RNA–Protein interactions for RNA: ENST00000604485.1

LINC01050-201, Transcript of long intergenic non-protein coding RNA 1050, humanhuman

TSL 3 BASIC

Gene LINC01050, Length 760 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01050-201ENST00000604485 AEBP2Q6ZN18 517 aaPredicted RBP25.07■■□□□ 1.6
LINC01050-201ENST00000604485 CHIC1Q5VXU3 224 aa23.39■■□□□ 1.33
LINC01050-201ENST00000604485 SENP3Q9H4L4 574 aaPredicted RBP21.49■■□□□ 1.03
LINC01050-201ENST00000604485 PHF23Q9BUL5 403 aaPredicted RBP21.1■□□□□ 0.97
LINC01050-201ENST00000604485 FOXD1Q16676 465 aa20.13■□□□□ 0.81
LINC01050-201ENST00000604485 POTEDQ86YR6 584 aa20.05■□□□□ 0.8
LINC01050-201ENST00000604485 MSH5O43196 834 aa19.14■□□□□ 0.65
LINC01050-201ENST00000604485 PIAS4Q8N2W9 510 aaPredicted RBP18.62■□□□□ 0.57
LINC01050-201ENST00000604485 PPP6R1Q9UPN7 881 aa18.22■□□□□ 0.51
LINC01050-201ENST00000604485 ADRA2BP18089 450 aa18.11■□□□□ 0.49
LINC01050-201ENST00000604485 PLPPR3Q6T4P5 718 aa18.04■□□□□ 0.48
LINC01050-201ENST00000604485 DMRT2Q9Y5R5 561 aa16.92■□□□□ 0.3
LINC01050-201ENST00000604485 CACNB1Q02641 598 aaPredicted RBP16.91■□□□□ 0.3
LINC01050-201ENST00000604485 MAPK8IP2Q13387 824 aaPredicted RBP16.88■□□□□ 0.29
LINC01050-201ENST00000604485 SCAF1Q9H7N4 1312 aaKnown RBP16.56■□□□□ 0.24
LINC01050-201ENST00000604485 RNF39Q9H2S5 420 aa16.27■□□□□ 0.2
LINC01050-201ENST00000604485 DCAF8L1A6NGE4 600 aa16.26■□□□□ 0.19
LINC01050-201ENST00000604485 HOXD11P31277 338 aaPredicted RBP15.99■□□□□ 0.15
LINC01050-201ENST00000604485 C1QBPQ07021 282 aaKnown RBP15.98■□□□□ 0.15
LINC01050-201ENST00000604485 KCNA4P22459 653 aa15.89■□□□□ 0.13
LINC01050-201ENST00000604485 PPP4R3CPQ6ZMV5 832 aa15.83■□□□□ 0.12
LINC01050-201ENST00000604485 RNF216Q9NWF9 866 aaPredicted RBP15.65■□□□□ 0.1
LINC01050-201ENST00000604485 CNKSR2Q8WXI2 1034 aa15.6■□□□□ 0.09
LINC01050-201ENST00000604485 DNAJC5BQ9UF47 199 aa15.6■□□□□ 0.09
LINC01050-201ENST00000604485 POTEHQ6S545 545 aa15.55■□□□□ 0.08
LINC01050-201ENST00000604485 NCBP3Q53F19 620 aaKnown RBP15.48■□□□□ 0.07
LINC01050-201ENST00000604485 NPM3O75607 178 aaKnown RBP15.32■□□□□ 0.04
LINC01050-201ENST00000604485 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.23■□□□□ 0.03
LINC01050-201ENST00000604485 SLC4A1APQ9BWU0 796 aaKnown RBP15.16■□□□□ 0.02
LINC01050-201ENST00000604485 EHMT2Q96KQ7 1210 aa15.08■□□□□ 0
LINC01050-201ENST00000604485 DSG3P32926 999 aa14.97□□□□□ -0.01
LINC01050-201ENST00000604485 CSRNP3Q8WYN3 585 aa14.87□□□□□ -0.03
LINC01050-201ENST00000604485 CAPN15O75808 1086 aa14.86□□□□□ -0.03
LINC01050-201ENST00000604485 SPINK5Q9NQ38 1064 aaPredicted RBP14.86□□□□□ -0.03
LINC01050-201ENST00000604485 U3KPZ7 1027 aaPredicted RBP14.83□□□□□ -0.04
LINC01050-201ENST00000604485 ZBTB22O15209 634 aa14.68□□□□□ -0.06
LINC01050-201ENST00000604485 FOXD4L1Q9NU39 408 aa14.52□□□□□ -0.09
LINC01050-201ENST00000604485 ABCB7O75027 752 aa14.46□□□□□ -0.09
LINC01050-201ENST00000604485 TRHP20396 242 aaPredicted RBP14.43□□□□□ -0.1
LINC01050-201ENST00000604485 SLC4A2P04920 1241 aa14.42□□□□□ -0.1
LINC01050-201ENST00000604485 ZNF219Q9P2Y4 722 aaPredicted RBP14.37□□□□□ -0.11
LINC01050-201ENST00000604485 APLP2Q06481 763 aa14.32□□□□□ -0.12
LINC01050-201ENST00000604485 CHRDL2Q6WN34 429 aa14.3□□□□□ -0.12
LINC01050-201ENST00000604485 RBM42Q9BTD8 480 aaKnown RBP14.29□□□□□ -0.12
LINC01050-201ENST00000604485 SP7Q8TDD2 431 aaPredicted RBP14.21□□□□□ -0.13
LINC01050-201ENST00000604485 MYCNP04198 464 aaPredicted RBP14.13□□□□□ -0.15
LINC01050-201ENST00000604485 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.11□□□□□ -0.15
LINC01050-201ENST00000604485 HNRNPUL2Q1KMD3 747 aaKnown RBP14.11□□□□□ -0.15
LINC01050-201ENST00000604485 ATXN8OSP0DMR3 200 aa14.02□□□□□ -0.17
LINC01050-201ENST00000604485 NISCHQ9Y2I1 1504 aa14□□□□□ -0.17
LINC01050-201ENST00000604485 SAMD1Q6SPF0 538 aaPredicted RBP14□□□□□ -0.17
LINC01050-201ENST00000604485 POLA2Q14181 598 aa13.86□□□□□ -0.19
LINC01050-201ENST00000604485 AKT1S1Q96B36 256 aa13.8□□□□□ -0.2
LINC01050-201ENST00000604485 PIP4P2Q8N4L2 257 aa13.79□□□□□ -0.2
LINC01050-201ENST00000604485 HAX1O00165 279 aa13.75□□□□□ -0.21
LINC01050-201ENST00000604485 ATF5Q9Y2D1 282 aaPredicted RBP13.75□□□□□ -0.21
LINC01050-201ENST00000604485 REM2Q8IYK8 340 aaPredicted RBP13.67□□□□□ -0.22
LINC01050-201ENST00000604485 FXR2P51116 673 aaKnown RBP eCLIP13.58□□□□□ -0.24
LINC01050-201ENST00000604485 PITPNM1O00562 1244 aa13.54□□□□□ -0.24
LINC01050-201ENST00000604485 EVX2Q03828 476 aa13.54□□□□□ -0.24
LINC01050-201ENST00000604485 ZBTB12Q9Y330 459 aaPredicted RBP13.51□□□□□ -0.25
LINC01050-201ENST00000604485 OSCARQ8IYS5 282 aa13.46□□□□□ -0.25
LINC01050-201ENST00000604485 FKBP8Q14318 412 aa13.33□□□□□ -0.28
LINC01050-201ENST00000604485 LHX8Q68G74 356 aa13.31□□□□□ -0.28
LINC01050-201ENST00000604485 MKRN4PQ13434 485 aaPredicted RBP13.2□□□□□ -0.3
LINC01050-201ENST00000604485 C19orf67A6NJJ6 358 aa13.18□□□□□ -0.3
LINC01050-201ENST00000604485 GABBR2O75899 941 aa13.18□□□□□ -0.3
LINC01050-201ENST00000604485 PRKAR2AP13861 404 aaKnown RBP13.18□□□□□ -0.3
LINC01050-201ENST00000604485 PLSCR2Q9NRY7 297 aa13.13□□□□□ -0.31
LINC01050-201ENST00000604485 FBLN2P98095 1184 aa13.06□□□□□ -0.32
LINC01050-201ENST00000604485 SPDYE2BA6NHP3 402 aa13.03□□□□□ -0.32
LINC01050-201ENST00000604485 SPDYE6P0CI01 402 aa13.03□□□□□ -0.32
LINC01050-201ENST00000604485 SPDYE2Q495Y8 402 aa13.03□□□□□ -0.32
LINC01050-201ENST00000604485 CLEC11AQ9Y240 323 aa13.03□□□□□ -0.32
LINC01050-201ENST00000604485 SPDYE4A6NLX3 237 aa13□□□□□ -0.33
LINC01050-201ENST00000604485 SPDYE1Q8NFV5 336 aaPredicted RBP13□□□□□ -0.33
LINC01050-201ENST00000604485 PROM2Q8N271 834 aa12.99□□□□□ -0.33
LINC01050-201ENST00000604485 POTEIP0CG38 1075 aa12.9□□□□□ -0.34
LINC01050-201ENST00000604485 CHADLQ6NUI6 762 aa12.87□□□□□ -0.35
LINC01050-201ENST00000604485 AMER1Q5JTC6 1135 aaPredicted RBP12.81□□□□□ -0.36
LINC01050-201ENST00000604485 RTN4Q9NQC3 1192 aaKnown RBP12.8□□□□□ -0.36
LINC01050-201ENST00000604485 SSUH2Q9Y2M2 353 aa12.78□□□□□ -0.36
LINC01050-201ENST00000604485 FBXO3Q9UK99 471 aa12.76□□□□□ -0.37
LINC01050-201ENST00000604485 ZNF692Q9BU19 519 aaPredicted RBP12.75□□□□□ -0.37
LINC01050-201ENST00000604485 CD44P16070 742 aaKnown RBP12.72□□□□□ -0.37
LINC01050-201ENST00000604485 PRR29P0C7W0 189 aa12.7□□□□□ -0.38
LINC01050-201ENST00000604485 CLCN6P51797 869 aa12.69□□□□□ -0.38
LINC01050-201ENST00000604485 DCBLD2Q96PD2 775 aa12.65□□□□□ -0.38
LINC01050-201ENST00000604485 VASPP50552 380 aaPredicted RBP12.62□□□□□ -0.39
LINC01050-201ENST00000604485 FARP1Q9Y4F1 1045 aaPredicted RBP12.59□□□□□ -0.39
LINC01050-201ENST00000604485 POTEMA6NI47 508 aa12.58□□□□□ -0.4
LINC01050-201ENST00000604485 OTUD5Q96G74 571 aa12.57□□□□□ -0.4
LINC01050-201ENST00000604485 PABPN1Q86U42 306 aaKnown RBP eCLIP12.54□□□□□ -0.4
LINC01050-201ENST00000604485 POTEGQ6S5H5 508 aa12.52□□□□□ -0.41
LINC01050-201ENST00000604485 IFNLR1Q8IU57 520 aaPredicted RBP12.49□□□□□ -0.41
LINC01050-201ENST00000604485 ZNF579Q8NAF0 562 aaKnown RBP12.48□□□□□ -0.41
LINC01050-201ENST00000604485 POTEB2H3BUK9 544 aa12.46□□□□□ -0.41
LINC01050-201ENST00000604485 STAG3Q9UJ98 1225 aa12.45□□□□□ -0.42
LINC01050-201ENST00000604485 CCDC180Q9P1Z9 1646 aa12.44□□□□□ -0.42
LINC01050-201ENST00000604485 ZRANB1Q9UGI0 708 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 137.2 ms