Protein–RNA interactions for Protein: Q6W349

LINC00575, Putative uncharacterized protein encoded by LINC00575, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00575Q6W349 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
LINC00575Q6W349 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00575Q6W349 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00575Q6W349 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00575Q6W349 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00575Q6W349 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
LINC00575Q6W349 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC12.52□□□□□ -0.41
LINC00575Q6W349 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC12.52□□□□□ -0.41
LINC00575Q6W349 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00575Q6W349 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC12.52□□□□□ -0.41
LINC00575Q6W349 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00575Q6W349 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00575Q6W349 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00575Q6W349 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00575Q6W349 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00575Q6W349 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
LINC00575Q6W349 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00575Q6W349 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC12.52□□□□□ -0.41
LINC00575Q6W349 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC12.52□□□□□ -0.41
LINC00575Q6W349 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
LINC00575Q6W349 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00575Q6W349 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00575Q6W349 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00575Q6W349 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00575Q6W349 MFF-207ENST00000409565 1548 ntTSL 2 BASIC12.52□□□□□ -0.41
LINC00575Q6W349 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00575Q6W349 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00575Q6W349 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00575Q6W349 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00575Q6W349 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00575Q6W349 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00575Q6W349 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC12.51□□□□□ -0.41
LINC00575Q6W349 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00575Q6W349 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00575Q6W349 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC12.51□□□□□ -0.41
LINC00575Q6W349 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00575Q6W349 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
LINC00575Q6W349 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
LINC00575Q6W349 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
LINC00575Q6W349 PTPA-214ENST00000423100 988 ntTSL 2 BASIC12.51□□□□□ -0.41
LINC00575Q6W349 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC12.51□□□□□ -0.41
LINC00575Q6W349 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00575Q6W349 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
LINC00575Q6W349 SF1-220ENST00000626028 704 ntTSL 2 BASIC12.51□□□□□ -0.41
LINC00575Q6W349 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC12.51□□□□□ -0.41
LINC00575Q6W349 AC135050.7-201ENST00000624508 2218 ntBASIC12.51□□□□□ -0.41
LINC00575Q6W349 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
LINC00575Q6W349 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00575Q6W349 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC12.51□□□□□ -0.41
LINC00575Q6W349 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
LINC00575Q6W349 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
LINC00575Q6W349 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC12.51□□□□□ -0.41
LINC00575Q6W349 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
LINC00575Q6W349 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00575Q6W349 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00575Q6W349 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00575Q6W349 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00575Q6W349 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00575Q6W349 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
LINC00575Q6W349 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00575Q6W349 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00575Q6W349 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00575Q6W349 AC020916.1-201ENST00000587762 1774 ntBASIC12.51□□□□□ -0.41
LINC00575Q6W349 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00575Q6W349 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00575Q6W349 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00575Q6W349 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00575Q6W349 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC12.5□□□□□ -0.41
LINC00575Q6W349 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC12.5□□□□□ -0.41
LINC00575Q6W349 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00575Q6W349 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC12.5□□□□□ -0.41
LINC00575Q6W349 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00575Q6W349 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC12.5□□□□□ -0.41
LINC00575Q6W349 COMP-202ENST00000425807 2292 ntTSL 2 BASIC12.5□□□□□ -0.41
LINC00575Q6W349 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC12.5□□□□□ -0.41
LINC00575Q6W349 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
LINC00575Q6W349 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC12.5□□□□□ -0.41
LINC00575Q6W349 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC12.5□□□□□ -0.41
LINC00575Q6W349 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC12.5□□□□□ -0.41
LINC00575Q6W349 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00575Q6W349 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00575Q6W349 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00575Q6W349 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
LINC00575Q6W349 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00575Q6W349 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00575Q6W349 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC12.5□□□□□ -0.41
LINC00575Q6W349 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC12.5□□□□□ -0.41
LINC00575Q6W349 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
LINC00575Q6W349 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC12.5□□□□□ -0.41
LINC00575Q6W349 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00575Q6W349 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
LINC00575Q6W349 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00575Q6W349 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
LINC00575Q6W349 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00575Q6W349 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC12.5□□□□□ -0.41
LINC00575Q6W349 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC12.5□□□□□ -0.41
LINC00575Q6W349 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00575Q6W349 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
LINC00575Q6W349 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00575Q6W349 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms