RNA–Protein interactions for RNA: ENST00000371315.3

MCTS1-201, Transcript of MCTS1, re-initiation and release factor, humanhuman

TSL 2 BASIC

Gene MCTS1, Length 1,130 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCTS1-201ENST00000371315 AEBP2Q6ZN18 517 aaPredicted RBP24.82■■□□□ 1.56
MCTS1-201ENST00000371315 NISCHQ9Y2I1 1504 aa24.81■■□□□ 1.56
MCTS1-201ENST00000371315 CHIC1Q5VXU3 224 aa23.61■■□□□ 1.37
MCTS1-201ENST00000371315 ABCC9O60706 1549 aa22.41■■□□□ 1.18
MCTS1-201ENST00000371315 CCDC180Q9P1Z9 1646 aa22.35■■□□□ 1.17
MCTS1-201ENST00000371315 RB1CC1Q8TDY2 1594 aa21.31■■□□□ 1
MCTS1-201ENST00000371315 SENP3Q9H4L4 574 aaPredicted RBP21.23■□□□□ 0.99
MCTS1-201ENST00000371315 NACADO15069 1562 aa21.14■□□□□ 0.97
MCTS1-201ENST00000371315 DNAJC5BQ9UF47 199 aa21.12■□□□□ 0.97
MCTS1-201ENST00000371315 DCAF8L2P0C7V8 631 aa20.92■□□□□ 0.94
MCTS1-201ENST00000371315 PHF23Q9BUL5 403 aaPredicted RBP20.92■□□□□ 0.94
MCTS1-201ENST00000371315 UNC13AQ9UPW8 1703 aa20.84■□□□□ 0.93
MCTS1-201ENST00000371315 PABPN1Q86U42 306 aaKnown RBP eCLIP20.83■□□□□ 0.93
MCTS1-201ENST00000371315 MYO15BQ96JP2 1530 aa20.82■□□□□ 0.92
MCTS1-201ENST00000371315 BICRAQ9NZM4 1560 aa20.7■□□□□ 0.9
MCTS1-201ENST00000371315 ZCCHC6Q5VYS8 1495 aaKnown RBP20.55■□□□□ 0.88
MCTS1-201ENST00000371315 DCAF1Q9Y4B6 1507 aa20.51■□□□□ 0.87
MCTS1-201ENST00000371315 SHROOM4Q9ULL8 1493 aa20.43■□□□□ 0.86
MCTS1-201ENST00000371315 SCRIBQ14160 1630 aa20.33■□□□□ 0.84
MCTS1-201ENST00000371315 CC2D2AQ9P2K1 1620 aa20.27■□□□□ 0.83
MCTS1-201ENST00000371315 CECR2Q9BXF3 1484 aa20.21■□□□□ 0.83
MCTS1-201ENST00000371315 EIF4G1Q04637 1599 aaKnown RBP20.2■□□□□ 0.82
MCTS1-201ENST00000371315 FOXD1Q16676 465 aa19.74■□□□□ 0.75
MCTS1-201ENST00000371315 NCAPD3P42695 1498 aa19.5■□□□□ 0.71
MCTS1-201ENST00000371315 DNAJC5Q9H3Z4 198 aa19.49■□□□□ 0.71
MCTS1-201ENST00000371315 ATAD2BQ9ULI0 1458 aa19.43■□□□□ 0.7
MCTS1-201ENST00000371315 CUX2O14529 1486 aa19.4■□□□□ 0.7
MCTS1-201ENST00000371315 SMARCA4P51532 1647 aa19.39■□□□□ 0.69
MCTS1-201ENST00000371315 SMARCA2P51531 1590 aa19.37■□□□□ 0.69
MCTS1-201ENST00000371315 HMGXB3Q12766 1538 aa19.36■□□□□ 0.69
MCTS1-201ENST00000371315 ERCC6Q03468 1493 aa19.36■□□□□ 0.69
MCTS1-201ENST00000371315 BAZ1AQ9NRL2 1556 aaPredicted RBP19.27■□□□□ 0.67
MCTS1-201ENST00000371315 NESP48681 1621 aa19.23■□□□□ 0.67
MCTS1-201ENST00000371315 BAZ1BQ9UIG0 1483 aaKnown RBP19.22■□□□□ 0.67
MCTS1-201ENST00000371315 PEG3Q9GZU2 1588 aa19.21■□□□□ 0.67
MCTS1-201ENST00000371315 MROH2BQ7Z745 1585 aa19.11■□□□□ 0.65
MCTS1-201ENST00000371315 LAMC3Q9Y6N6 1575 aa19.1■□□□□ 0.65
MCTS1-201ENST00000371315 THOC2Q8NI27 1593 aaKnown RBP19.09■□□□□ 0.65
MCTS1-201ENST00000371315 KIF21AQ7Z4S6 1674 aa18.99■□□□□ 0.63
MCTS1-201ENST00000371315 PDS5BQ9NTI5 1447 aa18.98■□□□□ 0.63
MCTS1-201ENST00000371315 CADPSQ9ULU8 1353 aa18.9■□□□□ 0.62
MCTS1-201ENST00000371315 PLPPR3Q6T4P5 718 aa18.89■□□□□ 0.61
MCTS1-201ENST00000371315 WIZO95785 1651 aa18.89■□□□□ 0.61
MCTS1-201ENST00000371315 MRC2Q9UBG0 1479 aa18.82■□□□□ 0.6
MCTS1-201ENST00000371315 WDR62O43379 1518 aa18.79■□□□□ 0.6
MCTS1-201ENST00000371315 CEP164Q9UPV0 1460 aa18.72■□□□□ 0.59
MCTS1-201ENST00000371315 FANCD2Q9BXW9 1451 aa18.69■□□□□ 0.58
MCTS1-201ENST00000371315 CFTRP13569 1480 aa18.67■□□□□ 0.58
MCTS1-201ENST00000371315 RSF1Q96T23 1441 aaPredicted RBP18.66■□□□□ 0.58
MCTS1-201ENST00000371315 TOP2AP11388 1531 aaKnown RBP18.64■□□□□ 0.58
MCTS1-201ENST00000371315 TRIM41Q8WV44 630 aa18.56■□□□□ 0.56
MCTS1-201ENST00000371315 URB2Q14146 1524 aaKnown RBP18.54■□□□□ 0.56
MCTS1-201ENST00000371315 MSH5O43196 834 aa18.53■□□□□ 0.56
MCTS1-201ENST00000371315 PRDM2Q13029 1718 aa18.51■□□□□ 0.55
MCTS1-201ENST00000371315 PIAS4Q8N2W9 510 aaPredicted RBP18.48■□□□□ 0.55
MCTS1-201ENST00000371315 OSCARQ8IYS5 282 aa18.45■□□□□ 0.54
MCTS1-201ENST00000371315 PPP6R1Q9UPN7 881 aa18.44■□□□□ 0.54
MCTS1-201ENST00000371315 CCDC88BA6NC98 1476 aa18.41■□□□□ 0.54
MCTS1-201ENST00000371315 ADRA2BP18089 450 aa18.39■□□□□ 0.53
MCTS1-201ENST00000371315 IFT140Q96RY7 1462 aa18.35■□□□□ 0.53
MCTS1-201ENST00000371315 ZNF608Q9ULD9 1512 aaPredicted RBP18.33■□□□□ 0.53
MCTS1-201ENST00000371315 TOPBP1Q92547 1522 aa18.33■□□□□ 0.52
MCTS1-201ENST00000371315 ABCC8Q09428 1581 aa18.28■□□□□ 0.52
MCTS1-201ENST00000371315 RIMBP3CA6NJZ7 1639 aa18.27■□□□□ 0.51
MCTS1-201ENST00000371315 RIMBP3BA6NNM3 1639 aa18.27■□□□□ 0.51
MCTS1-201ENST00000371315 RIMBP3Q9UFD9 1639 aa18.27■□□□□ 0.51
MCTS1-201ENST00000371315 DNMBPQ6XZF7 1577 aa18.25■□□□□ 0.51
MCTS1-201ENST00000371315 EIF4G3O43432 1585 aaKnown RBP18.24■□□□□ 0.51
MCTS1-201ENST00000371315 TARBP1Q13395 1621 aaKnown RBP18.19■□□□□ 0.5
MCTS1-201ENST00000371315 ARHGEF11O15085 1522 aa18.18■□□□□ 0.5
MCTS1-201ENST00000371315 AQRO60306 1485 aaKnown RBP eCLIP18.14■□□□□ 0.49
MCTS1-201ENST00000371315 CHD1O14646 1710 aa18.13■□□□□ 0.49
MCTS1-201ENST00000371315 POLA1P09884 1462 aaPredicted RBP18.13■□□□□ 0.49
MCTS1-201ENST00000371315 RAD54L2Q9Y4B4 1467 aa18.05■□□□□ 0.48
MCTS1-201ENST00000371315 POTEDQ86YR6 584 aa18.03■□□□□ 0.48
MCTS1-201ENST00000371315 SOGA1O94964 1423 aa18.03■□□□□ 0.48
MCTS1-201ENST00000371315 CYB5RLQ6IPT4 315 aa18.02■□□□□ 0.48
MCTS1-201ENST00000371315 FBLN2P98095 1184 aa18.01■□□□□ 0.47
MCTS1-201ENST00000371315 WDR97A6NE52 1622 aa18.01■□□□□ 0.47
MCTS1-201ENST00000371315 TDRD9Q8NDG6 1382 aaKnown RBP18■□□□□ 0.47
MCTS1-201ENST00000371315 ARAP1Q96P48 1450 aa18■□□□□ 0.47
MCTS1-201ENST00000371315 FGD5Q6ZNL6 1462 aa17.99■□□□□ 0.47
MCTS1-201ENST00000371315 CUX1P39880 1505 aa17.98■□□□□ 0.47
MCTS1-201ENST00000371315 SNAPC4Q5SXM2 1469 aa17.97■□□□□ 0.47
MCTS1-201ENST00000371315 CLASP1Q7Z460 1538 aa17.93■□□□□ 0.46
MCTS1-201ENST00000371315 MAGI1Q96QZ7 1491 aaPredicted RBP17.92■□□□□ 0.46
MCTS1-201ENST00000371315 GRIN2BQ13224 1484 aa17.9■□□□□ 0.46
MCTS1-201ENST00000371315 SYNJ1O43426 1573 aa17.89■□□□□ 0.45
MCTS1-201ENST00000371315 CHMP7Q8WUX9 453 aaPredicted RBP17.87■□□□□ 0.45
MCTS1-201ENST00000371315 SYNJ2O15056 1496 aa17.86■□□□□ 0.45
MCTS1-201ENST00000371315 PBRM1Q86U86 1689 aa17.84■□□□□ 0.45
MCTS1-201ENST00000371315 TRHP20396 242 aaPredicted RBP17.84■□□□□ 0.45
MCTS1-201ENST00000371315 GAPVD1Q14C86 1478 aa17.82■□□□□ 0.44
MCTS1-201ENST00000371315 ABCA5Q8WWZ7 1642 aa17.8■□□□□ 0.44
MCTS1-201ENST00000371315 ABCA10Q8WWZ4 1543 aa17.79■□□□□ 0.44
MCTS1-201ENST00000371315 SUPT5HO00267 1087 aaKnown RBP17.7■□□□□ 0.42
MCTS1-201ENST00000371315 WRNQ14191 1432 aaPredicted RBP eCLIP17.68■□□□□ 0.42
MCTS1-201ENST00000371315 BIVM-ERCC5R4GMW8 1640 aa17.67■□□□□ 0.42
MCTS1-201ENST00000371315 GRIN2AQ12879 1464 aa17.67■□□□□ 0.42
MCTS1-201ENST00000371315 ADAMTS12P58397 1594 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms