RNA–Protein interactions for RNA: ENST00000378673.2

GDF9-202, Transcript of growth differentiation factor 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene GDF9, Length 2,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDF9-202ENST00000378673 CHIC1Q5VXU3 224 aa15.28■□□□□ 0.04
GDF9-202ENST00000378673 AEBP2Q6ZN18 517 aaPredicted RBP14.67□□□□□ -0.06
GDF9-202ENST00000378673 NISCHQ9Y2I1 1504 aa13.73□□□□□ -0.21
GDF9-202ENST00000378673 PHF23Q9BUL5 403 aaPredicted RBP13.62□□□□□ -0.23
GDF9-202ENST00000378673 SLC24A1O60721 1099 aa12.97□□□□□ -0.33
GDF9-202ENST00000378673 EHMT2Q96KQ7 1210 aa12.96□□□□□ -0.33
GDF9-202ENST00000378673 PLPPR3Q6T4P5 718 aa12.86□□□□□ -0.35
GDF9-202ENST00000378673 MYT1Q01538 1121 aa12.65□□□□□ -0.38
GDF9-202ENST00000378673 PELP1Q8IZL8 1130 aaKnown RBP12.64□□□□□ -0.39
GDF9-202ENST00000378673 KCNA4P22459 653 aa12.47□□□□□ -0.41
GDF9-202ENST00000378673 TTBK1Q5TCY1 1321 aaPredicted RBP12.42□□□□□ -0.42
GDF9-202ENST00000378673 PRKCSHP14314 528 aaPredicted RBP12.37□□□□□ -0.43
GDF9-202ENST00000378673 CSRNP3Q8WYN3 585 aa12.29□□□□□ -0.44
GDF9-202ENST00000378673 SENP3Q9H4L4 574 aaPredicted RBP12.19□□□□□ -0.46
GDF9-202ENST00000378673 APLP2Q06481 763 aa12.18□□□□□ -0.46
GDF9-202ENST00000378673 CCDC180Q9P1Z9 1646 aa12.17□□□□□ -0.46
GDF9-202ENST00000378673 ABCC9O60706 1549 aa12.15□□□□□ -0.46
GDF9-202ENST00000378673 ADRA2BP18089 450 aa12.1□□□□□ -0.47
GDF9-202ENST00000378673 DAXXQ9UER7 740 aaPredicted RBP12.1□□□□□ -0.47
GDF9-202ENST00000378673 ERICH6Q7L0X2 663 aa12.04□□□□□ -0.48
GDF9-202ENST00000378673 SLC4A1APQ9BWU0 796 aaKnown RBP12.03□□□□□ -0.48
GDF9-202ENST00000378673 RTN4Q9NQC3 1192 aaKnown RBP11.97□□□□□ -0.49
GDF9-202ENST00000378673 AMER1Q5JTC6 1135 aaPredicted RBP11.86□□□□□ -0.51
GDF9-202ENST00000378673 DCAF8L2P0C7V8 631 aa11.74□□□□□ -0.53
GDF9-202ENST00000378673 PPP6R1Q9UPN7 881 aa11.69□□□□□ -0.54
GDF9-202ENST00000378673 ZCCHC6Q5VYS8 1495 aaKnown RBP11.63□□□□□ -0.55
GDF9-202ENST00000378673 SHROOM4Q9ULL8 1493 aa11.63□□□□□ -0.55
GDF9-202ENST00000378673 ZBTB22O15209 634 aa11.53□□□□□ -0.56
GDF9-202ENST00000378673 RB1CC1Q8TDY2 1594 aa11.52□□□□□ -0.56
GDF9-202ENST00000378673 SUPT5HO00267 1087 aaKnown RBP11.52□□□□□ -0.57
GDF9-202ENST00000378673 HRCP23327 699 aa11.51□□□□□ -0.57
GDF9-202ENST00000378673 BCL11AQ9H165 835 aa11.51□□□□□ -0.57
GDF9-202ENST00000378673 PPP4R3CPQ6ZMV5 832 aa11.49□□□□□ -0.57
GDF9-202ENST00000378673 NCBP3Q53F19 620 aaKnown RBP11.49□□□□□ -0.57
GDF9-202ENST00000378673 NACADO15069 1562 aa11.46□□□□□ -0.58
GDF9-202ENST00000378673 EIF5BO60841 1220 aaKnown RBP11.44□□□□□ -0.58
GDF9-202ENST00000378673 MYO15BQ96JP2 1530 aa11.44□□□□□ -0.58
GDF9-202ENST00000378673 PABPN1Q86U42 306 aaKnown RBP eCLIP11.39□□□□□ -0.59
GDF9-202ENST00000378673 NPM3O75607 178 aaKnown RBP11.35□□□□□ -0.59
GDF9-202ENST00000378673 FAM9AQ8IZU1 332 aaPredicted RBP11.34□□□□□ -0.59
GDF9-202ENST00000378673 UNC13AQ9UPW8 1703 aa11.33□□□□□ -0.6
GDF9-202ENST00000378673 DCAF1Q9Y4B6 1507 aa11.32□□□□□ -0.6
GDF9-202ENST00000378673 SCRIBQ14160 1630 aa11.27□□□□□ -0.6
GDF9-202ENST00000378673 FOXD1Q16676 465 aa11.24□□□□□ -0.61
GDF9-202ENST00000378673 PCGF6Q9BYE7 350 aa11.24□□□□□ -0.61
GDF9-202ENST00000378673 PLEKHG5O94827 1062 aa11.23□□□□□ -0.61
GDF9-202ENST00000378673 DNAJC5BQ9UF47 199 aa11.22□□□□□ -0.61
GDF9-202ENST00000378673 BICRAQ9NZM4 1560 aa11.21□□□□□ -0.62
GDF9-202ENST00000378673 ARXQ96QS3 562 aa11.15□□□□□ -0.62
GDF9-202ENST00000378673 FOXD4L1Q9NU39 408 aa11.11□□□□□ -0.63
GDF9-202ENST00000378673 PPARGC1BQ86YN6 1023 aaKnown RBP11.1□□□□□ -0.63
GDF9-202ENST00000378673 TIMELESSQ9UNS1 1208 aa11.08□□□□□ -0.64
GDF9-202ENST00000378673 TRIM26Q12899 539 aaPredicted RBP11.07□□□□□ -0.64
GDF9-202ENST00000378673 KLHL34Q8N239 644 aa11.07□□□□□ -0.64
GDF9-202ENST00000378673 FKBP8Q14318 412 aa11.04□□□□□ -0.64
GDF9-202ENST00000378673 LOC105371045A0A1W2PR82 267 aa11□□□□□ -0.65
GDF9-202ENST00000378673 ZEB1P37275 1124 aaPredicted RBP11□□□□□ -0.65
GDF9-202ENST00000378673 RANGAP1P46060 587 aaPredicted RBP10.99□□□□□ -0.65
GDF9-202ENST00000378673 EIF4G1Q04637 1599 aaKnown RBP10.93□□□□□ -0.66
GDF9-202ENST00000378673 CC2D2AQ9P2K1 1620 aa10.93□□□□□ -0.66
GDF9-202ENST00000378673 PLCB2Q00722 1185 aa10.91□□□□□ -0.66
GDF9-202ENST00000378673 CNKSR2Q8WXI2 1034 aa10.9□□□□□ -0.66
GDF9-202ENST00000378673 PODXL2Q9NZ53 605 aa10.9□□□□□ -0.66
GDF9-202ENST00000378673 SCAF1Q9H7N4 1312 aaKnown RBP10.89□□□□□ -0.67
GDF9-202ENST00000378673 BCANQ96GW7 911 aa10.88□□□□□ -0.67
GDF9-202ENST00000378673 RSF1Q96T23 1441 aaPredicted RBP10.87□□□□□ -0.67
GDF9-202ENST00000378673 CECR2Q9BXF3 1484 aa10.87□□□□□ -0.67
GDF9-202ENST00000378673 TAOK2Q9UL54 1235 aa10.87□□□□□ -0.67
GDF9-202ENST00000378673 PIAS4Q8N2W9 510 aaPredicted RBP10.85□□□□□ -0.67
GDF9-202ENST00000378673 TULP1O00294 542 aaPredicted RBP10.85□□□□□ -0.67
GDF9-202ENST00000378673 UBE2Q2Q8WVN8 375 aa10.81□□□□□ -0.68
GDF9-202ENST00000378673 TRIM41Q8WV44 630 aa10.78□□□□□ -0.68
GDF9-202ENST00000378673 HAP1P54257 671 aaPredicted RBP10.77□□□□□ -0.68
GDF9-202ENST00000378673 HOMEZQ8IX15 550 aa10.76□□□□□ -0.69
GDF9-202ENST00000378673 CENPBP07199 599 aaPredicted RBP10.7□□□□□ -0.7
GDF9-202ENST00000378673 SMARCA4P51532 1647 aa10.69□□□□□ -0.7
GDF9-202ENST00000378673 TPRNQ4KMQ1 711 aa10.68□□□□□ -0.7
GDF9-202ENST00000378673 MROH2BQ7Z745 1585 aa10.64□□□□□ -0.71
GDF9-202ENST00000378673 BAZ1AQ9NRL2 1556 aaPredicted RBP10.64□□□□□ -0.71
GDF9-202ENST00000378673 ATAD2BQ9ULI0 1458 aa10.63□□□□□ -0.71
GDF9-202ENST00000378673 PDIA4P13667 645 aaKnown RBP10.62□□□□□ -0.71
GDF9-202ENST00000378673 VSIG10Q8N0Z9 540 aa10.59□□□□□ -0.71
GDF9-202ENST00000378673 PKNOX2Q96KN3 472 aa10.59□□□□□ -0.71
GDF9-202ENST00000378673 ATXN8OSP0DMR3 200 aa10.59□□□□□ -0.71
GDF9-202ENST00000378673 SMARCA2P51531 1590 aa10.58□□□□□ -0.71
GDF9-202ENST00000378673 NCAPD3P42695 1498 aa10.58□□□□□ -0.72
GDF9-202ENST00000378673 BAZ1BQ9UIG0 1483 aaKnown RBP10.58□□□□□ -0.72
GDF9-202ENST00000378673 ACIN1Q9UKV3 1341 aaKnown RBP10.57□□□□□ -0.72
GDF9-202ENST00000378673 ANO8Q9HCE9 1232 aaPredicted RBP10.56□□□□□ -0.72
GDF9-202ENST00000378673 WRNQ14191 1432 aaPredicted RBP eCLIP10.56□□□□□ -0.72
GDF9-202ENST00000378673 WIZO95785 1651 aa10.55□□□□□ -0.72
GDF9-202ENST00000378673 HMGXB3Q12766 1538 aa10.52□□□□□ -0.73
GDF9-202ENST00000378673 PDE4CQ08493 712 aa10.51□□□□□ -0.73
GDF9-202ENST00000378673 NPM2Q86SE8 214 aaKnown RBP10.51□□□□□ -0.73
GDF9-202ENST00000378673 NESP48681 1621 aa10.5□□□□□ -0.73
GDF9-202ENST00000378673 CCER1Q8TC90 406 aaPredicted RBP10.5□□□□□ -0.73
GDF9-202ENST00000378673 PEG3Q9GZU2 1588 aa10.49□□□□□ -0.73
GDF9-202ENST00000378673 NEUROD1Q13562 356 aa10.48□□□□□ -0.73
GDF9-202ENST00000378673 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.48□□□□□ -0.73
GDF9-202ENST00000378673 SLC4A2P04920 1241 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms