RNA–Protein interactions for RNA: ENST00000402116.2

EIF3D-202, Transcript of eukaryotic translation initiation factor 3 subunit D, humanhuman

TSL 3

Gene EIF3D, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3D-202ENST00000402116 NISCHQ9Y2I1 1504 aa25.52■■□□□ 1.68
EIF3D-202ENST00000402116 ABCC9O60706 1549 aa23.77■■□□□ 1.4
EIF3D-202ENST00000402116 CCDC180Q9P1Z9 1646 aa23.12■■□□□ 1.29
EIF3D-202ENST00000402116 DNAJC5BQ9UF47 199 aa22.71■■□□□ 1.23
EIF3D-202ENST00000402116 RB1CC1Q8TDY2 1594 aa22.33■■□□□ 1.17
EIF3D-202ENST00000402116 DCAF8L2P0C7V8 631 aa22.09■■□□□ 1.13
EIF3D-202ENST00000402116 PABPN1Q86U42 306 aaKnown RBP eCLIP22.09■■□□□ 1.13
EIF3D-202ENST00000402116 NACADO15069 1562 aa22■■□□□ 1.11
EIF3D-202ENST00000402116 UNC13AQ9UPW8 1703 aa21.81■■□□□ 1.08
EIF3D-202ENST00000402116 BICRAQ9NZM4 1560 aa21.61■■□□□ 1.05
EIF3D-202ENST00000402116 CECR2Q9BXF3 1484 aa21.44■■□□□ 1.02
EIF3D-202ENST00000402116 MYO15BQ96JP2 1530 aa21.42■■□□□ 1.02
EIF3D-202ENST00000402116 CC2D2AQ9P2K1 1620 aa21.39■■□□□ 1.01
EIF3D-202ENST00000402116 DNAJC5Q9H3Z4 198 aa21.29■■□□□ 1
EIF3D-202ENST00000402116 SHROOM4Q9ULL8 1493 aa21.24■□□□□ 0.99
EIF3D-202ENST00000402116 EIF4G1Q04637 1599 aaKnown RBP21.18■□□□□ 0.98
EIF3D-202ENST00000402116 SCRIBQ14160 1630 aa21.14■□□□□ 0.97
EIF3D-202ENST00000402116 ZCCHC6Q5VYS8 1495 aaKnown RBP20.99■□□□□ 0.95
EIF3D-202ENST00000402116 DCAF1Q9Y4B6 1507 aa20.96■□□□□ 0.95
EIF3D-202ENST00000402116 CUX2O14529 1486 aa20.63■□□□□ 0.89
EIF3D-202ENST00000402116 ERCC6Q03468 1493 aa20.62■□□□□ 0.89
EIF3D-202ENST00000402116 TRIM41Q8WV44 630 aa20.3■□□□□ 0.84
EIF3D-202ENST00000402116 NCAPD3P42695 1498 aa20.3■□□□□ 0.84
EIF3D-202ENST00000402116 NESP48681 1621 aa20.23■□□□□ 0.83
EIF3D-202ENST00000402116 ATAD2BQ9ULI0 1458 aa20.18■□□□□ 0.82
EIF3D-202ENST00000402116 SMARCA2P51531 1590 aa20.13■□□□□ 0.81
EIF3D-202ENST00000402116 HMGXB3Q12766 1538 aa20.09■□□□□ 0.81
EIF3D-202ENST00000402116 THOC2Q8NI27 1593 aaKnown RBP20.05■□□□□ 0.8
EIF3D-202ENST00000402116 SMARCA4P51532 1647 aa20.04■□□□□ 0.8
EIF3D-202ENST00000402116 BAZ1BQ9UIG0 1483 aaKnown RBP20.03■□□□□ 0.8
EIF3D-202ENST00000402116 LAMC3Q9Y6N6 1575 aa19.96■□□□□ 0.79
EIF3D-202ENST00000402116 KIF21AQ7Z4S6 1674 aa19.96■□□□□ 0.79
EIF3D-202ENST00000402116 PDS5BQ9NTI5 1447 aa19.93■□□□□ 0.78
EIF3D-202ENST00000402116 BAZ1AQ9NRL2 1556 aaPredicted RBP19.87■□□□□ 0.77
EIF3D-202ENST00000402116 PEG3Q9GZU2 1588 aa19.75■□□□□ 0.75
EIF3D-202ENST00000402116 MRC2Q9UBG0 1479 aa19.75■□□□□ 0.75
EIF3D-202ENST00000402116 OSCARQ8IYS5 282 aa19.73■□□□□ 0.75
EIF3D-202ENST00000402116 CADPSQ9ULU8 1353 aa19.71■□□□□ 0.75
EIF3D-202ENST00000402116 MROH2BQ7Z745 1585 aa19.67■□□□□ 0.74
EIF3D-202ENST00000402116 WDR62O43379 1518 aa19.66■□□□□ 0.74
EIF3D-202ENST00000402116 CEP164Q9UPV0 1460 aa19.59■□□□□ 0.73
EIF3D-202ENST00000402116 FANCD2Q9BXW9 1451 aa19.51■□□□□ 0.71
EIF3D-202ENST00000402116 WIZO95785 1651 aa19.45■□□□□ 0.7
EIF3D-202ENST00000402116 RIMBP3CA6NJZ7 1639 aa19.44■□□□□ 0.7
EIF3D-202ENST00000402116 RIMBP3BA6NNM3 1639 aa19.44■□□□□ 0.7
EIF3D-202ENST00000402116 RIMBP3Q9UFD9 1639 aa19.44■□□□□ 0.7
EIF3D-202ENST00000402116 TRHP20396 242 aaPredicted RBP19.39■□□□□ 0.69
EIF3D-202ENST00000402116 CYB5RLQ6IPT4 315 aa19.34■□□□□ 0.69
EIF3D-202ENST00000402116 URB2Q14146 1524 aaKnown RBP19.34■□□□□ 0.69
EIF3D-202ENST00000402116 CFTRP13569 1480 aa19.32■□□□□ 0.68
EIF3D-202ENST00000402116 ARHGEF11O15085 1522 aa19.31■□□□□ 0.68
EIF3D-202ENST00000402116 AEBP2Q6ZN18 517 aaPredicted RBP19.27■□□□□ 0.68
EIF3D-202ENST00000402116 ZNF608Q9ULD9 1512 aaPredicted RBP19.21■□□□□ 0.67
EIF3D-202ENST00000402116 IFT140Q96RY7 1462 aa19.2■□□□□ 0.66
EIF3D-202ENST00000402116 FBLN2P98095 1184 aa19.17■□□□□ 0.66
EIF3D-202ENST00000402116 PRDM2Q13029 1718 aa19.14■□□□□ 0.65
EIF3D-202ENST00000402116 TOP2AP11388 1531 aaKnown RBP19.12■□□□□ 0.65
EIF3D-202ENST00000402116 CHD1O14646 1710 aa19.08■□□□□ 0.65
EIF3D-202ENST00000402116 EIF4G3O43432 1585 aaKnown RBP19.07■□□□□ 0.64
EIF3D-202ENST00000402116 ARAP1Q96P48 1450 aa19.06■□□□□ 0.64
EIF3D-202ENST00000402116 RSF1Q96T23 1441 aaPredicted RBP19.06■□□□□ 0.64
EIF3D-202ENST00000402116 TOPBP1Q92547 1522 aa19.05■□□□□ 0.64
EIF3D-202ENST00000402116 AQRO60306 1485 aaKnown RBP eCLIP19.01■□□□□ 0.632e-10■■■■■ 95.1
EIF3D-202ENST00000402116 ABCC8Q09428 1581 aa19■□□□□ 0.63
EIF3D-202ENST00000402116 CCDC88BA6NC98 1476 aa18.94■□□□□ 0.62
EIF3D-202ENST00000402116 DNMBPQ6XZF7 1577 aa18.93■□□□□ 0.62
