Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.252e-10■■■□□ 14.7
NCBP2P52298 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.242e-10■■■□□ 14.7
NCBP2P52298 INS-IGF2-205ENST00000641326 2861 ntAPPRIS P1 BASIC11.3□□□□□ -0.62e-10■■■□□ 14.7
NCBP2P52298 HBG2-201ENST00000336906 602 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.933e-15■■■□□ 14.7
NCBP2P52298 HBG2-204ENST00000444587 307 ntTSL 2 BASIC6.56□□□□□ -1.363e-15■■■□□ 14.7
NCBP2P52298 RNF4-205ENST00000504224 560 ntTSL 419.41■□□□□ 0.75e-11■■■□□ 14.7
NCBP2P52298 RNF4-204ENST00000503659 558 ntTSL 416.7■□□□□ 0.265e-11■■■□□ 14.7
NCBP2P52298 RNF4-209ENST00000507784 582 ntTSL 216.44■□□□□ 0.225e-11■■■□□ 14.7
NCBP2P52298 RNF4-213ENST00000509388 569 ntTSL 313.88□□□□□ -0.195e-11■■■□□ 14.7
NCBP2P52298 RNF4-208ENST00000507247 616 ntTSL 1 (best)13.28□□□□□ -0.285e-11■■■□□ 14.7
NCBP2P52298 RNF4-202ENST00000502316 855 ntTSL 213.17□□□□□ -0.35e-11■■■□□ 14.7
NCBP2P52298 RNF4-215ENST00000511843 586 ntTSL 512.18□□□□□ -0.465e-11■■■□□ 14.7
NCBP2P52298 RNF4-201ENST00000314289 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.535e-11■■■□□ 14.7
NCBP2P52298 RNF4-222ENST00000541204 2796 ntTSL 1 (best) BASIC11.74□□□□□ -0.535e-11■■■□□ 14.7
NCBP2P52298 RNF4-206ENST00000504782 614 ntTSL 211.61□□□□□ -0.555e-11■■■□□ 14.7
NCBP2P52298 RNF4-216ENST00000511859 1373 ntTSL 1 (best) BASIC10.14□□□□□ -0.795e-11■■■□□ 14.7
NCBP2P52298 RNF4-212ENST00000509258 893 ntTSL 1 (best) BASIC9.89□□□□□ -0.835e-11■■■□□ 14.7
NCBP2P52298 RNF4-218ENST00000513284 517 ntTSL 49.79□□□□□ -0.845e-11■■■□□ 14.7
NCBP2P52298 RNF4-221ENST00000513643 516 ntTSL 38.9□□□□□ -0.985e-11■■■□□ 14.7
NCBP2P52298 RNF4-203ENST00000503123 298 ntTSL 58.07□□□□□ -1.125e-11■■■□□ 14.7
NCBP2P52298 RNF4-220ENST00000513578 545 ntTSL 47.89□□□□□ -1.155e-11■■■□□ 14.7
NCBP2P52298 RNF4-217ENST00000511892 547 ntTSL 45.29□□□□□ -1.565e-11■■■□□ 14.7
NCBP2P52298 RNF4-211ENST00000509206 490 ntTSL 33.25□□□□□ -1.895e-11■■■□□ 14.7
NCBP2P52298 FAF2-205ENST00000510730 684 ntTSL 317.8■□□□□ 0.442e-7■■■□□ 14.7
NCBP2P52298 FAF2-201ENST00000261942 4515 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.212e-7■■■□□ 14.7
NCBP2P52298 FAF2-203ENST00000506061 337 ntTSL 34.38□□□□□ -1.712e-7■■■□□ 14.7
NCBP2P52298 SEPT9-219ENST00000588575 559 ntTSL 418.73■□□□□ 0.592e-6■■■□□ 14.7
NCBP2P52298 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.172e-6■■■□□ 14.7
NCBP2P52298 SEPT9-201ENST00000329047 4453 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.522e-6■■■□□ 14.7
NCBP2P52298 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.16■□□□□ 0.984e-10■■■□□ 14.7
NCBP2P52298 ERRFI1-205ENST00000487559 787 ntTSL 221.16■□□□□ 0.984e-10■■■□□ 14.7
NCBP2P52298 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.89■□□□□ 0.934e-10■■■□□ 14.7
NCBP2P52298 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.074e-10■■■□□ 14.7
NCBP2P52298 ASPSCR1-210ENST00000581608 2387 ntTSL 219.43■□□□□ 0.72e-10■■■□□ 14.7
NCBP2P52298 SLC25A39-216ENST00000592857 837 ntTSL 319.19■□□□□ 0.662e-6■■■□□ 14.7
NCBP2P52298 SLC2A9-206ENST00000505104 1659 ntTSL 1 (best)16.21■□□□□ 0.184e-14■■■□□ 14.7
NCBP2P52298 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.014e-14■■■□□ 14.7
NCBP2P52298 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.034e-14■■■□□ 14.7
NCBP2P52298 SLC2A9-208ENST00000506583 1927 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.444e-14■■■□□ 14.7
NCBP2P52298 SLC2A9-213ENST00000513129 738 ntTSL 39.53□□□□□ -0.884e-14■■■□□ 14.7
NCBP2P52298 SEPT9-207ENST00000449803 3996 ntTSL 2 BASIC12.2□□□□□ -0.462e-6■■■□□ 14.7
NCBP2P52298 SEPT9-206ENST00000431235 4004 ntTSL 5 BASIC11.27□□□□□ -0.62e-6■■■□□ 14.7
NCBP2P52298 ANTXR1-204ENST00000463335 1437 ntTSL 1 (best)19.54■□□□□ 0.726e-17■■■□□ 14.7
NCBP2P52298 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.13■□□□□ 0.656e-17■■■□□ 14.7
NCBP2P52298 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.44■□□□□ 0.546e-17■■■□□ 14.7
NCBP2P52298 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.26e-17■■■□□ 14.7
NCBP2P52298 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC22.17■■□□□ 1.143e-6■■■□□ 14.7
NCBP2P52298 ATP9B-207ENST00000586672 583 ntTSL 413.4□□□□□ -0.262e-7■■■□□ 14.7
NCBP2P52298 ATP9B-213ENST00000588600 427 ntTSL 513.3□□□□□ -0.282e-7■■■□□ 14.7
NCBP2P52298 ATP9B-225ENST00000591464 565 ntTSL 412.7□□□□□ -0.382e-7■■■□□ 14.7
NCBP2P52298 ATP9B-201ENST00000307671 3533 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.82e-7■■■□□ 14.7
NCBP2P52298 ATP9B-202ENST00000426216 4361 ntTSL 5 BASIC8.66□□□□□ -1.022e-7■■■□□ 14.7
NCBP2P52298 ATP9B-208ENST00000586722 1650 ntTSL 1 (best) BASIC7.35□□□□□ -1.232e-7■■■□□ 14.7
NCBP2P52298 ATP9B-206ENST00000586366 2845 ntTSL 26.71□□□□□ -1.342e-7■■■□□ 14.7
NCBP2P52298 FGFR3-209ENST00000507588 336 ntTSL 1 (best)17.02■□□□□ 0.324e-11■■■□□ 14.6
NCBP2P52298 FGFR3-207ENST00000474521 545 ntTSL 216.3■□□□□ 0.24e-11■■■□□ 14.6
NCBP2P52298 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.036e-10■■■□□ 14.6
NCBP2P52298 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.442e-6■■■□□ 14.6
NCBP2P52298 SEPT9-210ENST00000585929 906 ntTSL 414□□□□□ -0.172e-6■■■□□ 14.6
NCBP2P52298 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC13.49□□□□□ -0.252e-6■■■□□ 14.6
NCBP2P52298 SEPT9-213ENST00000586433 569 ntTSL 411.31□□□□□ -0.62e-6■■■□□ 14.6
NCBP2P52298 SEPT9-221ENST00000588958 879 ntTSL 215.27■□□□□ 0.042e-6■■■□□ 14.6
NCBP2P52298 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.152e-6■■■□□ 14.6
NCBP2P52298 SEPT9-212ENST00000586128 752 ntTSL 413.01□□□□□ -0.332e-6■■■□□ 14.6
NCBP2P52298 SEPT9-239ENST00000591704 749 ntTSL 210.72□□□□□ -0.692e-6■■■□□ 14.6
NCBP2P52298 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.757e-6■■■□□ 14.6
NCBP2P52298 QSER1-203ENST00000527250 448 ntTSL 31.35□□□□□ -2.197e-6■■■□□ 14.6
NCBP2P52298 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.35e-7■■■□□ 14.6
NCBP2P52298 SETD5-209ENST00000431285 1824 ntTSL 522.68■■□□□ 1.222e-13■■■□□ 14.6
NCBP2P52298 SETD5-212ENST00000450326 921 ntTSL 314.21□□□□□ -0.132e-13■■■□□ 14.6
NCBP2P52298 SETD5-203ENST00000402198 6827 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.752e-13■■■□□ 14.6
NCBP2P52298 FNBP1L-202ENST00000271234 4212 ntAPPRIS P4 TSL 5 BASIC10.13□□□□□ -0.797e-8■■■□□ 14.6
NCBP2P52298 FNBP1L-201ENST00000260506 5341 ntAPPRIS ALT1 TSL 1 (best) BASIC9.69□□□□□ -0.867e-8■■■□□ 14.6
NCBP2P52298 HP1BP3-211ENST00000443615 557 ntTSL 319.54■□□□□ 0.722e-14■■■□□ 14.6
NCBP2P52298 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.94■□□□□ 0.462e-14■■■□□ 14.6
NCBP2P52298 HP1BP3-206ENST00000419490 538 ntTSL 417.57■□□□□ 0.42e-14■■■□□ 14.6
NCBP2P52298 HP1BP3-204ENST00000414993 727 ntTSL 414.08□□□□□ -0.162e-14■■■□□ 14.6
NCBP2P52298 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.262e-14■■■□□ 14.6
NCBP2P52298 SLC39A10-204ENST00000418005 563 ntTSL 420.97■□□□□ 0.953e-6■■■□□ 14.6
NCBP2P52298 PPIG-208ENST00000462903 1516 ntTSL 1 (best) BASIC10.17□□□□□ -0.781e-10■■■□□ 14.6
NCBP2P52298 PPIG-202ENST00000409714 2615 ntTSL 1 (best) BASIC9.83□□□□□ -0.841e-10■■■□□ 14.6
NCBP2P52298 PPIG-211ENST00000530152 690 ntTSL 39.06□□□□□ -0.961e-10■■■□□ 14.6
NCBP2P52298 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.641e-10■■■□□ 14.6
NCBP2P52298 PPIG-206ENST00000433207 1485 ntTSL 1 (best)3.97□□□□□ -1.771e-10■■■□□ 14.6
NCBP2P52298 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.941e-10■■■□□ 14.6
NCBP2P52298 NFATC2IP-202ENST00000562977 638 ntTSL 423.69■■□□□ 1.381e-10■■□□□ 14.5
NCBP2P52298 NFATC2IP-204ENST00000565752 823 ntTSL 219.52■□□□□ 0.721e-10■■□□□ 14.5
NCBP2P52298 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.531e-10■■□□□ 14.5
NCBP2P52298 NFATC2IP-205ENST00000565919 576 ntTSL 413.26□□□□□ -0.291e-10■■□□□ 14.5
NCBP2P52298 NFATC2IP-203ENST00000564978 2350 ntTSL 1 (best) BASIC8.87□□□□□ -0.991e-10■■□□□ 14.5
NCBP2P52298 SEPT9-215ENST00000586521 601 ntTSL 416.39■□□□□ 0.212e-6■■□□□ 14.5
NCBP2P52298 PIGZ-201ENST00000238138 868 ntTSL 223.64■■□□□ 1.373e-6■■□□□ 14.5
NCBP2P52298 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.33e-6■■□□□ 14.5
NCBP2P52298 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.69□□□□□ -0.063e-6■■□□□ 14.5
NCBP2P52298 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.76■□□□□ 0.112e-6■■□□□ 14.5
NCBP2P52298 SEPT9-203ENST00000427177 3821 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.432e-6■■□□□ 14.5
NCBP2P52298 SEPT9-235ENST00000591020 582 ntTSL 410.33□□□□□ -0.762e-6■■□□□ 14.5
NCBP2P52298 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.718e-8■■□□□ 14.5
NCBP2P52298 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.94■□□□□ 0.468e-8■■□□□ 14.5
NCBP2P52298 PPIL2-205ENST00000446951 1926 ntTSL 1 (best)14.21□□□□□ -0.138e-8■■□□□ 14.5
Retrieved 100 of 18,329 protein–RNA pairs in 133 ms