RNA–Protein interactions for RNA: ENST00000561048.1

PPIB-203, Transcript of peptidylprolyl isomerase B, humanhuman

TSL 1 (best)

Gene PPIB, Length 1,208 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPIB-203ENST00000561048 NISCHQ9Y2I1 1504 aa33.59■■■□□ 2.97
PPIB-203ENST00000561048 ABCC9O60706 1549 aa30.93■■■□□ 2.54
PPIB-203ENST00000561048 CCDC180Q9P1Z9 1646 aa30.29■■■□□ 2.44
PPIB-203ENST00000561048 DNAJC5BQ9UF47 199 aa29.54■■■□□ 2.32
PPIB-203ENST00000561048 RB1CC1Q8TDY2 1594 aa29.14■■■□□ 2.26
PPIB-203ENST00000561048 NACADO15069 1562 aa28.82■■■□□ 2.2
PPIB-203ENST00000561048 PABPN1Q86U42 306 aaKnown RBP eCLIP28.77■■■□□ 2.2
PPIB-203ENST00000561048 DCAF8L2P0C7V8 631 aa28.7■■■□□ 2.18
PPIB-203ENST00000561048 UNC13AQ9UPW8 1703 aa28.42■■■□□ 2.14
PPIB-203ENST00000561048 BICRAQ9NZM4 1560 aa28.33■■■□□ 2.12
PPIB-203ENST00000561048 MYO15BQ96JP2 1530 aa28.24■■■□□ 2.11
PPIB-203ENST00000561048 CECR2Q9BXF3 1484 aa27.91■■■□□ 2.06
PPIB-203ENST00000561048 CC2D2AQ9P2K1 1620 aa27.86■■■□□ 2.05
PPIB-203ENST00000561048 SHROOM4Q9ULL8 1493 aa27.85■■■□□ 2.05
PPIB-203ENST00000561048 ZCCHC6Q5VYS8 1495 aaKnown RBP27.71■■■□□ 2.03
PPIB-203ENST00000561048 DCAF1Q9Y4B6 1507 aa27.68■■■□□ 2.02
PPIB-203ENST00000561048 EIF4G1Q04637 1599 aaKnown RBP27.68■■■□□ 2.02
PPIB-203ENST00000561048 SCRIBQ14160 1630 aa27.63■■■□□ 2.01
PPIB-203ENST00000561048 DNAJC5Q9H3Z4 198 aa27.49■■□□□ 1.99
PPIB-203ENST00000561048 CUX2O14529 1486 aa26.83■■□□□ 1.89
PPIB-203ENST00000561048 ERCC6Q03468 1493 aa26.74■■□□□ 1.87
PPIB-203ENST00000561048 NCAPD3P42695 1498 aa26.65■■□□□ 1.86
PPIB-203ENST00000561048 ATAD2BQ9ULI0 1458 aa26.49■■□□□ 1.83
PPIB-203ENST00000561048 NESP48681 1621 aa26.42■■□□□ 1.82
PPIB-203ENST00000561048 HMGXB3Q12766 1538 aa26.36■■□□□ 1.81
PPIB-203ENST00000561048 SMARCA2P51531 1590 aa26.35■■□□□ 1.81
PPIB-203ENST00000561048 SMARCA4P51532 1647 aa26.29■■□□□ 1.8
PPIB-203ENST00000561048 BAZ1BQ9UIG0 1483 aaKnown RBP26.2■■□□□ 1.78
PPIB-203ENST00000561048 THOC2Q8NI27 1593 aaKnown RBP26.19■■□□□ 1.78
PPIB-203ENST00000561048 BAZ1AQ9NRL2 1556 aaPredicted RBP26.09■■□□□ 1.77
PPIB-203ENST00000561048 LAMC3Q9Y6N6 1575 aa26.09■■□□□ 1.77
PPIB-203ENST00000561048 TRIM41Q8WV44 630 aa26.09■■□□□ 1.77