EIF3D-202ENST00000402116 TARBP1Q13395 1621 aaKnown RBP18.89■□□□□ 0.61
EIF3D-202ENST00000402116 CHMP7Q8WUX9 453 aaPredicted RBP18.87■□□□□ 0.61
EIF3D-202ENST00000402116 TDRD9Q8NDG6 1382 aaKnown RBP18.83■□□□□ 0.61
EIF3D-202ENST00000402116 POLA1P09884 1462 aaPredicted RBP18.81■□□□□ 0.6
EIF3D-202ENST00000402116 RAD54L2Q9Y4B4 1467 aa18.8■□□□□ 0.6
EIF3D-202ENST00000402116 SOGA1O94964 1423 aa18.79■□□□□ 0.6
EIF3D-202ENST00000402116 SYNJ1O43426 1573 aa18.79■□□□□ 0.6
EIF3D-202ENST00000402116 SNAPC4Q5SXM2 1469 aa18.78■□□□□ 0.6
EIF3D-202ENST00000402116 CLASP1Q7Z460 1538 aa18.74■□□□□ 0.59
EIF3D-202ENST00000402116 MAGI1Q96QZ7 1491 aaPredicted RBP18.69■□□□□ 0.58
EIF3D-202ENST00000402116 GAPVD1Q14C86 1478 aa18.68■□□□□ 0.58
EIF3D-202ENST00000402116 GRIN2BQ13224 1484 aa18.65■□□□□ 0.58
EIF3D-202ENST00000402116 FGD5Q6ZNL6 1462 aa18.65■□□□□ 0.58
EIF3D-202ENST00000402116 WDR97A6NE52 1622 aa18.64■□□□□ 0.57
EIF3D-202ENST00000402116 SYNJ2O15056 1496 aa18.64■□□□□ 0.57
EIF3D-202ENST00000402116 PBRM1Q86U86 1689 aa18.56■□□□□ 0.56
EIF3D-202ENST00000402116 CUX1P39880 1505 aa18.51■□□□□ 0.55
EIF3D-202ENST00000402116 ERCC6L2Q5T890 1561 aa18.47■□□□□ 0.55
EIF3D-202ENST00000402116 KIF13AQ9H1H9 1805 aa18.41■□□□□ 0.54
EIF3D-202ENST00000402116 CEP170Q5SW79 1584 aa18.4■□□□□ 0.54
EIF3D-202ENST00000402116 GRIN2AQ12879 1464 aa18.39■□□□□ 0.54
EIF3D-202ENST00000402116 NPM1P06748 294 aaKnown RBP eCLIP18.37■□□□□ 0.53
EIF3D-202ENST00000402116 FAM69CQ0P6D2 419 aa18.37■□□□□ 0.53
EIF3D-202ENST00000402116 ABCA5Q8WWZ7 1642 aa18.37■□□□□ 0.53
EIF3D-202ENST00000402116 ABCA10Q8WWZ4 1543 aa18.36■□□□□ 0.53
EIF3D-202ENST00000402116 ILDR1Q86SU0 546 aaPredicted RBP18.34■□□□□ 0.53
EIF3D-202ENST00000402116 NUP160Q12769 1436 aa18.3■□□□□ 0.52
EIF3D-202ENST00000402116 ADAMTS12P58397 1594 aa18.3■□□□□ 0.52
EIF3D-202ENST00000402116 PRG4Q92954 1404 aaPredicted RBP18.28■□□□□ 0.52
EIF3D-202ENST00000402116 SHROOM2Q13796 1616 aa18.27■□□□□ 0.52
EIF3D-202ENST00000402116 FHAD1B1AJZ9 1412 aa18.25■□□□□ 0.51
EIF3D-202ENST00000402116 WRNQ14191 1432 aaPredicted RBP eCLIP18.25■□□□□ 0.51
EIF3D-202ENST00000402116 KDM4FA0A1W2PPD8 638 aa18.25■□□□□ 0.51
EIF3D-202ENST00000402116 JPH4Q96JJ6 628 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms