RNA–Protein interactions for RNA: ENST00000613302.4

RUNX1T1-248, Transcript of RUNX1 translocation partner 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene RUNX1T1, Length 7,687 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1T1-248ENST00000613302 DCAF8L2P0C7V8 631 aa16.66■□□□□ 0.26
RUNX1T1-248ENST00000613302 EHMT2Q96KQ7 1210 aa15.47■□□□□ 0.07
RUNX1T1-248ENST00000613302 SUPT5HO00267 1087 aaKnown RBP14.97□□□□□ -0.01
RUNX1T1-248ENST00000613302 TTBK1Q5TCY1 1321 aaPredicted RBP14.79□□□□□ -0.04
RUNX1T1-248ENST00000613302 SHROOM4Q9ULL8 1493 aa14.77□□□□□ -0.05
RUNX1T1-248ENST00000613302 RANGAP1P46060 587 aaPredicted RBP14.76□□□□□ -0.05
RUNX1T1-248ENST00000613302 ATP1B4Q9UN42 357 aaPredicted RBP14.63□□□□□ -0.07
RUNX1T1-248ENST00000613302 FAM9AQ8IZU1 332 aaPredicted RBP14.53□□□□□ -0.08
RUNX1T1-248ENST00000613302 CHIC1Q5VXU3 224 aa14.48□□□□□ -0.09
RUNX1T1-248ENST00000613302 APLP2Q06481 763 aa14.45□□□□□ -0.1
RUNX1T1-248ENST00000613302 MYT1LQ9UL68 1186 aa14.39□□□□□ -0.11
RUNX1T1-248ENST00000613302 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.03□□□□□ -0.16
RUNX1T1-248ENST00000613302 HNRNPUL2Q1KMD3 747 aaKnown RBP14.03□□□□□ -0.16
RUNX1T1-248ENST00000613302 CNGB1Q14028 1251 aaPredicted RBP14.02□□□□□ -0.17
RUNX1T1-248ENST00000613302 PELP1Q8IZL8 1130 aaKnown RBP13.98□□□□□ -0.17
RUNX1T1-248ENST00000613302 POLR3GLQ9BT43 218 aa13.96□□□□□ -0.17
RUNX1T1-248ENST00000613302 SLC4A1APQ9BWU0 796 aaKnown RBP13.96□□□□□ -0.17
RUNX1T1-248ENST00000613302 PCGF6Q9BYE7 350 aa13.93□□□□□ -0.18
RUNX1T1-248ENST00000613302 ERICH6Q7L0X2 663 aa13.86□□□□□ -0.19
RUNX1T1-248ENST00000613302 PLPPR3Q6T4P5 718 aa13.85□□□□□ -0.19
RUNX1T1-248ENST00000613302 UBTFP17480 764 aaKnown RBP13.81□□□□□ -0.2
RUNX1T1-248ENST00000613302 PPARGC1BQ86YN6 1023 aaKnown RBP13.79□□□□□ -0.2
RUNX1T1-248ENST00000613302 ITGAEP38570 1179 aa13.75□□□□□ -0.21
RUNX1T1-248ENST00000613302 SLC24A1O60721 1099 aa13.68□□□□□ -0.22
RUNX1T1-248ENST00000613302 YTHDC1Q96MU7 727 aaKnown RBP13.65□□□□□ -0.23
RUNX1T1-248ENST00000613302 MYT1Q01538 1121 aa13.62□□□□□ -0.23
RUNX1T1-248ENST00000613302 BCL11AQ9H165 835 aa13.62□□□□□ -0.23
RUNX1T1-248ENST00000613302 CCER1Q8TC90 406 aaPredicted RBP13.6□□□□□ -0.23
RUNX1T1-248ENST00000613302 BCANQ96GW7 911 aa13.6□□□□□ -0.23
RUNX1T1-248ENST00000613302 TRIM41Q8WV44 630 aa13.57□□□□□ -0.24
RUNX1T1-248ENST00000613302 FBLN2P98095 1184 aa13.52□□□□□ -0.24
RUNX1T1-248ENST00000613302 NISCHQ9Y2I1 1504 aa13.51□□□□□ -0.25
RUNX1T1-248ENST00000613302 NEFLP07196 543 aa13.38□□□□□ -0.27
RUNX1T1-248ENST00000613302 A0A0G2JS52 829 aa13.35□□□□□ -0.27
RUNX1T1-248ENST00000613302 PLEKHG5O94827 1062 aa13.35□□□□□ -0.27
RUNX1T1-248ENST00000613302 DAXXQ9UER7 740 aaPredicted RBP13.34□□□□□ -0.27
RUNX1T1-248ENST00000613302 ARID3CA6NKF2 412 aa13.31□□□□□ -0.28
RUNX1T1-248ENST00000613302 SCAF1Q9H7N4 1312 aaKnown RBP13.28□□□□□ -0.28
RUNX1T1-248ENST00000613302 SENP3Q9H4L4 574 aaPredicted RBP13.27□□□□□ -0.29
RUNX1T1-248ENST00000613302 PABPN1Q86U42 306 aaKnown RBP eCLIP13.26□□□□□ -0.29
RUNX1T1-248ENST00000613302 CLSPNQ9HAW4 1339 aa13.23□□□□□ -0.29
RUNX1T1-248ENST00000613302 ZNF326Q5BKZ1 582 aaKnown RBP13.22□□□□□ -0.29
RUNX1T1-248ENST00000613302 CENPBP07199 599 aaPredicted RBP13.17□□□□□ -0.3
RUNX1T1-248ENST00000613302 TRIM52Q96A61 297 aa13.16□□□□□ -0.3
RUNX1T1-248ENST00000613302 ESF1Q9H501 851 aaKnown RBP13.15□□□□□ -0.31
RUNX1T1-248ENST00000613302 FAM50AQ14320 339 aaKnown RBP13.14□□□□□ -0.31
RUNX1T1-248ENST00000613302 ZBTB7CA1YPR0 619 aa13.05□□□□□ -0.32
RUNX1T1-248ENST00000613302 STAG3Q9UJ98 1225 aa13.05□□□□□ -0.32
RUNX1T1-248ENST00000613302 CHGAP10645 457 aaKnown RBP13.03□□□□□ -0.32
RUNX1T1-248ENST00000613302 NEUROD1Q13562 356 aa13.01□□□□□ -0.33
RUNX1T1-248ENST00000613302 ZNF316A6NFI3 1004 aaPredicted RBP13□□□□□ -0.33
RUNX1T1-248ENST00000613302 ZBTB47Q9UFB7 747 aaPredicted RBP13□□□□□ -0.33
RUNX1T1-248ENST00000613302 ZNF777Q9ULD5 760 aaPredicted RBP12.98□□□□□ -0.33
RUNX1T1-248ENST00000613302 P3H3Q8IVL6 736 aa12.95□□□□□ -0.34
RUNX1T1-248ENST00000613302 ABCC9O60706 1549 aa12.92□□□□□ -0.34
RUNX1T1-248ENST00000613302 TULP1O00294 542 aaPredicted RBP12.89□□□□□ -0.35
RUNX1T1-248ENST00000613302 CANXP27824 592 aaKnown RBP12.88□□□□□ -0.35
RUNX1T1-248ENST00000613302 C14orf37Q86TY3 774 aa12.87□□□□□ -0.35
RUNX1T1-248ENST00000613302 NEFMP07197 916 aa12.84□□□□□ -0.35
RUNX1T1-248ENST00000613302 ARXQ96QS3 562 aa12.82□□□□□ -0.36
RUNX1T1-248ENST00000613302 NPM1P06748 294 aaKnown RBP eCLIP12.82□□□□□ -0.36
RUNX1T1-248ENST00000613302 TRHP20396 242 aaPredicted RBP12.81□□□□□ -0.36
RUNX1T1-248ENST00000613302 HAP1P54257 671 aaPredicted RBP12.81□□□□□ -0.36
RUNX1T1-248ENST00000613302 LOC105371045A0A1W2PR82 267 aa12.81□□□□□ -0.36
RUNX1T1-248ENST00000613302 NCBP3Q53F19 620 aaKnown RBP12.79□□□□□ -0.36
RUNX1T1-248ENST00000613302 ZEB1P37275 1124 aaPredicted RBP12.78□□□□□ -0.36
RUNX1T1-248ENST00000613302 ARID4BQ4LE39 1312 aaPredicted RBP12.77□□□□□ -0.37
RUNX1T1-248ENST00000613302 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.73□□□□□ -0.37
RUNX1T1-248ENST00000613302 NPM2Q86SE8 214 aaKnown RBP12.66□□□□□ -0.38
RUNX1T1-248ENST00000613302 NPHP1O15259 732 aa12.66□□□□□ -0.38
RUNX1T1-248ENST00000613302 LMOD2Q6P5Q4 547 aa12.65□□□□□ -0.38
RUNX1T1-248ENST00000613302 SALL2Q9Y467 1007 aaPredicted RBP12.64□□□□□ -0.39
RUNX1T1-248ENST00000613302 TAOK2Q9UL54 1235 aa12.63□□□□□ -0.39
RUNX1T1-248ENST00000613302 RTL5Q5HYW3 569 aaPredicted RBP12.6□□□□□ -0.39
RUNX1T1-248ENST00000613302 TRIM26Q12899 539 aaPredicted RBP12.56□□□□□ -0.4
RUNX1T1-248ENST00000613302 KCNH8Q96L42 1107 aa12.56□□□□□ -0.4
RUNX1T1-248ENST00000613302 PPP1R15AO75807 674 aaPredicted RBP12.54□□□□□ -0.4
RUNX1T1-248ENST00000613302 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.51□□□□□ -0.41
RUNX1T1-248ENST00000613302 AEBP2Q6ZN18 517 aaPredicted RBP12.51□□□□□ -0.41
RUNX1T1-248ENST00000613302 KDM2AQ9Y2K7 1162 aa12.47□□□□□ -0.41
RUNX1T1-248ENST00000613302 TPRNQ4KMQ1 711 aa12.46□□□□□ -0.41
RUNX1T1-248ENST00000613302 MLECQ14165 292 aa12.46□□□□□ -0.41
RUNX1T1-248ENST00000613302 HSP90AA1P07900 732 aaKnown RBP12.46□□□□□ -0.41
RUNX1T1-248ENST00000613302 CHIC2Q9UKJ5 165 aa12.45□□□□□ -0.42
RUNX1T1-248ENST00000613302 CDK11BP21127 795 aaKnown RBP12.44□□□□□ -0.42
RUNX1T1-248ENST00000613302 CDK11AQ9UQ88 783 aaPredicted RBP12.44□□□□□ -0.42
RUNX1T1-248ENST00000613302 AMER1Q5JTC6 1135 aaPredicted RBP12.43□□□□□ -0.42
RUNX1T1-248ENST00000613302 ANP32CO43423 234 aa12.43□□□□□ -0.42
RUNX1T1-248ENST00000613302 PPM1GO15355 546 aaPredicted RBP12.42□□□□□ -0.42
RUNX1T1-248ENST00000613302 SENP3-EIF4A1A0A087X0R7 540 aa12.4□□□□□ -0.42
RUNX1T1-248ENST00000613302 HRCP23327 699 aa12.39□□□□□ -0.43
RUNX1T1-248ENST00000613302 CHMP7Q8WUX9 453 aaPredicted RBP12.38□□□□□ -0.43
RUNX1T1-248ENST00000613302 SOX12O15370 315 aa12.38□□□□□ -0.43
RUNX1T1-248ENST00000613302 CCDC9Q9Y3X0 531 aaKnown RBP12.36□□□□□ -0.43
RUNX1T1-248ENST00000613302 CLSTN1O94985 981 aa12.36□□□□□ -0.43
RUNX1T1-248ENST00000613302 PHF23Q9BUL5 403 aaPredicted RBP12.35□□□□□ -0.43
RUNX1T1-248ENST00000613302 ISY1Q9ULR0 285 aaKnown RBP12.34□□□□□ -0.43
RUNX1T1-248ENST00000613302 TMC1Q8TDI8 760 aa12.34□□□□□ -0.43
RUNX1T1-248ENST00000613302 DIEXFQ68CQ4 756 aaKnown RBP12.31□□□□□ -0.44
RUNX1T1-248ENST00000613302 FAM9BQ8IZU0 186 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 138.9 ms