Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC10.07□□□□□ -0.8
TOPBP1Q92547 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC10.07□□□□□ -0.8
TOPBP1Q92547 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC10.07□□□□□ -0.8
TOPBP1Q92547 IL1RAP-213ENST00000447382 4769 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
TOPBP1Q92547 APOL3-203ENST00000397287 3626 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
TOPBP1Q92547 CYP4Z2P-201ENST00000423332 1512 ntBASIC10.07□□□□□ -0.8
TOPBP1Q92547 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC10.07□□□□□ -0.8
TOPBP1Q92547 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC10.06□□□□□ -0.8
TOPBP1Q92547 ITPK1-AS1-201ENST00000553639 4701 ntBASIC10.06□□□□□ -0.8
TOPBP1Q92547 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC10.06□□□□□ -0.8
TOPBP1Q92547 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
TOPBP1Q92547 CASC19-248ENST00000641674 1356 ntBASIC10.06□□□□□ -0.8
TOPBP1Q92547 KLHL3-209ENST00000508657 6981 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
TOPBP1Q92547 AP001541.1-201ENST00000623322 1904 ntBASIC10.06□□□□□ -0.8
TOPBP1Q92547 NEDD9-208ENST00000504387 3211 ntAPPRIS ALT2 TSL 2 BASIC10.06□□□□□ -0.8
TOPBP1Q92547 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
TOPBP1Q92547 MRPS23-201ENST00000313608 5621 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
TOPBP1Q92547 QTRT2-212ENST00000485050 3844 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
TOPBP1Q92547 RUNDC3A-AS1-202ENST00000588097 5203 ntTSL 5 BASIC10.06□□□□□ -0.8
TOPBP1Q92547 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC10.06□□□□□ -0.8
TOPBP1Q92547 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC10.06□□□□□ -0.8
TOPBP1Q92547 RN7SL172P-201ENST00000460535 303 ntBASIC10.06□□□□□ -0.8
TOPBP1Q92547 RN7SL30P-201ENST00000488416 306 ntBASIC10.06□□□□□ -0.8
TOPBP1Q92547 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC10.06□□□□□ -0.8
TOPBP1Q92547 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC10.06□□□□□ -0.8
TOPBP1Q92547 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
TOPBP1Q92547 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC10.06□□□□□ -0.8
TOPBP1Q92547 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC10.06□□□□□ -0.8
TOPBP1Q92547 AC136428.4-201ENST00000634254 1155 ntBASIC10.06□□□□□ -0.8
TOPBP1Q92547 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC10.06□□□□□ -0.8
TOPBP1Q92547 ADAM22-205ENST00000398209 9144 ntAPPRIS P4 TSL 1 (best) BASIC10.06□□□□□ -0.8
TOPBP1Q92547 TRPM3-204ENST00000360823 5966 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
TOPBP1Q92547 SH3PXD2A-202ENST00000355946 11245 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
TOPBP1Q92547 CXCR2-201ENST00000318507 2879 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
TOPBP1Q92547 XIST-206ENST00000434839 2865 ntTSL 5 BASIC10.06□□□□□ -0.8
TOPBP1Q92547 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
TOPBP1Q92547 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
TOPBP1Q92547 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
TOPBP1Q92547 ZFP2-202ENST00000520301 2043 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
TOPBP1Q92547 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
TOPBP1Q92547 SGMS2-202ENST00000394684 6149 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
TOPBP1Q92547 PARP4P2-201ENST00000446672 3326 ntBASIC10.05□□□□□ -0.8
TOPBP1Q92547 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
TOPBP1Q92547 AC023421.1-201ENST00000590535 1785 ntBASIC10.05□□□□□ -0.8
TOPBP1Q92547 CD46-209ENST00000367047 3089 ntTSL 5 BASIC10.05□□□□□ -0.8
TOPBP1Q92547 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
TOPBP1Q92547 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
TOPBP1Q92547 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC10.05□□□□□ -0.8
TOPBP1Q92547 DHFR2-202ENST00000394221 4038 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
TOPBP1Q92547 AC062029.1-202ENST00000606164 3651 ntBASIC10.05□□□□□ -0.8
TOPBP1Q92547 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
TOPBP1Q92547 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
TOPBP1Q92547 OR10R3P-201ENST00000361688 942 ntBASIC10.05□□□□□ -0.8
TOPBP1Q92547 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC10.05□□□□□ -0.8
TOPBP1Q92547 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC10.05□□□□□ -0.8
TOPBP1Q92547 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC10.05□□□□□ -0.8
TOPBP1Q92547 RPS27AP3-201ENST00000453803 454 ntBASIC10.05□□□□□ -0.8
TOPBP1Q92547 LDHC-203ENST00000535809 757 ntTSL 5 BASIC10.05□□□□□ -0.8
TOPBP1Q92547 LDHC-205ENST00000537486 583 ntTSL 5 BASIC10.05□□□□□ -0.8
TOPBP1Q92547 RN7SL708P-201ENST00000580952 299 ntBASIC10.05□□□□□ -0.8
TOPBP1Q92547 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC10.05□□□□□ -0.8
TOPBP1Q92547 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC10.05□□□□□ -0.8
TOPBP1Q92547 SUGT1P3-202ENST00000604259 383 ntBASIC10.05□□□□□ -0.8
TOPBP1Q92547 OR11H2-202ENST00000641517 1085 ntBASIC10.05□□□□□ -0.8
TOPBP1Q92547 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC10.05□□□□□ -0.8
TOPBP1Q92547 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
TOPBP1Q92547 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
TOPBP1Q92547 NEK1-208ENST00000512193 4430 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
TOPBP1Q92547 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
TOPBP1Q92547 ABCD3-202ENST00000370214 3538 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
TOPBP1Q92547 CTNND1-222ENST00000529919 4780 ntTSL 5 BASIC10.05□□□□□ -0.8
TOPBP1Q92547 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC10.05□□□□□ -0.8
TOPBP1Q92547 LRP1-201ENST00000243077 14897 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
TOPBP1Q92547 AC007842.1-201ENST00000597336 2039 ntBASIC10.04□□□□□ -0.8
TOPBP1Q92547 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC10.04□□□□□ -0.8
TOPBP1Q92547 USP47-203ENST00000399455 7396 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
TOPBP1Q92547 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC10.04□□□□□ -0.8
TOPBP1Q92547 AC112719.2-201ENST00000501239 1685 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
TOPBP1Q92547 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC10.04□□□□□ -0.8
TOPBP1Q92547 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC10.04□□□□□ -0.8
TOPBP1Q92547 METTL15P3-201ENST00000415522 1221 ntBASIC10.04□□□□□ -0.8
TOPBP1Q92547 OR7E116P-201ENST00000448529 957 ntBASIC10.04□□□□□ -0.8
TOPBP1Q92547 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC10.04□□□□□ -0.8
TOPBP1Q92547 RNA5SP400-201ENST00000517155 111 ntBASIC10.04□□□□□ -0.8
TOPBP1Q92547 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC10.04□□□□□ -0.8
TOPBP1Q92547 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC10.04□□□□□ -0.8
TOPBP1Q92547 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC10.04□□□□□ -0.8
TOPBP1Q92547 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC10.04□□□□□ -0.8
TOPBP1Q92547 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC10.04□□□□□ -0.8
TOPBP1Q92547 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
TOPBP1Q92547 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
TOPBP1Q92547 RUNX1T1-248ENST00000613302 7687 ntAPPRIS P3 TSL 5 BASIC10.04□□□□□ -0.8
TOPBP1Q92547 ZBTB40-201ENST00000374651 8368 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
TOPBP1Q92547 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
TOPBP1Q92547 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
TOPBP1Q92547 ABCA4-201ENST00000370225 7309 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
TOPBP1Q92547 AL355377.1-201ENST00000621125 1653 ntBASIC10.04□□□□□ -0.8
TOPBP1Q92547 NLGN4X-204ENST00000381095 5870 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
TOPBP1Q92547 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
TOPBP1Q92547 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms