RNA–Protein interactions for RNA: ENST00000264808.7

PRDM5-201, Transcript of PR/SET domain 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM5, Length 5,330 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM5-201ENST00000264808 NISCHQ9Y2I1 1504 aa32.98■■■□□ 2.87
PRDM5-201ENST00000264808 DCAF8L2P0C7V8 631 aa32.75■■■□□ 2.83
PRDM5-201ENST00000264808 SUPT5HO00267 1087 aaKnown RBP30.45■■■□□ 2.46
PRDM5-201ENST00000264808 SHROOM4Q9ULL8 1493 aa30.28■■■□□ 2.44
PRDM5-201ENST00000264808 FAM9AQ8IZU1 332 aaPredicted RBP29.38■■■□□ 2.29
PRDM5-201ENST00000264808 APLP2Q06481 763 aa29.08■■■□□ 2.25
PRDM5-201ENST00000264808 EHMT2Q96KQ7 1210 aa28.86■■■□□ 2.21
PRDM5-201ENST00000264808 TRIM41Q8WV44 630 aa28.57■■■□□ 2.16
PRDM5-201ENST00000264808 ABCC9O60706 1549 aa28.54■■■□□ 2.16
PRDM5-201ENST00000264808 UBTFP17480 764 aaKnown RBP28.15■■■□□ 2.1
PRDM5-201ENST00000264808 ATP1B4Q9UN42 357 aaPredicted RBP28.08■■■□□ 2.09
PRDM5-201ENST00000264808 RANGAP1P46060 587 aaPredicted RBP28.08■■■□□ 2.09
PRDM5-201ENST00000264808 PABPN1Q86U42 306 aaKnown RBP eCLIP27.94■■■□□ 2.06
PRDM5-201ENST00000264808 TTBK1Q5TCY1 1321 aaPredicted RBP27.8■■■□□ 2.04
PRDM5-201ENST00000264808 CCDC180Q9P1Z9 1646 aa27.71■■■□□ 2.03
PRDM5-201ENST00000264808 PCGF6Q9BYE7 350 aa27.49■■□□□ 1.99
PRDM5-201ENST00000264808 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.45■■□□□ 1.99
PRDM5-201ENST00000264808 HNRNPUL2Q1KMD3 747 aaKnown RBP27.45■■□□□ 1.99
PRDM5-201ENST00000264808 PELP1Q8IZL8 1130 aaKnown RBP27.45■■□□□ 1.99
PRDM5-201ENST00000264808 ZEB1P37275 1124 aaPredicted RBP27.45■■□□□ 1.99
PRDM5-201ENST00000264808 CCER1Q8TC90 406 aaPredicted RBP27.32■■□□□ 1.96
PRDM5-201ENST00000264808 MYT1LQ9UL68 1186 aa27.3■■□□□ 1.96
PRDM5-201ENST00000264808 ZCCHC6Q5VYS8 1495 aaKnown RBP27.3■■□□□ 1.96
PRDM5-201ENST00000264808 SCRIBQ14160 1630 aa27.2■■□□□ 1.95
PRDM5-201ENST00000264808 CHIC1Q5VXU3 224 aa27.19■■□□□ 1.94
PRDM5-201ENST00000264808 RB1CC1Q8TDY2 1594 aa27.17■■□□□ 1.94
PRDM5-201ENST00000264808 NACADO15069 1562 aa26.93■■□□□ 1.9
PRDM5-201ENST00000264808 TRIM26Q12899 539 aaPredicted RBP26.88■■□□□ 1.89
PRDM5-201ENST00000264808 FBLN2P98095 1184 aa26.86■■□□□ 1.89
PRDM5-201ENST00000264808 CENPBP07199 599 aaPredicted RBP26.84■■□□□ 1.89
PRDM5-201ENST00000264808 HRCP23327 699 aa26.84■■□□□ 1.89