PPIB-203ENST00000561048 PEG3Q9GZU2 1588 aa26.03■■□□□ 1.76
PPIB-203ENST00000561048 PDS5BQ9NTI5 1447 aa26■■□□□ 1.75
PPIB-203ENST00000561048 KIF21AQ7Z4S6 1674 aa25.99■■□□□ 1.75
PPIB-203ENST00000561048 MROH2BQ7Z745 1585 aa25.89■■□□□ 1.73
PPIB-203ENST00000561048 CADPSQ9ULU8 1353 aa25.83■■□□□ 1.73
PPIB-203ENST00000561048 MRC2Q9UBG0 1479 aa25.79■■□□□ 1.72
PPIB-203ENST00000561048 WDR62O43379 1518 aa25.73■■□□□ 1.71
PPIB-203ENST00000561048 OSCARQ8IYS5 282 aa25.59■■□□□ 1.69
PPIB-203ENST00000561048 CEP164Q9UPV0 1460 aa25.59■■□□□ 1.69
PPIB-203ENST00000561048 WIZO95785 1651 aa25.53■■□□□ 1.68
PPIB-203ENST00000561048 FANCD2Q9BXW9 1451 aa25.53■■□□□ 1.68
PPIB-203ENST00000561048 CFTRP13569 1480 aa25.4■■□□□ 1.66
PPIB-203ENST00000561048 URB2Q14146 1524 aaKnown RBP25.34■■□□□ 1.65
PPIB-203ENST00000561048 RIMBP3CA6NJZ7 1639 aa25.24■■□□□ 1.63
PPIB-203ENST00000561048 RIMBP3BA6NNM3 1639 aa25.24■■□□□ 1.63
PPIB-203ENST00000561048 RIMBP3Q9UFD9 1639 aa25.24■■□□□ 1.63
PPIB-203ENST00000561048 RSF1Q96T23 1441 aaPredicted RBP25.19■■□□□ 1.62
PPIB-203ENST00000561048 TOP2AP11388 1531 aaKnown RBP25.17■■□□□ 1.62
PPIB-203ENST00000561048 ZNF608Q9ULD9 1512 aaPredicted RBP25.13■■□□□ 1.61
PPIB-203ENST00000561048 ARHGEF11O15085 1522 aa25.12■■□□□ 1.61
PPIB-203ENST00000561048 IFT140Q96RY7 1462 aa25.1■■□□□ 1.61
PPIB-203ENST00000561048 CYB5RLQ6IPT4 315 aa25.05■■□□□ 1.6
PPIB-203ENST00000561048 PRDM2Q13029 1718 aa24.98■■□□□ 1.59
PPIB-203ENST00000561048 TOPBP1Q92547 1522 aa24.97■■□□□ 1.59
PPIB-203ENST00000561048 TRHP20396 242 aaPredicted RBP24.95■■□□□ 1.58
PPIB-203ENST00000561048 CCDC88BA6NC98 1476 aa24.94■■□□□ 1.58
PPIB-203ENST00000561048 EIF4G3O43432 1585 aaKnown RBP24.91■■□□□ 1.58
PPIB-203ENST00000561048 AQRO60306 1485 aaKnown RBP eCLIP24.87■■□□□ 1.573e-9■■■■■ 35.8
PPIB-203ENST00000561048 ABCC8Q09428 1581 aa24.86■■□□□ 1.57
PPIB-203ENST00000561048 ARAP1Q96P48 1450 aa24.84■■□□□ 1.57
PPIB-203ENST00000561048 FBLN2P98095 1184 aa24.84■■□□□ 1.57
PPIB-203ENST00000561048 DNMBPQ6XZF7 1577 aa24.81■■□□□ 1.56
PPIB-203ENST00000561048 CHD1O14646 1710 aa24.81■■□□□ 1.56
PPIB-203ENST00000561048 TARBP1Q13395 1621 aaKnown RBP24.76■■□□□ 1.55
PPIB-203ENST00000561048 POLA1P09884 1462 aaPredicted RBP24.69■■□□□ 1.54
PPIB-203ENST00000561048 TDRD9Q8NDG6 1382 aaKnown RBP24.64■■□□□ 1.53
PPIB-203ENST00000561048 RAD54L2Q9Y4B4 1467 aa24.64■■□□□ 1.53
PPIB-203ENST00000561048 AEBP2Q6ZN18 517 aaPredicted RBP24.6■■□□□ 1.53
PPIB-203ENST00000561048 SOGA1O94964 1423 aa24.6■■□□□ 1.53
PPIB-203ENST00000561048 SNAPC4Q5SXM2 1469 aa24.56■■□□□ 1.52
PPIB-203ENST00000561048 CHMP7Q8WUX9 453 aaPredicted RBP24.55■■□□□ 1.52
PPIB-203ENST00000561048 CLASP1Q7Z460 1538 aa24.54■■□□□ 1.52
PPIB-203ENST00000561048 SYNJ1O43426 1573 aa24.47■■□□□ 1.51
PPIB-203ENST00000561048 FGD5Q6ZNL6 1462 aa24.46■■□□□ 1.51
PPIB-203ENST00000561048 MAGI1Q96QZ7 1491 aaPredicted RBP24.45■■□□□ 1.5
PPIB-203ENST00000561048 WDR97A6NE52 1622 aa24.43■■□□□ 1.5
PPIB-203ENST00000561048 GRIN2BQ13224 1484 aa24.41■■□□□ 1.5
PPIB-203ENST00000561048 SYNJ2O15056 1496 aa24.39■■□□□ 1.5
PPIB-203ENST00000561048 GAPVD1Q14C86 1478 aa24.36■■□□□ 1.49
PPIB-203ENST00000561048 CUX1P39880 1505 aa24.35■■□□□ 1.49
PPIB-203ENST00000561048 PBRM1Q86U86 1689 aa24.21■■□□□ 1.47
PPIB-203ENST00000561048 ERCC6L2Q5T890 1561 aa24.16■■□□□ 1.46
PPIB-203ENST00000561048 ABCA10Q8WWZ4 1543 aa24.15■■□□□ 1.46
PPIB-203ENST00000561048 ABCA5Q8WWZ7 1642 aa24.12■■□□□ 1.45
PPIB-203ENST00000561048 GRIN2AQ12879 1464 aa24.1■■□□□ 1.45
PPIB-203ENST00000561048 CEP170Q5SW79 1584 aa24.05■■□□□ 1.44
PPIB-203ENST00000561048 NUP160Q12769 1436 aa24.03■■□□□ 1.44
PPIB-203ENST00000561048 ADAMTS12P58397 1594 aa23.98■■□□□ 1.43
PPIB-203ENST00000561048 WRNQ14191 1432 aaPredicted RBP eCLIP23.97■■□□□ 1.43
PPIB-203ENST00000561048 SHROOM2Q13796 1616 aa23.95■■□□□ 1.42
PPIB-203ENST00000561048 FHAD1B1AJZ9 1412 aa23.93■■□□□ 1.42
PPIB-203ENST00000561048 KIF13AQ9H1H9 1805 aa23.9■■□□□ 1.42
PPIB-203ENST00000561048 PRG4Q92954 1404 aaPredicted RBP23.89■■□□□ 1.41
PPIB-203ENST00000561048 FAM69CQ0P6D2 419 aa23.85■■□□□ 1.41
PPIB-203ENST00000561048 SUPT5HO00267 1087 aaKnown RBP23.84■■□□□ 1.41
PPIB-203ENST00000561048 JPH4Q96JJ6 628 aa23.84■■□□□ 1.41
PPIB-203ENST00000561048 ERICH3Q5RHP9 1530 aa23.81■■□□□ 1.4
PPIB-203ENST00000561048 NPM1P06748 294 aaKnown RBP eCLIP23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 158.8 ms