Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 COMT-208ENST00000428707 724 ntTSL 313.74□□□□□ -0.216e-7■■■■□ 22.4
RPS3P23396 GSTP1-207ENST00000498765 723 ntTSL 39.76□□□□□ -0.852e-10■■■■□ 22.4
RPS3P23396 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.77■□□□□ 0.282e-9■■■■□ 22.4
RPS3P23396 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.232e-9■■■■□ 22.4
RPS3P23396 PPIB-203ENST00000561048 1208 ntTSL 1 (best)13.08□□□□□ -0.329e-14■■■■□ 22.4
RPS3P23396 ATP5J-208ENST00000486002 876 ntTSL 213.64□□□□□ -0.233e-7■■■■□ 22.4
RPS3P23396 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.572e-8■■■■□ 22.4
RPS3P23396 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.82■□□□□ 0.282e-8■■■■□ 22.4
RPS3P23396 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC15.24■□□□□ 0.032e-8■■■■□ 22.4
RPS3P23396 TIMM17B-205ENST00000466995 1528 ntTSL 214.96□□□□□ -0.022e-8■■■■□ 22.4
RPS3P23396 TIMM17B-206ENST00000472645 804 ntTSL 314.94□□□□□ -0.022e-8■■■■□ 22.4
RPS3P23396 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC13.28□□□□□ -0.282e-8■■■■□ 22.4
RPS3P23396 MBNL3-209ENST00000442191 840 ntTSL 22.65□□□□□ -1.994e-7■■■■□ 22.4
RPS3P23396 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.15■□□□□ 0.669e-7■■■■□ 22.4
RPS3P23396 SIVA1-204ENST00000553810 550 ntTSL 318.41■□□□□ 0.549e-7■■■■□ 22.4
RPS3P23396 SIVA1-206ENST00000554013 461 ntTSL 1 (best)17.86■□□□□ 0.459e-7■■■■□ 22.4
RPS3P23396 IMPDH2-205ENST00000463903 420 ntTSL 212.18□□□□□ -0.465e-6■■■■□ 22.4
RPS3P23396 TMED7-203ENST00000508420 572 ntTSL 421.81■■□□□ 1.083e-10■■■■□ 22.4
RPS3P23396 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.133e-10■■■■□ 22.4
RPS3P23396 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.34■□□□□ 0.053e-10■■■■□ 22.4
RPS3P23396 TMED7-202ENST00000503010 805 ntTSL 213.79□□□□□ -0.23e-10■■■■□ 22.4
RPS3P23396 TMED7-201ENST00000456936 3757 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.323e-10■■■■□ 22.4
RPS3P23396 GAA-204ENST00000570803 956 ntTSL 518.74■□□□□ 0.591e-7■■■■□ 22.4
RPS3P23396 MRPS18B-209ENST00000492316 512 ntTSL 29.3□□□□□ -0.924e-8■■■■□ 22.4
RPS3P23396 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.694e-9■■■■□ 22.4
RPS3P23396 H3F3A-203ENST00000366815 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.74e-9■■■■□ 22.4
RPS3P23396 COPZ1-216ENST00000552848 537 ntTSL 59.65□□□□□ -0.861e-7■■■■□ 22.3
RPS3P23396 DDB1-211ENST00000538280 227 ntTSL 39.16□□□□□ -0.941e-11■■■■□ 22.3
RPS3P23396 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.12■□□□□ 0.491e-21■■■■□ 22.3
RPS3P23396 MCTS1-201ENST00000371315 1130 ntTSL 2 BASIC9.49□□□□□ -0.891e-6■■■■□ 22.3
RPS3P23396 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.331e-6■■■■□ 22.3
RPS3P23396 MCTS1-206ENST00000493274 732 ntTSL 33.66□□□□□ -1.821e-6■■■■□ 22.3
RPS3P23396 MCTS1-205ENST00000487133 766 ntTSL 51.28□□□□□ -2.21e-6■■■■□ 22.3
RPS3P23396 MRPL28-204ENST00000441883 800 ntTSL 526.06■■□□□ 1.762e-8■■■■□ 22.3
RPS3P23396 MRPL28-205ENST00000447696 722 ntTSL 323.28■■□□□ 1.322e-8■■■■□ 22.3
RPS3P23396 MRPL28-209ENST00000481453 2229 ntTSL 218.17■□□□□ 0.52e-8■■■■□ 22.3
RPS3P23396 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.322e-8■■■■□ 22.3
RPS3P23396 MRPL28-208ENST00000469744 1467 ntTSL 1 (best)16.93■□□□□ 0.32e-8■■■■□ 22.3
RPS3P23396 MRPL28-210ENST00000483764 1512 ntTSL 1 (best)16.93■□□□□ 0.32e-8■■■■□ 22.3
RPS3P23396 MRPL28-207ENST00000461550 1478 ntTSL 516.84■□□□□ 0.292e-8■■■■□ 22.3
RPS3P23396 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.142e-8■■■■□ 22.3
RPS3P23396 PFDN5-217ENST00000552548 497 ntTSL 26.93□□□□□ -1.32e-9■■■■□ 22.3
RPS3P23396 COL2A1-208ENST00000493991 3756 ntTSL 210.55□□□□□ -0.721e-6■■■■□ 22.3
RPS3P23396 C2-209ENST00000452323 1999 ntTSL 2 BASIC13.37□□□□□ -0.272e-7■■■■□ 22.3
RPS3P23396 C2-206ENST00000442278 2434 ntTSL 2 BASIC13.32□□□□□ -0.282e-7■■■■□ 22.3
RPS3P23396 C2-201ENST00000299367 2850 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.962e-7■■■■□ 22.3
RPS3P23396 RNASET2-212ENST00000510083 2280 ntTSL 215.55■□□□□ 0.081e-8■■■■□ 22.3
RPS3P23396 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.27e-7■■■■□ 22.3
RPS3P23396 F10-203ENST00000409306 1450 ntTSL 3 BASIC14.64□□□□□ -0.077e-7■■■■□ 22.3
RPS3P23396 F10-201ENST00000375551 1509 ntTSL 1 (best) BASIC12.78□□□□□ -0.367e-7■■■■□ 22.3
RPS3P23396 EPAS1-206ENST00000466465 3622 ntTSL 28.24□□□□□ -1.091e-6■■■■□ 22.3
RPS3P23396 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.326e-7■■■■□ 22.3
RPS3P23396 ATP5G1-210ENST00000515060 433 ntTSL 313.03□□□□□ -0.327e-12■■■■□ 22.3
RPS3P23396 ATP5G1-203ENST00000502964 679 ntTSL 29.78□□□□□ -0.847e-12■■■■□ 22.3
RPS3P23396 CPNE1-201ENST00000317677 1961 ntTSL 1 (best) BASIC12.78□□□□□ -0.361e-11■■■■□ 22.3
RPS3P23396 CTSH-218ENST00000615999 972 ntTSL 1 (best) BASIC12.45□□□□□ -0.425e-7■■■■□ 22.3
RPS3P23396 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.886e-8■■■■□ 22.3
RPS3P23396 ITIH3-209ENST00000493136 2179 ntTSL 213.86□□□□□ -0.194e-8■■■■□ 22.3
RPS3P23396 RUVBL2-207ENST00000595811 572 ntTSL 521.35■■□□□ 1.014e-9■■■■□ 22.3
RPS3P23396 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.221e-6■■■■□ 22.3
RPS3P23396 RNF103-205ENST00000472680 440 ntTSL 314.35□□□□□ -0.111e-6■■■■□ 22.3
RPS3P23396 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.281e-6■■■■□ 22.3
RPS3P23396 RNF103-206ENST00000477307 1293 ntTSL 410.52□□□□□ -0.731e-6■■■■□ 22.3
RPS3P23396 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.016e-7■■■■□ 22.3
RPS3P23396 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.266e-7■■■■□ 22.3
RPS3P23396 CAP1-208ENST00000414893 528 ntTSL 313.03□□□□□ -0.324e-7■■■■□ 22.3
RPS3P23396 CAP1-214ENST00000435719 817 ntTSL 312.82□□□□□ -0.364e-7■■■■□ 22.3
RPS3P23396 CAP1-204ENST00000372798 1563 ntAPPRIS ALT1 TSL 5 BASIC10.65□□□□□ -0.76e-7■■■■□ 22.3
RPS3P23396 CAP1-202ENST00000372792 1496 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.736e-7■■■■□ 22.3
RPS3P23396 CAP1-213ENST00000427843 739 ntTSL 510□□□□□ -0.815e-7■■■■□ 22.3
RPS3P23396 CAP1-201ENST00000340450 2592 ntAPPRIS ALT1 TSL 5 BASIC7.58□□□□□ -1.26e-7■■■■□ 22.3
RPS3P23396 CAP1-206ENST00000372805 2217 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.26e-7■■■■□ 22.3
RPS3P23396 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.344e-9■■■■□ 22.3
RPS3P23396 CRELD2-210ENST00000487969 2622 ntTSL 215.5■□□□□ 0.073e-7■■■■□ 22.3
RPS3P23396 CDC23-207ENST00000483961 549 ntTSL 414.69□□□□□ -0.065e-7■■■■□ 22.3
RPS3P23396 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC13.87□□□□□ -0.192e-7■■■■□ 22.3
RPS3P23396 CDC23-209ENST00000511383 584 ntTSL 312.12□□□□□ -0.475e-7■■■■□ 22.3
RPS3P23396 CDC23-206ENST00000482948 737 ntTSL 28.26□□□□□ -1.095e-7■■■■□ 22.3
RPS3P23396 TFRC-209ENST00000464368 569 ntTSL 49.27□□□□□ -0.931e-8■■■■□ 22.3
RPS3P23396 ATP5O-203ENST00000418933 415 ntTSL 55.54□□□□□ -1.529e-7■■■■□ 22.3
RPS3P23396 SERPIND1-202ENST00000406799 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.383e-8■■■■□ 22.3
RPS3P23396 SERPIND1-201ENST00000215727 2437 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.123e-8■■■■□ 22.3
RPS3P23396 CD63-204ENST00000546939 779 ntTSL 3 BASIC16.63■□□□□ 0.257e-8■■■■□ 22.3
RPS3P23396 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.52■□□□□ 0.247e-8■■■■□ 22.3
RPS3P23396 ABHD14A-ACY1-203ENST00000486081 1135 ntTSL 520.29■□□□□ 0.849e-7■■■■□ 22.3
RPS3P23396 ABHD14A-ACY1-209ENST00000635952 853 ntTSL 319.86■□□□□ 0.779e-7■■■■□ 22.3
RPS3P23396 ABHD14A-ACY1-222ENST00000637222 1048 ntTSL 518.51■□□□□ 0.559e-7■■■■□ 22.3
RPS3P23396 ABHD14A-ACY1-211ENST00000636085 1188 ntTSL 514.09□□□□□ -0.159e-7■■■■□ 22.3
RPS3P23396 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.083e-7■■■■□ 22.3
RPS3P23396 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.063e-7■■■■□ 22.3
RPS3P23396 CES1-201ENST00000360526 2006 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.323e-7■■■■□ 22.3
RPS3P23396 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.37■□□□□ 0.539e-8■■■■□ 22.3
RPS3P23396 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC14.5□□□□□ -0.099e-8■■■■□ 22.3
RPS3P23396 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC14.09□□□□□ -0.159e-8■■■■□ 22.3
RPS3P23396 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.329e-8■■■■□ 22.3
RPS3P23396 HYOU1-221ENST00000621959 3358 ntTSL 2 BASIC12.36□□□□□ -0.439e-8■■■■□ 22.3
RPS3P23396 HYOU1-217ENST00000612687 4360 ntTSL 5 BASIC12.31□□□□□ -0.449e-8■■■■□ 22.3
RPS3P23396 EIF3D-202ENST00000402116 581 ntTSL 39.26□□□□□ -0.932e-13■■■■□ 22.2
RPS3P23396 MMADHC-204ENST00000460311 324 ntTSL 26.5□□□□□ -1.372e-13■■■■□ 22.2
RPS3P23396 ETFA-220ENST00000565910 609 ntTSL 31.33□□□□□ -2.24e-8■■■■□ 22.2
Retrieved 100 of 24,271 protein–RNA pairs in 217 ms