PRDM5-201ENST00000264808 ITGAEP38570 1179 aa26.81■■□□□ 1.88
PRDM5-201ENST00000264808 PPARGC1BQ86YN6 1023 aaKnown RBP26.79■■□□□ 1.88
PRDM5-201ENST00000264808 LOC105371045A0A1W2PR82 267 aa26.72■■□□□ 1.87
PRDM5-201ENST00000264808 CSRNP3Q8WYN3 585 aa26.51■■□□□ 1.83
PRDM5-201ENST00000264808 FAM50AQ14320 339 aaKnown RBP26.5■■□□□ 1.83
PRDM5-201ENST00000264808 CDK11AQ9UQ88 783 aaPredicted RBP26.45■■□□□ 1.82
PRDM5-201ENST00000264808 DCAF1Q9Y4B6 1507 aa26.42■■□□□ 1.82
PRDM5-201ENST00000264808 MYT1Q01538 1121 aa26.35■■□□□ 1.81
PRDM5-201ENST00000264808 TRIM52Q96A61 297 aa26.32■■□□□ 1.8
PRDM5-201ENST00000264808 NPM1P06748 294 aaKnown RBP eCLIP26.32■■□□□ 1.8
PRDM5-201ENST00000264808 NEFLP07196 543 aa26.32■■□□□ 1.8
PRDM5-201ENST00000264808 POLR3GLQ9BT43 218 aa26.28■■□□□ 1.8
PRDM5-201ENST00000264808 BAZ1BQ9UIG0 1483 aaKnown RBP26.24■■□□□ 1.79
PRDM5-201ENST00000264808 P3H3Q8IVL6 736 aa26.17■■□□□ 1.78
PRDM5-201ENST00000264808 CHMP7Q8WUX9 453 aaPredicted RBP26.11■■□□□ 1.77
PRDM5-201ENST00000264808 BAZ1AQ9NRL2 1556 aaPredicted RBP26.09■■□□□ 1.77
PRDM5-201ENST00000264808 SLC4A1APQ9BWU0 796 aaKnown RBP26.08■■□□□ 1.77
PRDM5-201ENST00000264808 RSF1Q96T23 1441 aaPredicted RBP26.05■■□□□ 1.76
PRDM5-201ENST00000264808 ESF1Q9H501 851 aaKnown RBP26.03■■□□□ 1.76
PRDM5-201ENST00000264808 ARID3CA6NKF2 412 aa25.99■■□□□ 1.75
PRDM5-201ENST00000264808 ERCC6Q03468 1493 aa25.97■■□□□ 1.75
PRDM5-201ENST00000264808 ZNF777Q9ULD5 760 aaPredicted RBP25.96■■□□□ 1.75
PRDM5-201ENST00000264808 ERICH6Q7L0X2 663 aa25.9■■□□□ 1.74
PRDM5-201ENST00000264808 EEA1Q15075 1411 aa25.9■■□□□ 1.74
PRDM5-201ENST00000264808 MYO15BQ96JP2 1530 aa25.9■■□□□ 1.74
PRDM5-201ENST00000264808 YTHDC1Q96MU7 727 aaKnown RBP25.9■■□□□ 1.74
PRDM5-201ENST00000264808 NEUROD1Q13562 356 aa25.82■■□□□ 1.72
PRDM5-201ENST00000264808 BCANQ96GW7 911 aa25.8■■□□□ 1.72
PRDM5-201ENST00000264808 WRNQ14191 1432 aaPredicted RBP eCLIP25.79■■□□□ 1.72
PRDM5-201ENST00000264808 SMARCA2P51531 1590 aa25.74■■□□□ 1.71
PRDM5-201ENST00000264808 ZNF326Q5BKZ1 582 aaKnown RBP25.73■■□□□ 1.71
PRDM5-201ENST00000264808 KIF27Q86VH2 1401 aa25.73■■□□□ 1.71
PRDM5-201ENST00000264808 CNGB1Q14028 1251 aaPredicted RBP25.66■■□□□ 1.7
PRDM5-201ENST00000264808 STAG3Q9UJ98 1225 aa25.64■■□□□ 1.7
PRDM5-201ENST00000264808 MTUS2Q5JR59 1369 aa25.64■■□□□ 1.69
PRDM5-201ENST00000264808 TSPY4P0CV99 314 aa25.63■■□□□ 1.69
PRDM5-201ENST00000264808 TSPY10P0CW01 314 aa25.63■■□□□ 1.69
PRDM5-201ENST00000264808 PDS5BQ9NTI5 1447 aa25.6■■□□□ 1.69
PRDM5-201ENST00000264808 DIEXFQ68CQ4 756 aaKnown RBP25.59■■□□□ 1.69
PRDM5-201ENST00000264808 CECR2Q9BXF3 1484 aa25.58■■□□□ 1.69
PRDM5-201ENST00000264808 GOLGA3Q08378 1498 aa25.58■■□□□ 1.69
PRDM5-201ENST00000264808 PLEKHD1A6NEE1 506 aa25.56■■□□□ 1.68
PRDM5-201ENST00000264808 CLIP1P30622 1438 aa25.56■■□□□ 1.68
PRDM5-201ENST00000264808 ACIN1Q9UKV3 1341 aaKnown RBP25.55■■□□□ 1.68
PRDM5-201ENST00000264808 NEFMP07197 916 aa25.48■■□□□ 1.67
PRDM5-201ENST00000264808 CHGAP10645 457 aaKnown RBP25.45■■□□□ 1.66
PRDM5-201ENST00000264808 ANP32CO43423 234 aa25.44■■□□□ 1.66
PRDM5-201ENST00000264808 CEP164Q9UPV0 1460 aa25.44■■□□□ 1.66
PRDM5-201ENST00000264808 DAXXQ9UER7 740 aaPredicted RBP25.38■■□□□ 1.65
PRDM5-201ENST00000264808 TONSLQ96HA7 1378 aa25.36■■□□□ 1.65
PRDM5-201ENST00000264808 KCNH8Q96L42 1107 aa25.34■■□□□ 1.65
PRDM5-201ENST00000264808 MROH2BQ7Z745 1585 aa25.33■■□□□ 1.65
PRDM5-201ENST00000264808 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.31■■□□□ 1.64
PRDM5-201ENST00000264808 CHIC2Q9UKJ5 165 aa25.28■■□□□ 1.64
PRDM5-201ENST00000264808 CUX2O14529 1486 aa25.28■■□□□ 1.64
PRDM5-201ENST00000264808 PLPPR3Q6T4P5 718 aa25.26■■□□□ 1.63
PRDM5-201ENST00000264808 TNIKQ9UKE5 1360 aa25.25■■□□□ 1.63
PRDM5-201ENST00000264808 CCDC88BA6NC98 1476 aa25.24■■□□□ 1.63
PRDM5-201ENST00000264808 CARMIL1Q5VZK9 1371 aa25.24■■□□□ 1.63
PRDM5-201ENST00000264808 TOP2AP11388 1531 aaKnown RBP25.22■■□□□ 1.63
PRDM5-201ENST00000264808 CEP162Q5TB80 1403 aa25.21■■□□□ 1.63
PRDM5-201ENST00000264808 CADPSQ9ULU8 1353 aa25.21■■□□□ 1.63
PRDM5-201ENST00000264808 ZNF316A6NFI3 1004 aaPredicted RBP25.18■■□□□ 1.62
PRDM5-201ENST00000264808 CFDP1Q9UEE9 299 aaPredicted RBP25.18■■□□□ 1.62
PRDM5-201ENST00000264808 FHAD1B1AJZ9 1412 aa25.18■■□□□ 1.62
PRDM5-201ENST00000264808 CARMIL2Q6F5E8 1435 aa25.15■■□□□ 1.62
PRDM5-201ENST00000264808 ZBTB47Q9UFB7 747 aaPredicted RBP25.14■■□□□ 1.62
PRDM5-201ENST00000264808 SOGA1O94964 1423 aa25.14■■□□□ 1.62
PRDM5-201ENST00000264808 ATAD2BQ9ULI0 1458 aa25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms