RNA–Protein interactions for RNA: ENST00000481453.5

MRPL28-209, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 2

Gene MRPL28, Length 2,229 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-209ENST00000481453 NISCHQ9Y2I1 1504 aa40.68■■■■■ 4.1
MRPL28-209ENST00000481453 CCDC180Q9P1Z9 1646 aa35.22■■■■□ 3.23
MRPL28-209ENST00000481453 ZCCHC6Q5VYS8 1495 aaKnown RBP34.28■■■■□ 3.08
MRPL28-209ENST00000481453 DCAF1Q9Y4B6 1507 aa33.59■■■□□ 2.97
MRPL28-209ENST00000481453 SHROOM4Q9ULL8 1493 aa33.57■■■□□ 2.96
MRPL28-209ENST00000481453 DCAF8L2P0C7V8 631 aa33.44■■■□□ 2.94
MRPL28-209ENST00000481453 ABCC9O60706 1549 aa33■■■□□ 2.87
MRPL28-209ENST00000481453 MYO15BQ96JP2 1530 aa33■■■□□ 2.87
MRPL28-209ENST00000481453 NACADO15069 1562 aa32.69■■■□□ 2.82
MRPL28-209ENST00000481453 SCRIBQ14160 1630 aa32.54■■■□□ 2.8
MRPL28-209ENST00000481453 SUPT5HO00267 1087 aaKnown RBP32.45■■■□□ 2.79
MRPL28-209ENST00000481453 RB1CC1Q8TDY2 1594 aa32.31■■■□□ 2.76
MRPL28-209ENST00000481453 UNC13AQ9UPW8 1703 aa31.8■■■□□ 2.68
MRPL28-209ENST00000481453 RSF1Q96T23 1441 aaPredicted RBP31.75■■■□□ 2.67
MRPL28-209ENST00000481453 CECR2Q9BXF3 1484 aa31.65■■■□□ 2.66
MRPL28-209ENST00000481453 MROH2BQ7Z745 1585 aa31.5■■■□□ 2.63
MRPL28-209ENST00000481453 BICRAQ9NZM4 1560 aa31.45■■■□□ 2.63
MRPL28-209ENST00000481453 BAZ1AQ9NRL2 1556 aaPredicted RBP31.34■■■□□ 2.61
MRPL28-209ENST00000481453 CHIC1Q5VXU3 224 aa31.31■■■□□ 2.6
MRPL28-209ENST00000481453 WIZO95785 1651 aa31.27■■■□□ 2.6
MRPL28-209ENST00000481453 PABPN1Q86U42 306 aaKnown RBP eCLIP31.22■■■□□ 2.595e-7■■■■■ 28.2
MRPL28-209ENST00000481453 SMARCA4P51532 1647 aa31.19■■■□□ 2.58
MRPL28-209ENST00000481453 TOP2AP11388 1531 aaKnown RBP30.9■■■□□ 2.54
MRPL28-209ENST00000481453 PEG3Q9GZU2 1588 aa30.77■■■□□ 2.52
MRPL28-209ENST00000481453 SMARCA2P51531 1590 aa30.66■■■□□ 2.5
MRPL28-209ENST00000481453 EIF4G1Q04637 1599 aaKnown RBP30.64■■■□□ 2.5
MRPL28-209ENST00000481453 CCDC88BA6NC98 1476 aa30.62■■■□□ 2.49
MRPL28-209ENST00000481453 ATAD2BQ9ULI0 1458 aa30.57■■■□□ 2.48
MRPL28-209ENST00000481453 TRIM41Q8WV44 630 aa30.42■■■□□ 2.46
MRPL28-209ENST00000481453 BAZ1BQ9UIG0 1483 aaKnown RBP30.39■■■□□ 2.46
MRPL28-209ENST00000481453 NCAPD3P42695 1498 aa30.2■■■□□ 2.43
MRPL28-209ENST00000481453 HMGXB3Q12766 1538 aa30.19■■■□□ 2.42
MRPL28-209ENST00000481453 LOC105371045A0A1W2PR82 267 aa30.17■■■□□ 2.42
MRPL28-209ENST00000481453 ABCC8Q09428 1581 aa30.16■■■□□ 2.42
MRPL28-209ENST00000481453 FAM9AQ8IZU1 332 aaPredicted RBP29.95■■■□□ 2.39
MRPL28-209ENST00000481453 CC2D2AQ9P2K1 1620 aa29.87■■■□□ 2.37
MRPL28-209ENST00000481453 WRNQ14191 1432 aaPredicted RBP eCLIP29.83■■■□□ 2.37
MRPL28-209ENST00000481453 SYNJ1O43426 1573 aa29.77■■■□□ 2.36
MRPL28-209ENST00000481453 SOGA1O94964 1423 aa29.67■■■□□ 2.34
MRPL28-209ENST00000481453 CFTRP13569 1480 aa29.67■■■□□ 2.34
MRPL28-209ENST00000481453 HRCP23327 699 aa29.63■■■□□ 2.33
MRPL28-209ENST00000481453 PCGF6Q9BYE7 350 aa29.61■■■□□ 2.33
MRPL28-209ENST00000481453 RUSC2Q8N2Y8 1516 aa29.57■■■□□ 2.32
MRPL28-209ENST00000481453 EEA1Q15075 1411 aa29.56■■■□□ 2.32
MRPL28-209ENST00000481453 EHMT2Q96KQ7 1210 aa29.56■■■□□ 2.32
MRPL28-209ENST00000481453 TOP2BQ02880 1626 aa29.56■■■□□ 2.32
MRPL28-209ENST00000481453 PRDM2Q13029 1718 aa29.54■■■□□ 2.32
MRPL28-209ENST00000481453 BIVM-ERCC5R4GMW8 1640 aa29.53■■■□□ 2.32
MRPL28-209ENST00000481453 CADPSQ9ULU8 1353 aa29.45■■■□□ 2.31
MRPL28-209ENST00000481453 CUX1P39880 1505 aa29.42■■■□□ 2.3
MRPL28-209ENST00000481453 CSRNP3Q8WYN3 585 aa29.41■■■□□ 2.3
MRPL28-209ENST00000481453 KIF21BO75037 1637 aa29.24■■■□□ 2.27
MRPL28-209ENST00000481453 GOLGA3Q08378 1498 aa29.23■■■□□ 2.27
MRPL28-209ENST00000481453 TNIKQ9UKE5 1360 aa29.22■■■□□ 2.27
MRPL28-209ENST00000481453 CEP164Q9UPV0 1460 aa29.18■■■□□ 2.26
MRPL28-209ENST00000481453 NESP48681 1621 aa29.16■■■□□ 2.26
MRPL28-209ENST00000481453 FANCD2Q9BXW9 1451 aa29.16■■■□□ 2.26
MRPL28-209ENST00000481453 CEP162Q5TB80 1403 aa29.14■■■□□ 2.25
MRPL28-209ENST00000481453 DNAJC5BQ9UF47 199 aa29.11■■■□□ 2.25
MRPL28-209ENST00000481453 TRIM26Q12899 539 aaPredicted RBP29.09■■■□□ 2.25
MRPL28-209ENST00000481453 LAMC3Q9Y6N6 1575 aa29.08■■■□□ 2.25
MRPL28-209ENST00000481453 UBTFP17480 764 aaKnown RBP29.06■■■□□ 2.24
MRPL28-209ENST00000481453 RAPGEF2Q9Y4G8 1499 aa29.04■■■□□ 2.24
MRPL28-209ENST00000481453 KIF27Q86VH2 1401 aa29■■■□□ 2.23
MRPL28-209ENST00000481453 FGD5Q6ZNL6 1462 aa29■■■□□ 2.23
MRPL28-209ENST00000481453 PRXQ9BXM0 1461 aa28.98■■■□□ 2.23
MRPL28-209ENST00000481453 DNMBPQ6XZF7 1577 aa28.96■■■□□ 2.23
MRPL28-209ENST00000481453 PPARGC1BQ86YN6 1023 aaKnown RBP28.94■■■□□ 2.22
MRPL28-209ENST00000481453 ERICH3Q5RHP9 1530 aa28.94■■■□□ 2.22
MRPL28-209ENST00000481453 TOPBP1Q92547 1522 aa28.9■■■□□ 2.22
MRPL28-209ENST00000481453 CUX2O14529 1486 aa28.88■■■□□ 2.21
MRPL28-209ENST00000481453 PDS5BQ9NTI5 1447 aa28.81■■■□□ 2.2
MRPL28-209ENST00000481453 URB2Q14146 1524 aaKnown RBP28.81■■■□□ 2.2
MRPL28-209ENST00000481453 POLA1P09884 1462 aaPredicted RBP28.8■■■□□ 2.2
MRPL28-209ENST00000481453 CLIP1P30622 1438 aa28.79■■■□□ 2.2
MRPL28-209ENST00000481453 KIF21AQ7Z4S6 1674 aa28.78■■■□□ 2.2
MRPL28-209ENST00000481453 IGF1RP08069 1367 aa28.76■■■□□ 2.19
MRPL28-209ENST00000481453 RAD54L2Q9Y4B4 1467 aa28.74■■■□□ 2.19
MRPL28-209ENST00000481453 ABCA10Q8WWZ4 1543 aa28.73■■■□□ 2.19
MRPL28-209ENST00000481453 WDR97A6NE52 1622 aa28.65■■■□□ 2.18
MRPL28-209ENST00000481453 VPS8Q8N3P4 1428 aa28.6■■■□□ 2.17
MRPL28-209ENST00000481453 CARMIL1Q5VZK9 1371 aa28.59■■■□□ 2.17
MRPL28-209ENST00000481453 RANGAP1P46060 587 aaPredicted RBP28.53■■■□□ 2.16
MRPL28-209ENST00000481453 ARAP1Q96P48 1450 aa28.52■■■□□ 2.16
MRPL28-209ENST00000481453 ZEB1P37275 1124 aaPredicted RBP28.5■■■□□ 2.15
MRPL28-209ENST00000481453 ABCA5Q8WWZ7 1642 aa28.5■■■□□ 2.15
MRPL28-209ENST00000481453 MRC2Q9UBG0 1479 aa28.47■■■□□ 2.15
MRPL28-209ENST00000481453 CUL7Q14999 1698 aa28.46■■■□□ 2.15
MRPL28-209ENST00000481453 TARBP1Q13395 1621 aaKnown RBP28.46■■■□□ 2.15
MRPL28-209ENST00000481453 ARHGAP35Q9NRY4 1499 aa28.42■■■□□ 2.14
MRPL28-209ENST00000481453 TDRD9Q8NDG6 1382 aaKnown RBP28.4■■■□□ 2.14
MRPL28-209ENST00000481453 TTBK1Q5TCY1 1321 aaPredicted RBP28.4■■■□□ 2.14
MRPL28-209ENST00000481453 GAPVD1Q14C86 1478 aa28.37■■■□□ 2.13
MRPL28-209ENST00000481453 WDR62O43379 1518 aa28.33■■■□□ 2.13
MRPL28-209ENST00000481453 CTTNBP2Q8WZ74 1663 aa28.24■■■□□ 2.11
MRPL28-209ENST00000481453 PBRM1Q86U86 1689 aa28.22■■■□□ 2.11
MRPL28-209ENST00000481453 APLP2Q06481 763 aa28.2■■■□□ 2.11
MRPL28-209ENST00000481453 THOC2Q8NI27 1593 aaKnown RBP28.18■■■□□ 2.1
MRPL28-209ENST00000481453 ERCC6Q03468 1493 aa28.17■■■□□ 2.1
MRPL28-209ENST00000481453 IFT140Q96RY7 1462 aa28.17■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 195.7 ms