RNA–Protein interactions for RNA: ENST00000482948.5

CDC23-206, Transcript of cell division cycle 23, humanhuman

TSL 2

Gene CDC23, Length 737 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC23-206ENST00000482948 NISCHQ9Y2I1 1504 aa18.62■□□□□ 0.57
CDC23-206ENST00000482948 ABCC9O60706 1549 aa17.27■□□□□ 0.36
CDC23-206ENST00000482948 DNAJC5BQ9UF47 199 aa17.11■□□□□ 0.33
CDC23-206ENST00000482948 CCDC180Q9P1Z9 1646 aa16.34■□□□□ 0.21
CDC23-206ENST00000482948 DNAJC5Q9H3Z4 198 aa16.26■□□□□ 0.19
CDC23-206ENST00000482948 AEBP2Q6ZN18 517 aaPredicted RBP15.98■□□□□ 0.15
CDC23-206ENST00000482948 CHIC1Q5VXU3 224 aa15.92■□□□□ 0.14
CDC23-206ENST00000482948 RB1CC1Q8TDY2 1594 aa15.87■□□□□ 0.13
CDC23-206ENST00000482948 UNC13AQ9UPW8 1703 aa15.86■□□□□ 0.13
CDC23-206ENST00000482948 PABPN1Q86U42 306 aaKnown RBP eCLIP15.86■□□□□ 0.13
CDC23-206ENST00000482948 ZCCHC6Q5VYS8 1495 aaKnown RBP15.7■□□□□ 0.1
CDC23-206ENST00000482948 BICRAQ9NZM4 1560 aa15.62■□□□□ 0.09
CDC23-206ENST00000482948 CECR2Q9BXF3 1484 aa15.58■□□□□ 0.08
CDC23-206ENST00000482948 CC2D2AQ9P2K1 1620 aa15.57■□□□□ 0.08
CDC23-206ENST00000482948 DCAF1Q9Y4B6 1507 aa15.52■□□□□ 0.07
CDC23-206ENST00000482948 NACADO15069 1562 aa15.46■□□□□ 0.07
CDC23-206ENST00000482948 MYO15BQ96JP2 1530 aa15.32■□□□□ 0.04
CDC23-206ENST00000482948 TRIM41Q8WV44 630 aa15.26■□□□□ 0.03
CDC23-206ENST00000482948 EIF4G1Q04637 1599 aaKnown RBP15.24■□□□□ 0.03
CDC23-206ENST00000482948 CUX2O14529 1486 aa15.14■□□□□ 0.01
CDC23-206ENST00000482948 DCAF8L2P0C7V8 631 aa15.14■□□□□ 0.01
CDC23-206ENST00000482948 SHROOM4Q9ULL8 1493 aa15.01□□□□□ -0.01
CDC23-206ENST00000482948 ERCC6Q03468 1493 aa14.88□□□□□ -0.03
CDC23-206ENST00000482948 SCRIBQ14160 1630 aa14.85□□□□□ -0.03
CDC23-206ENST00000482948 THOC2Q8NI27 1593 aaKnown RBP14.69□□□□□ -0.06
CDC23-206ENST00000482948 NESP48681 1621 aa14.61□□□□□ -0.07
CDC23-206ENST00000482948 SMARCA2P51531 1590 aa14.51□□□□□ -0.09
CDC23-206ENST00000482948 SUPT5HO00267 1087 aaKnown RBP14.5□□□□□ -0.09
CDC23-206ENST00000482948 KIF21AQ7Z4S6 1674 aa14.49□□□□□ -0.09
CDC23-206ENST00000482948 BAZ1AQ9NRL2 1556 aaPredicted RBP14.47□□□□□ -0.09
CDC23-206ENST00000482948 RIMBP3CA6NJZ7 1639 aa14.43□□□□□ -0.1
CDC23-206ENST00000482948 RIMBP3BA6NNM3 1639 aa14.43□□□□□ -0.1
CDC23-206ENST00000482948 RIMBP3Q9UFD9 1639 aa14.43□□□□□ -0.1
CDC23-206ENST00000482948 RSF1Q96T23 1441 aaPredicted RBP14.41□□□□□ -0.1
CDC23-206ENST00000482948 MROH2BQ7Z745 1585 aa14.32□□□□□ -0.12
CDC23-206ENST00000482948 SMARCA4P51532 1647 aa14.32□□□□□ -0.12
CDC23-206ENST00000482948 NCAPD3P42695 1498 aa14.25□□□□□ -0.13
CDC23-206ENST00000482948 WIZO95785 1651 aa14.23□□□□□ -0.13
CDC23-206ENST00000482948 PEG3Q9GZU2 1588 aa14.2□□□□□ -0.14
CDC23-206ENST00000482948 ILDR1Q86SU0 546 aaPredicted RBP14.19□□□□□ -0.14
CDC23-206ENST00000482948 ARHGEF11O15085 1522 aa14.19□□□□□ -0.14
CDC23-206ENST00000482948 TRHP20396 242 aaPredicted RBP14.18□□□□□ -0.14
CDC23-206ENST00000482948 TOP2AP11388 1531 aaKnown RBP14.17□□□□□ -0.14
CDC23-206ENST00000482948 LAMC3Q9Y6N6 1575 aa14.17□□□□□ -0.14
CDC23-206ENST00000482948 OSCARQ8IYS5 282 aa14.16□□□□□ -0.14
CDC23-206ENST00000482948 ATAD2BQ9ULI0 1458 aa14.15□□□□□ -0.14
CDC23-206ENST00000482948 HMGXB3Q12766 1538 aa14.15□□□□□ -0.14
CDC23-206ENST00000482948 PHF23Q9BUL5 403 aaPredicted RBP14.13□□□□□ -0.15
CDC23-206ENST00000482948 WDR62O43379 1518 aa14.13□□□□□ -0.15
CDC23-206ENST00000482948 MRC2Q9UBG0 1479 aa14.08□□□□□ -0.16
CDC23-206ENST00000482948 ARAP1Q96P48 1450 aa14.02□□□□□ -0.16
CDC23-206ENST00000482948 CYB5RLQ6IPT4 315 aa14.01□□□□□ -0.17
CDC23-206ENST00000482948 PDS5BQ9NTI5 1447 aa13.99□□□□□ -0.17
CDC23-206ENST00000482948 BAZ1BQ9UIG0 1483 aaKnown RBP13.96□□□□□ -0.17
CDC23-206ENST00000482948 CCDC88BA6NC98 1476 aa13.93□□□□□ -0.18
CDC23-206ENST00000482948 CHD1O14646 1710 aa13.87□□□□□ -0.19
CDC23-206ENST00000482948 CEP164Q9UPV0 1460 aa13.81□□□□□ -0.2
CDC23-206ENST00000482948 ZNF608Q9ULD9 1512 aaPredicted RBP13.77□□□□□ -0.21
CDC23-206ENST00000482948 URB2Q14146 1524 aaKnown RBP13.76□□□□□ -0.21
CDC23-206ENST00000482948 CADPSQ9ULU8 1353 aa13.75□□□□□ -0.21
CDC23-206ENST00000482948 PRDM2Q13029 1718 aa13.72□□□□□ -0.21
CDC23-206ENST00000482948 FANCD2Q9BXW9 1451 aa13.71□□□□□ -0.21
CDC23-206ENST00000482948 EIF4G3O43432 1585 aaKnown RBP13.69□□□□□ -0.22
CDC23-206ENST00000482948 ABCC8Q09428 1581 aa13.63□□□□□ -0.23
CDC23-206ENST00000482948 CFTRP13569 1480 aa13.61□□□□□ -0.23
CDC23-206ENST00000482948 WRNQ14191 1432 aaPredicted RBP eCLIP13.6□□□□□ -0.23
CDC23-206ENST00000482948 KIF13AQ9H1H9 1805 aa13.6□□□□□ -0.23
CDC23-206ENST00000482948 BIVM-ERCC5R4GMW8 1640 aa13.57□□□□□ -0.24
CDC23-206ENST00000482948 EEA1Q15075 1411 aa13.56□□□□□ -0.24
CDC23-206ENST00000482948 KDM4FA0A1W2PPD8 638 aa13.55□□□□□ -0.24
CDC23-206ENST00000482948 TOP2BQ02880 1626 aa13.54□□□□□ -0.24
CDC23-206ENST00000482948 CLASP1Q7Z460 1538 aa13.54□□□□□ -0.24
CDC23-206ENST00000482948 SYNJ1O43426 1573 aa13.54□□□□□ -0.24
CDC23-206ENST00000482948 IFT140Q96RY7 1462 aa13.51□□□□□ -0.25
CDC23-206ENST00000482948 HECW2Q9P2P5 1572 aa13.49□□□□□ -0.25
CDC23-206ENST00000482948 FBLN2P98095 1184 aa13.45□□□□□ -0.26
CDC23-206ENST00000482948 ERCC6L2Q5T890 1561 aa13.45□□□□□ -0.26
CDC23-206ENST00000482948 AQRO60306 1485 aaKnown RBP eCLIP13.44□□□□□ -0.26
CDC23-206ENST00000482948 CUX1P39880 1505 aa13.41□□□□□ -0.26
CDC23-206ENST00000482948 LMTK3Q96Q04 1460 aa13.4□□□□□ -0.26
CDC23-206ENST00000482948 TARBP1Q13395 1621 aaKnown RBP13.39□□□□□ -0.27
CDC23-206ENST00000482948 GAPVD1Q14C86 1478 aa13.39□□□□□ -0.27
CDC23-206ENST00000482948 KIF21BO75037 1637 aa13.38□□□□□ -0.27
CDC23-206ENST00000482948 TOPBP1Q92547 1522 aa13.38□□□□□ -0.27
CDC23-206ENST00000482948 SOGA1O94964 1423 aa13.37□□□□□ -0.27
CDC23-206ENST00000482948 LOC105371045A0A1W2PR82 267 aa13.35□□□□□ -0.27
CDC23-206ENST00000482948 DNMBPQ6XZF7 1577 aa13.34□□□□□ -0.27
CDC23-206ENST00000482948 SENP3Q9H4L4 574 aaPredicted RBP13.34□□□□□ -0.27
CDC23-206ENST00000482948 ILDR2Q71H61 639 aa13.33□□□□□ -0.28
CDC23-206ENST00000482948 FAM9AQ8IZU1 332 aaPredicted RBP13.33□□□□□ -0.28
CDC23-206ENST00000482948 GOLGA3Q08378 1498 aa13.32□□□□□ -0.28
CDC23-206ENST00000482948 KDM6BO15054 1643 aa13.31□□□□□ -0.28
CDC23-206ENST00000482948 TSPOAP1O95153 1857 aa13.31□□□□□ -0.28
CDC23-206ENST00000482948 SNAPC4Q5SXM2 1469 aa13.3□□□□□ -0.28
CDC23-206ENST00000482948 FBXO41Q8TF61 875 aa13.3□□□□□ -0.28
CDC23-206ENST00000482948 CSRNP3Q8WYN3 585 aa13.3□□□□□ -0.28
CDC23-206ENST00000482948 ERICH3Q5RHP9 1530 aa13.28□□□□□ -0.28
CDC23-206ENST00000482948 RUSC2Q8N2Y8 1516 aa13.28□□□□□ -0.28
CDC23-206ENST00000482948 TNIKQ9UKE5 1360 aa13.27□□□□□ -0.29
CDC23-206ENST00000482948 KIF27Q86VH2 1401 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms