RNA–Protein interactions for RNA: ENST00000427173.1

LINC01741-201, Transcript of long intergenic non-protein coding RNA 1741, humanhuman

TSL 1 (best) BASIC

Gene LINC01741, Length 1,666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01741-201ENST00000427173 AEBP2Q6ZN18 517 aaPredicted RBP21.91■■□□□ 1.1
LINC01741-201ENST00000427173 CHIC1Q5VXU3 224 aa20.93■□□□□ 0.94
LINC01741-201ENST00000427173 SENP3Q9H4L4 574 aaPredicted RBP18.76■□□□□ 0.59
LINC01741-201ENST00000427173 PHF23Q9BUL5 403 aaPredicted RBP18.5■□□□□ 0.55
LINC01741-201ENST00000427173 FOXD1Q16676 465 aa17.43■□□□□ 0.38
LINC01741-201ENST00000427173 PLPPR3Q6T4P5 718 aa16.78■□□□□ 0.28
LINC01741-201ENST00000427173 MSH5O43196 834 aa16.36■□□□□ 0.21
LINC01741-201ENST00000427173 PIAS4Q8N2W9 510 aaPredicted RBP16.33■□□□□ 0.2
LINC01741-201ENST00000427173 PPP6R1Q9UPN7 881 aa16.31■□□□□ 0.2
LINC01741-201ENST00000427173 ADRA2BP18089 450 aa16.28■□□□□ 0.2
LINC01741-201ENST00000427173 POTEDQ86YR6 584 aa15.81■□□□□ 0.12
LINC01741-201ENST00000427173 SCAF1Q9H7N4 1312 aaKnown RBP14.99□□□□□ -0.01
LINC01741-201ENST00000427173 MAPK8IP2Q13387 824 aaPredicted RBP14.93□□□□□ -0.02
LINC01741-201ENST00000427173 DMRT2Q9Y5R5 561 aa14.87□□□□□ -0.03
LINC01741-201ENST00000427173 PPP4R3CPQ6ZMV5 832 aa14.69□□□□□ -0.06
LINC01741-201ENST00000427173 CNKSR2Q8WXI2 1034 aa14.42□□□□□ -0.1
LINC01741-201ENST00000427173 HOXD11P31277 338 aaPredicted RBP14.35□□□□□ -0.11
LINC01741-201ENST00000427173 RNF216Q9NWF9 866 aaPredicted RBP14.27□□□□□ -0.12
LINC01741-201ENST00000427173 DCAF8L1A6NGE4 600 aa14.26□□□□□ -0.13
LINC01741-201ENST00000427173 NISCHQ9Y2I1 1504 aa14.23□□□□□ -0.13
LINC01741-201ENST00000427173 NCBP3Q53F19 620 aaKnown RBP14.19□□□□□ -0.14
LINC01741-201ENST00000427173 CACNB1Q02641 598 aaPredicted RBP13.98□□□□□ -0.17
LINC01741-201ENST00000427173 NPM3O75607 178 aaKnown RBP13.92□□□□□ -0.18
LINC01741-201ENST00000427173 RNF39Q9H2S5 420 aa13.92□□□□□ -0.18
LINC01741-201ENST00000427173 DNAJC5BQ9UF47 199 aa13.89□□□□□ -0.19
LINC01741-201ENST00000427173 C1QBPQ07021 282 aaKnown RBP13.75□□□□□ -0.21
LINC01741-201ENST00000427173 KCNA4P22459 653 aa13.69□□□□□ -0.22
LINC01741-201ENST00000427173 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.69□□□□□ -0.22
LINC01741-201ENST00000427173 U3KPZ7 1027 aaPredicted RBP13.37□□□□□ -0.27
LINC01741-201ENST00000427173 SLC4A2P04920 1241 aa13.27□□□□□ -0.29
LINC01741-201ENST00000427173 CAPN15O75808 1086 aa13.16□□□□□ -0.3
LINC01741-201ENST00000427173 SPINK5Q9NQ38 1064 aaPredicted RBP13.15□□□□□ -0.31
LINC01741-201ENST00000427173 APLP2Q06481 763 aa13.11□□□□□ -0.31
LINC01741-201ENST00000427173 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.09□□□□□ -0.31
LINC01741-201ENST00000427173 HNRNPUL2Q1KMD3 747 aaKnown RBP13.09□□□□□ -0.31
LINC01741-201ENST00000427173 DSG3P32926 999 aa13.05□□□□□ -0.32
LINC01741-201ENST00000427173 SAMD1Q6SPF0 538 aaPredicted RBP13□□□□□ -0.33
LINC01741-201ENST00000427173 SLC4A1APQ9BWU0 796 aaKnown RBP12.97□□□□□ -0.33
LINC01741-201ENST00000427173 ZNF219Q9P2Y4 722 aaPredicted RBP12.97□□□□□ -0.33
LINC01741-201ENST00000427173 TRHP20396 242 aaPredicted RBP12.96□□□□□ -0.34
LINC01741-201ENST00000427173 MYCNP04198 464 aaPredicted RBP12.91□□□□□ -0.34
LINC01741-201ENST00000427173 ABCB7O75027 752 aa12.83□□□□□ -0.36
LINC01741-201ENST00000427173 FOXD4L1Q9NU39 408 aa12.8□□□□□ -0.36
LINC01741-201ENST00000427173 POLA2Q14181 598 aa12.62□□□□□ -0.39
LINC01741-201ENST00000427173 ZBTB22O15209 634 aa12.56□□□□□ -0.4
LINC01741-201ENST00000427173 ATF5Q9Y2D1 282 aaPredicted RBP12.54□□□□□ -0.4
LINC01741-201ENST00000427173 EHMT2Q96KQ7 1210 aa12.51□□□□□ -0.41
LINC01741-201ENST00000427173 RBM42Q9BTD8 480 aaKnown RBP12.51□□□□□ -0.41
LINC01741-201ENST00000427173 ATXN8OSP0DMR3 200 aa12.44□□□□□ -0.42
LINC01741-201ENST00000427173 ZBTB12Q9Y330 459 aaPredicted RBP12.43□□□□□ -0.42
LINC01741-201ENST00000427173 POTEHQ6S545 545 aa12.42□□□□□ -0.42
LINC01741-201ENST00000427173 CSRNP3Q8WYN3 585 aa12.32□□□□□ -0.44
LINC01741-201ENST00000427173 CCDC180Q9P1Z9 1646 aa12.26□□□□□ -0.45
LINC01741-201ENST00000427173 AKT1S1Q96B36 256 aa12.22□□□□□ -0.45
LINC01741-201ENST00000427173 OSCARQ8IYS5 282 aa12.19□□□□□ -0.46
LINC01741-201ENST00000427173 CHRDL2Q6WN34 429 aa12.16□□□□□ -0.46
LINC01741-201ENST00000427173 FBLN2P98095 1184 aa12.14□□□□□ -0.47
LINC01741-201ENST00000427173 REM2Q8IYK8 340 aaPredicted RBP12.07□□□□□ -0.48
LINC01741-201ENST00000427173 SPDYE2BA6NHP3 402 aa12.02□□□□□ -0.49
LINC01741-201ENST00000427173 SPDYE6P0CI01 402 aa12.02□□□□□ -0.49
LINC01741-201ENST00000427173 SPDYE2Q495Y8 402 aa12.02□□□□□ -0.49
LINC01741-201ENST00000427173 ZCCHC6Q5VYS8 1495 aaKnown RBP12.01□□□□□ -0.49
LINC01741-201ENST00000427173 MKRN4PQ13434 485 aaPredicted RBP11.97□□□□□ -0.49
LINC01741-201ENST00000427173 PITPNM1O00562 1244 aa11.94□□□□□ -0.5
LINC01741-201ENST00000427173 PIP4P2Q8N4L2 257 aa11.88□□□□□ -0.51
LINC01741-201ENST00000427173 ZNF692Q9BU19 519 aaPredicted RBP11.87□□□□□ -0.51
LINC01741-201ENST00000427173 SSUH2Q9Y2M2 353 aa11.84□□□□□ -0.51
LINC01741-201ENST00000427173 FXR2P51116 673 aaKnown RBP eCLIP11.84□□□□□ -0.51
LINC01741-201ENST00000427173 SPDYE1Q8NFV5 336 aaPredicted RBP11.81□□□□□ -0.52
LINC01741-201ENST00000427173 DCAF1Q9Y4B6 1507 aa11.77□□□□□ -0.52
LINC01741-201ENST00000427173 SHROOM4Q9ULL8 1493 aa11.76□□□□□ -0.53
LINC01741-201ENST00000427173 CLEC11AQ9Y240 323 aa11.75□□□□□ -0.53
LINC01741-201ENST00000427173 PABPN1Q86U42 306 aaKnown RBP eCLIP11.68□□□□□ -0.54
LINC01741-201ENST00000427173 HAX1O00165 279 aa11.67□□□□□ -0.54
LINC01741-201ENST00000427173 SP7Q8TDD2 431 aaPredicted RBP11.67□□□□□ -0.54
LINC01741-201ENST00000427173 PRKAR2AP13861 404 aaKnown RBP11.64□□□□□ -0.55
LINC01741-201ENST00000427173 DCAF8L2P0C7V8 631 aa11.63□□□□□ -0.55
LINC01741-201ENST00000427173 PRR29P0C7W0 189 aa11.59□□□□□ -0.55
LINC01741-201ENST00000427173 MYO15BQ96JP2 1530 aa11.53□□□□□ -0.56
LINC01741-201ENST00000427173 SPDYE4A6NLX3 237 aa11.49□□□□□ -0.57
LINC01741-201ENST00000427173 CHADLQ6NUI6 762 aa11.49□□□□□ -0.57
LINC01741-201ENST00000427173 EVX2Q03828 476 aa11.46□□□□□ -0.57
LINC01741-201ENST00000427173 C19orf67A6NJJ6 358 aa11.46□□□□□ -0.58
LINC01741-201ENST00000427173 SUPT5HO00267 1087 aaKnown RBP11.46□□□□□ -0.58
LINC01741-201ENST00000427173 STAG3Q9UJ98 1225 aa11.44□□□□□ -0.58
LINC01741-201ENST00000427173 ABCC9O60706 1549 aa11.37□□□□□ -0.59
LINC01741-201ENST00000427173 NACADO15069 1562 aa11.37□□□□□ -0.59
LINC01741-201ENST00000427173 FARP1Q9Y4F1 1045 aaPredicted RBP11.36□□□□□ -0.59
LINC01741-201ENST00000427173 SCRIBQ14160 1630 aa11.31□□□□□ -0.6
LINC01741-201ENST00000427173 CD44P16070 742 aaKnown RBP11.28□□□□□ -0.6
LINC01741-201ENST00000427173 CREBZFQ9NS37 354 aa11.28□□□□□ -0.6
LINC01741-201ENST00000427173 GABBR2O75899 941 aa11.26□□□□□ -0.61
LINC01741-201ENST00000427173 PROM2Q8N271 834 aa11.2□□□□□ -0.62
LINC01741-201ENST00000427173 CLCN6P51797 869 aa11.2□□□□□ -0.62
LINC01741-201ENST00000427173 RB1CC1Q8TDY2 1594 aa11.19□□□□□ -0.62
LINC01741-201ENST00000427173 FKBP8Q14318 412 aa11.17□□□□□ -0.62
LINC01741-201ENST00000427173 RSF1Q96T23 1441 aaPredicted RBP11.16□□□□□ -0.62
LINC01741-201ENST00000427173 NPM1P06748 294 aaKnown RBP eCLIP11.14□□□□□ -0.63
LINC01741-201ENST00000427173 ZRANB1Q9UGI0 708 aa11.14□□□□□ -0.63
LINC01741-201ENST00000427173 ZNF579Q8NAF0 562 aaKnown RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms