RNA–Protein interactions for RNA: ENST00000371317.9

MCTS1-202, Transcript of MCTS1, re-initiation and release factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MCTS1, Length 1,018 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCTS1-202ENST00000371317 AEBP2Q6ZN18 517 aaPredicted RBP19.75■□□□□ 0.75
MCTS1-202ENST00000371317 CHIC1Q5VXU3 224 aa19.39■□□□□ 0.69
MCTS1-202ENST00000371317 PHF23Q9BUL5 403 aaPredicted RBP17.08■□□□□ 0.32
MCTS1-202ENST00000371317 SENP3Q9H4L4 574 aaPredicted RBP16.74■□□□□ 0.27
MCTS1-202ENST00000371317 NISCHQ9Y2I1 1504 aa16.29■□□□□ 0.2
MCTS1-202ENST00000371317 PLPPR3Q6T4P5 718 aa15.82■□□□□ 0.12
MCTS1-202ENST00000371317 FOXD1Q16676 465 aa15.54■□□□□ 0.08
MCTS1-202ENST00000371317 POTEDQ86YR6 584 aa15.49■□□□□ 0.07
MCTS1-202ENST00000371317 ADRA2BP18089 450 aa15.07■□□□□ 0
MCTS1-202ENST00000371317 PPP6R1Q9UPN7 881 aa15.05■□□□□ -0
MCTS1-202ENST00000371317 PIAS4Q8N2W9 510 aaPredicted RBP14.69□□□□□ -0.06
MCTS1-202ENST00000371317 CCDC180Q9P1Z9 1646 aa14.39□□□□□ -0.11
MCTS1-202ENST00000371317 MSH5O43196 834 aa14.27□□□□□ -0.13
MCTS1-202ENST00000371317 ABCC9O60706 1549 aa14.03□□□□□ -0.16
MCTS1-202ENST00000371317 PPP4R3CPQ6ZMV5 832 aa13.97□□□□□ -0.17
MCTS1-202ENST00000371317 SCAF1Q9H7N4 1312 aaKnown RBP13.79□□□□□ -0.2
MCTS1-202ENST00000371317 KCNA4P22459 653 aa13.76□□□□□ -0.21
MCTS1-202ENST00000371317 DCAF8L2P0C7V8 631 aa13.7□□□□□ -0.22
MCTS1-202ENST00000371317 MAPK8IP2Q13387 824 aaPredicted RBP13.65□□□□□ -0.22
MCTS1-202ENST00000371317 NCBP3Q53F19 620 aaKnown RBP13.64□□□□□ -0.23
MCTS1-202ENST00000371317 ZCCHC6Q5VYS8 1495 aaKnown RBP13.58□□□□□ -0.24
MCTS1-202ENST00000371317 CNKSR2Q8WXI2 1034 aa13.54□□□□□ -0.24
MCTS1-202ENST00000371317 NACADO15069 1562 aa13.54□□□□□ -0.24
MCTS1-202ENST00000371317 RB1CC1Q8TDY2 1594 aa13.52□□□□□ -0.25
MCTS1-202ENST00000371317 MYO15BQ96JP2 1530 aa13.47□□□□□ -0.25
MCTS1-202ENST00000371317 DCAF1Q9Y4B6 1507 aa13.46□□□□□ -0.25
MCTS1-202ENST00000371317 NPM3O75607 178 aaKnown RBP13.41□□□□□ -0.26
MCTS1-202ENST00000371317 DMRT2Q9Y5R5 561 aa13.37□□□□□ -0.27
MCTS1-202ENST00000371317 DNAJC5BQ9UF47 199 aa13.35□□□□□ -0.27
MCTS1-202ENST00000371317 RNF216Q9NWF9 866 aaPredicted RBP13.23□□□□□ -0.29
MCTS1-202ENST00000371317 UNC13AQ9UPW8 1703 aa13.2□□□□□ -0.3
MCTS1-202ENST00000371317 SCRIBQ14160 1630 aa13.19□□□□□ -0.3
MCTS1-202ENST00000371317 PABPN1Q86U42 306 aaKnown RBP eCLIP13.18□□□□□ -0.3
MCTS1-202ENST00000371317 SLC4A1APQ9BWU0 796 aaKnown RBP13.14□□□□□ -0.31
MCTS1-202ENST00000371317 HOXD11P31277 338 aaPredicted RBP13.13□□□□□ -0.31
MCTS1-202ENST00000371317 BICRAQ9NZM4 1560 aa13.08□□□□□ -0.32
MCTS1-202ENST00000371317 SHROOM4Q9ULL8 1493 aa13.03□□□□□ -0.32
MCTS1-202ENST00000371317 EHMT2Q96KQ7 1210 aa12.91□□□□□ -0.34
MCTS1-202ENST00000371317 DCAF8L1A6NGE4 600 aa12.88□□□□□ -0.35
MCTS1-202ENST00000371317 EIF4G1Q04637 1599 aaKnown RBP12.74□□□□□ -0.37
MCTS1-202ENST00000371317 CECR2Q9BXF3 1484 aa12.7□□□□□ -0.38
MCTS1-202ENST00000371317 CSRNP3Q8WYN3 585 aa12.69□□□□□ -0.38
MCTS1-202ENST00000371317 CC2D2AQ9P2K1 1620 aa12.67□□□□□ -0.38
MCTS1-202ENST00000371317 ZBTB22O15209 634 aa12.63□□□□□ -0.39
MCTS1-202ENST00000371317 SLC4A2P04920 1241 aa12.63□□□□□ -0.39
MCTS1-202ENST00000371317 BAZ1AQ9NRL2 1556 aaPredicted RBP12.62□□□□□ -0.39
MCTS1-202ENST00000371317 FOXD4L1Q9NU39 408 aa12.62□□□□□ -0.39
MCTS1-202ENST00000371317 SMARCA4P51532 1647 aa12.61□□□□□ -0.39
MCTS1-202ENST00000371317 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.58□□□□□ -0.4
MCTS1-202ENST00000371317 MROH2BQ7Z745 1585 aa12.56□□□□□ -0.4
MCTS1-202ENST00000371317 ATAD2BQ9ULI0 1458 aa12.53□□□□□ -0.4
MCTS1-202ENST00000371317 CACNB1Q02641 598 aaPredicted RBP12.52□□□□□ -0.41
MCTS1-202ENST00000371317 SMARCA2P51531 1590 aa12.51□□□□□ -0.41
MCTS1-202ENST00000371317 NCAPD3P42695 1498 aa12.49□□□□□ -0.41
MCTS1-202ENST00000371317 RSF1Q96T23 1441 aaPredicted RBP12.48□□□□□ -0.41
MCTS1-202ENST00000371317 DNAJC5Q9H3Z4 198 aa12.47□□□□□ -0.41
MCTS1-202ENST00000371317 PEG3Q9GZU2 1588 aa12.46□□□□□ -0.42
MCTS1-202ENST00000371317 BAZ1BQ9UIG0 1483 aaKnown RBP12.44□□□□□ -0.42
MCTS1-202ENST00000371317 WIZO95785 1651 aa12.44□□□□□ -0.42
MCTS1-202ENST00000371317 HMGXB3Q12766 1538 aa12.42□□□□□ -0.42
MCTS1-202ENST00000371317 MYCNP04198 464 aaPredicted RBP12.38□□□□□ -0.43
MCTS1-202ENST00000371317 SUPT5HO00267 1087 aaKnown RBP12.35□□□□□ -0.43
MCTS1-202ENST00000371317 U3KPZ7 1027 aaPredicted RBP12.34□□□□□ -0.43
MCTS1-202ENST00000371317 TOP2AP11388 1531 aaKnown RBP12.3□□□□□ -0.44
MCTS1-202ENST00000371317 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.24□□□□□ -0.45
MCTS1-202ENST00000371317 HNRNPUL2Q1KMD3 747 aaKnown RBP12.24□□□□□ -0.45
MCTS1-202ENST00000371317 RNF39Q9H2S5 420 aa12.23□□□□□ -0.45
MCTS1-202ENST00000371317 SAMD1Q6SPF0 538 aaPredicted RBP12.2□□□□□ -0.46
MCTS1-202ENST00000371317 CCDC88BA6NC98 1476 aa12.19□□□□□ -0.46
MCTS1-202ENST00000371317 NESP48681 1621 aa12.17□□□□□ -0.46
MCTS1-202ENST00000371317 ATXN8OSP0DMR3 200 aa12.16□□□□□ -0.46
MCTS1-202ENST00000371317 CADPSQ9ULU8 1353 aa12.16□□□□□ -0.46
MCTS1-202ENST00000371317 LAMC3Q9Y6N6 1575 aa12.13□□□□□ -0.47
MCTS1-202ENST00000371317 C1QBPQ07021 282 aaKnown RBP12.1□□□□□ -0.47
MCTS1-202ENST00000371317 ERCC6Q03468 1493 aa12.09□□□□□ -0.47
MCTS1-202ENST00000371317 APLP2Q06481 763 aa12.09□□□□□ -0.47
MCTS1-202ENST00000371317 PDS5BQ9NTI5 1447 aa12.09□□□□□ -0.47
MCTS1-202ENST00000371317 CFTRP13569 1480 aa12.08□□□□□ -0.47
MCTS1-202ENST00000371317 ATF5Q9Y2D1 282 aaPredicted RBP12.07□□□□□ -0.48
MCTS1-202ENST00000371317 CUX2O14529 1486 aa12.04□□□□□ -0.48
MCTS1-202ENST00000371317 FANCD2Q9BXW9 1451 aa12.02□□□□□ -0.49
MCTS1-202ENST00000371317 KIF21AQ7Z4S6 1674 aa12□□□□□ -0.49
MCTS1-202ENST00000371317 SPINK5Q9NQ38 1064 aaPredicted RBP11.99□□□□□ -0.49
MCTS1-202ENST00000371317 PRDM2Q13029 1718 aa11.99□□□□□ -0.49
MCTS1-202ENST00000371317 CEP164Q9UPV0 1460 aa11.98□□□□□ -0.49
MCTS1-202ENST00000371317 CAPN15O75808 1086 aa11.97□□□□□ -0.49
MCTS1-202ENST00000371317 TRHP20396 242 aaPredicted RBP11.94□□□□□ -0.5
MCTS1-202ENST00000371317 MRC2Q9UBG0 1479 aa11.93□□□□□ -0.5
MCTS1-202ENST00000371317 TRIM41Q8WV44 630 aa11.91□□□□□ -0.5
MCTS1-202ENST00000371317 THOC2Q8NI27 1593 aaKnown RBP11.91□□□□□ -0.5
MCTS1-202ENST00000371317 ZNF219Q9P2Y4 722 aaPredicted RBP11.89□□□□□ -0.51
MCTS1-202ENST00000371317 POTEHQ6S545 545 aa11.88□□□□□ -0.51
MCTS1-202ENST00000371317 URB2Q14146 1524 aaKnown RBP11.87□□□□□ -0.51
MCTS1-202ENST00000371317 WDR62O43379 1518 aa11.86□□□□□ -0.51
MCTS1-202ENST00000371317 ABCC8Q09428 1581 aa11.84□□□□□ -0.51
MCTS1-202ENST00000371317 TOPBP1Q92547 1522 aa11.83□□□□□ -0.52
MCTS1-202ENST00000371317 DNMBPQ6XZF7 1577 aa11.81□□□□□ -0.52
MCTS1-202ENST00000371317 CUX1P39880 1505 aa11.78□□□□□ -0.52
MCTS1-202ENST00000371317 WRNQ14191 1432 aaPredicted RBP eCLIP11.77□□□□□ -0.52
MCTS1-202ENST00000371317 POLA2Q14181 598 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms