RNA–Protein interactions for RNA: ENST00000511383.5

CDC23-209, Transcript of cell division cycle 23, humanhuman

TSL 3

Gene CDC23, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC23-209ENST00000511383 NISCHQ9Y2I1 1504 aa29.9■■■□□ 2.38
CDC23-209ENST00000511383 CCDC180Q9P1Z9 1646 aa26.55■■□□□ 1.84
CDC23-209ENST00000511383 ABCC9O60706 1549 aa25.86■■□□□ 1.73
CDC23-209ENST00000511383 ZCCHC6Q5VYS8 1495 aaKnown RBP24.94■■□□□ 1.58
CDC23-209ENST00000511383 NACADO15069 1562 aa24.92■■□□□ 1.58
CDC23-209ENST00000511383 RB1CC1Q8TDY2 1594 aa24.92■■□□□ 1.58
CDC23-209ENST00000511383 DCAF8L2P0C7V8 631 aa24.89■■□□□ 1.58
CDC23-209ENST00000511383 MYO15BQ96JP2 1530 aa24.81■■□□□ 1.56
CDC23-209ENST00000511383 DNAJC5BQ9UF47 199 aa24.77■■□□□ 1.56
CDC23-209ENST00000511383 DCAF1Q9Y4B6 1507 aa24.76■■□□□ 1.55
CDC23-209ENST00000511383 UNC13AQ9UPW8 1703 aa24.38■■□□□ 1.49
CDC23-209ENST00000511383 SCRIBQ14160 1630 aa24.22■■□□□ 1.47
CDC23-209ENST00000511383 BICRAQ9NZM4 1560 aa24.16■■□□□ 1.46
CDC23-209ENST00000511383 PABPN1Q86U42 306 aaKnown RBP eCLIP24.14■■□□□ 1.45
CDC23-209ENST00000511383 SHROOM4Q9ULL8 1493 aa23.92■■□□□ 1.42
CDC23-209ENST00000511383 EIF4G1Q04637 1599 aaKnown RBP23.51■■□□□ 1.35
CDC23-209ENST00000511383 CC2D2AQ9P2K1 1620 aa23.39■■□□□ 1.33
CDC23-209ENST00000511383 CECR2Q9BXF3 1484 aa23.34■■□□□ 1.33
CDC23-209ENST00000511383 DNAJC5Q9H3Z4 198 aa23.19■■□□□ 1.3
CDC23-209ENST00000511383 SMARCA4P51532 1647 aa23.19■■□□□ 1.3
CDC23-209ENST00000511383 BAZ1AQ9NRL2 1556 aaPredicted RBP23.17■■□□□ 1.3
CDC23-209ENST00000511383 MROH2BQ7Z745 1585 aa23.05■■□□□ 1.28
CDC23-209ENST00000511383 ATAD2BQ9ULI0 1458 aa23.01■■□□□ 1.27
CDC23-209ENST00000511383 SMARCA2P51531 1590 aa23■■□□□ 1.27
CDC23-209ENST00000511383 NCAPD3P42695 1498 aa22.98■■□□□ 1.27
CDC23-209ENST00000511383 PEG3Q9GZU2 1588 aa22.95■■□□□ 1.26
CDC23-209ENST00000511383 HMGXB3Q12766 1538 aa22.89■■□□□ 1.26
CDC23-209ENST00000511383 BAZ1BQ9UIG0 1483 aaKnown RBP22.83■■□□□ 1.25
CDC23-209ENST00000511383 RSF1Q96T23 1441 aaPredicted RBP22.82■■□□□ 1.24
CDC23-209ENST00000511383 WIZO95785 1651 aa22.81■■□□□ 1.24
CDC23-209ENST00000511383 TOP2AP11388 1531 aaKnown RBP22.57■■□□□ 1.2
CDC23-209ENST00000511383 CUX2O14529 1486 aa22.51■■□□□ 1.19
CDC23-209ENST00000511383 NESP48681 1621 aa22.39■■□□□ 1.18
CDC23-209ENST00000511383 ERCC6Q03468 1493 aa22.38■■□□□ 1.17
CDC23-209ENST00000511383 LAMC3Q9Y6N6 1575 aa22.37■■□□□ 1.17
CDC23-209ENST00000511383 CADPSQ9ULU8 1353 aa22.31■■□□□ 1.16
CDC23-209ENST00000511383 CCDC88BA6NC98 1476 aa22.3■■□□□ 1.16
CDC23-209ENST00000511383 SUPT5HO00267 1087 aaKnown RBP22.3■■□□□ 1.16
CDC23-209ENST00000511383 CFTRP13569 1480 aa22.22■■□□□ 1.15
CDC23-209ENST00000511383 PDS5BQ9NTI5 1447 aa22.2■■□□□ 1.14
CDC23-209ENST00000511383 KIF21AQ7Z4S6 1674 aa22.15■■□□□ 1.14
CDC23-209ENST00000511383 PRDM2Q13029 1718 aa22.09■■□□□ 1.13
CDC23-209ENST00000511383 FANCD2Q9BXW9 1451 aa22.06■■□□□ 1.12
CDC23-209ENST00000511383 THOC2Q8NI27 1593 aaKnown RBP22.05■■□□□ 1.12
CDC23-209ENST00000511383 CEP164Q9UPV0 1460 aa22.03■■□□□ 1.12
CDC23-209ENST00000511383 TRIM41Q8WV44 630 aa22.02■■□□□ 1.12
CDC23-209ENST00000511383 MRC2Q9UBG0 1479 aa21.97■■□□□ 1.11
CDC23-209ENST00000511383 WDR62O43379 1518 aa21.9■■□□□ 1.1
CDC23-209ENST00000511383 URB2Q14146 1524 aaKnown RBP21.84■■□□□ 1.09
CDC23-209ENST00000511383 TOPBP1Q92547 1522 aa21.73■■□□□ 1.07
CDC23-209ENST00000511383 ABCC8Q09428 1581 aa21.73■■□□□ 1.07
CDC23-209ENST00000511383 DNMBPQ6XZF7 1577 aa21.72■■□□□ 1.07
CDC23-209ENST00000511383 CUX1P39880 1505 aa21.61■■□□□ 1.05
CDC23-209ENST00000511383 IFT140Q96RY7 1462 aa21.56■■□□□ 1.04
CDC23-209ENST00000511383 POLA1P09884 1462 aaPredicted RBP21.55■■□□□ 1.04
CDC23-209ENST00000511383 FGD5Q6ZNL6 1462 aa21.52■■□□□ 1.03
CDC23-209ENST00000511383 WRNQ14191 1432 aaPredicted RBP eCLIP21.51■■□□□ 1.03
CDC23-209ENST00000511383 TARBP1Q13395 1621 aaKnown RBP21.49■■□□□ 1.03
CDC23-209ENST00000511383 BIVM-ERCC5R4GMW8 1640 aa21.47■■□□□ 1.03
CDC23-209ENST00000511383 SYNJ1O43426 1573 aa21.47■■□□□ 1.03
CDC23-209ENST00000511383 TOP2BQ02880 1626 aa21.47■■□□□ 1.03
CDC23-209ENST00000511383 SOGA1O94964 1423 aa21.46■■□□□ 1.03
CDC23-209ENST00000511383 RAD54L2Q9Y4B4 1467 aa21.45■■□□□ 1.03
CDC23-209ENST00000511383 ZNF608Q9ULD9 1512 aaPredicted RBP21.45■■□□□ 1.02
CDC23-209ENST00000511383 EIF4G3O43432 1585 aaKnown RBP21.39■■□□□ 1.01
CDC23-209ENST00000511383 WDR97A6NE52 1622 aa21.37■■□□□ 1.01
CDC23-209ENST00000511383 AQRO60306 1485 aaKnown RBP eCLIP21.34■■□□□ 1.01
CDC23-209ENST00000511383 OSCARQ8IYS5 282 aa21.33■■□□□ 1.01
CDC23-209ENST00000511383 ABCA10Q8WWZ4 1543 aa21.32■■□□□ 1
CDC23-209ENST00000511383 TDRD9Q8NDG6 1382 aaKnown RBP21.31■■□□□ 1
CDC23-209ENST00000511383 ABCA5Q8WWZ7 1642 aa21.24■□□□□ 0.99
CDC23-209ENST00000511383 GAPVD1Q14C86 1478 aa21.21■□□□□ 0.99
CDC23-209ENST00000511383 RIMBP3CA6NJZ7 1639 aa21.21■□□□□ 0.99
CDC23-209ENST00000511383 RIMBP3BA6NNM3 1639 aa21.21■□□□□ 0.99
CDC23-209ENST00000511383 RIMBP3Q9UFD9 1639 aa21.21■□□□□ 0.99
CDC23-209ENST00000511383 GRIN2BQ13224 1484 aa21.2■□□□□ 0.98
CDC23-209ENST00000511383 PBRM1Q86U86 1689 aa21.19■□□□□ 0.98
CDC23-209ENST00000511383 SNAPC4Q5SXM2 1469 aa21.16■□□□□ 0.98
CDC23-209ENST00000511383 MAGI1Q96QZ7 1491 aaPredicted RBP21.13■□□□□ 0.97
CDC23-209ENST00000511383 CHD1O14646 1710 aa21.09■□□□□ 0.97
CDC23-209ENST00000511383 ARHGEF11O15085 1522 aa21.07■□□□□ 0.96
CDC23-209ENST00000511383 ERICH3Q5RHP9 1530 aa21.07■□□□□ 0.96
CDC23-209ENST00000511383 KIF27Q86VH2 1401 aa21.04■□□□□ 0.96
CDC23-209ENST00000511383 FBLN2P98095 1184 aa21.04■□□□□ 0.96
CDC23-209ENST00000511383 SYNJ2O15056 1496 aa21.04■□□□□ 0.96
CDC23-209ENST00000511383 ADAMTS12P58397 1594 aa21.02■□□□□ 0.96
CDC23-209ENST00000511383 CHMP7Q8WUX9 453 aaPredicted RBP21.01■□□□□ 0.95
CDC23-209ENST00000511383 FHAD1B1AJZ9 1412 aa20.97■□□□□ 0.95
CDC23-209ENST00000511383 IGF1RP08069 1367 aa20.95■□□□□ 0.94
CDC23-209ENST00000511383 TRHP20396 242 aaPredicted RBP20.94■□□□□ 0.94
CDC23-209ENST00000511383 GRIN2AQ12879 1464 aa20.93■□□□□ 0.94
CDC23-209ENST00000511383 CYB5RLQ6IPT4 315 aa20.92■□□□□ 0.94
CDC23-209ENST00000511383 CUL7Q14999 1698 aa20.91■□□□□ 0.94
CDC23-209ENST00000511383 RUSC2Q8N2Y8 1516 aa20.9■□□□□ 0.94
CDC23-209ENST00000511383 CHIC1Q5VXU3 224 aa20.89■□□□□ 0.93
CDC23-209ENST00000511383 CLASP1Q7Z460 1538 aa20.87■□□□□ 0.93
CDC23-209ENST00000511383 NUP160Q12769 1436 aa20.83■□□□□ 0.93
CDC23-209ENST00000511383 CEP170Q5SW79 1584 aa20.83■□□□□ 0.92
CDC23-209ENST00000511383 CARMIL1Q5VZK9 1371 aa20.82■□□□□ 0.92
CDC23-209ENST00000511383 ARAP1Q96P48 1450 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms