.7■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms