RNA–Protein interactions for RNA: ENST00000330891.9

BEST3-202, Transcript of bestrophin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene BEST3, Length 3,532 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-202ENST00000330891 NISCHQ9Y2I1 1504 aa14.17□□□□□ -0.14
BEST3-202ENST00000330891 CCDC180Q9P1Z9 1646 aa13.33□□□□□ -0.28
BEST3-202ENST00000330891 SHROOM4Q9ULL8 1493 aa12.71□□□□□ -0.37
BEST3-202ENST00000330891 MYO15BQ96JP2 1530 aa12.6□□□□□ -0.39
BEST3-202ENST00000330891 DCAF8L2P0C7V8 631 aa12.53□□□□□ -0.4
BEST3-202ENST00000330891 SUPT5HO00267 1087 aaKnown RBP12.5□□□□□ -0.41
BEST3-202ENST00000330891 DCAF1Q9Y4B6 1507 aa12.47□□□□□ -0.41
BEST3-202ENST00000330891 UNC13AQ9UPW8 1703 aa12.19□□□□□ -0.46
BEST3-202ENST00000330891 ZCCHC6Q5VYS8 1495 aaKnown RBP12.07□□□□□ -0.48
BEST3-202ENST00000330891 NACADO15069 1562 aa11.97□□□□□ -0.49
BEST3-202ENST00000330891 EHMT2Q96KQ7 1210 aa11.85□□□□□ -0.51
BEST3-202ENST00000330891 CHIC1Q5VXU3 224 aa11.85□□□□□ -0.51
BEST3-202ENST00000330891 BICRAQ9NZM4 1560 aa11.79□□□□□ -0.52
BEST3-202ENST00000330891 PCGF6Q9BYE7 350 aa11.79□□□□□ -0.52
BEST3-202ENST00000330891 LOC105371045A0A1W2PR82 267 aa11.79□□□□□ -0.52
BEST3-202ENST00000330891 RB1CC1Q8TDY2 1594 aa11.7□□□□□ -0.54
BEST3-202ENST00000330891 FAM9AQ8IZU1 332 aaPredicted RBP11.68□□□□□ -0.54
BEST3-202ENST00000330891 PPARGC1BQ86YN6 1023 aaKnown RBP11.65□□□□□ -0.54
BEST3-202ENST00000330891 PEG3Q9GZU2 1588 aa11.6□□□□□ -0.55
BEST3-202ENST00000330891 HRCP23327 699 aa11.51□□□□□ -0.57
BEST3-202ENST00000330891 TRIM41Q8WV44 630 aa11.43□□□□□ -0.58
BEST3-202ENST00000330891 TTBK1Q5TCY1 1321 aaPredicted RBP11.41□□□□□ -0.58
BEST3-202ENST00000330891 ABCC9O60706 1549 aa11.4□□□□□ -0.58
BEST3-202ENST00000330891 SCRIBQ14160 1630 aa11.37□□□□□ -0.59
BEST3-202ENST00000330891 PRDM2Q13029 1718 aa11.34□□□□□ -0.59
BEST3-202ENST00000330891 RSF1Q96T23 1441 aaPredicted RBP11.25□□□□□ -0.61
BEST3-202ENST00000330891 TRIM26Q12899 539 aaPredicted RBP11.25□□□□□ -0.61
BEST3-202ENST00000330891 SMARCA2P51531 1590 aa11.23□□□□□ -0.61
BEST3-202ENST00000330891 EIF4G1Q04637 1599 aaKnown RBP11.19□□□□□ -0.62
BEST3-202ENST00000330891 CECR2Q9BXF3 1484 aa11.19□□□□□ -0.62
BEST3-202ENST00000330891 HMGXB3Q12766 1538 aa11.16□□□□□ -0.62
BEST3-202ENST00000330891 PABPN1Q86U42 306 aaKnown RBP eCLIP11.15□□□□□ -0.62
BEST3-202ENST00000330891 RANGAP1P46060 587 aaPredicted RBP11.13□□□□□ -0.63
BEST3-202ENST00000330891 SMARCA4P51532 1647 aa11.11□□□□□ -0.63
BEST3-202ENST00000330891 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.1□□□□□ -0.63
BEST3-202ENST00000330891 MROH2BQ7Z745 1585 aa11.04□□□□□ -0.64
BEST3-202ENST00000330891 BAZ1AQ9NRL2 1556 aaPredicted RBP11.01□□□□□ -0.65
BEST3-202ENST00000330891 CCER1Q8TC90 406 aaPredicted RBP11□□□□□ -0.65
BEST3-202ENST00000330891 UBTFP17480 764 aaKnown RBP10.99□□□□□ -0.65
BEST3-202ENST00000330891 WIZO95785 1651 aa10.97□□□□□ -0.65
BEST3-202ENST00000330891 ABCC8Q09428 1581 aa10.88□□□□□ -0.67
BEST3-202ENST00000330891 CC2D2AQ9P2K1 1620 aa10.88□□□□□ -0.67
BEST3-202ENST00000330891 NCAPD3P42695 1498 aa10.88□□□□□ -0.67
BEST3-202ENST00000330891 ZEB1P37275 1124 aaPredicted RBP10.86□□□□□ -0.67
BEST3-202ENST00000330891 HNRNPUL2Q1KMD3 747 aaKnown RBP10.86□□□□□ -0.67
BEST3-202ENST00000330891 SOGA1O94964 1423 aa10.84□□□□□ -0.67
BEST3-202ENST00000330891 CCDC88BA6NC98 1476 aa10.84□□□□□ -0.67
BEST3-202ENST00000330891 WDR97A6NE52 1622 aa10.83□□□□□ -0.68
BEST3-202ENST00000330891 RUSC2Q8N2Y8 1516 aa10.81□□□□□ -0.68
BEST3-202ENST00000330891 TOP2AP11388 1531 aaKnown RBP10.8□□□□□ -0.68
BEST3-202ENST00000330891 CSRNP3Q8WYN3 585 aa10.79□□□□□ -0.68
BEST3-202ENST00000330891 YTHDC1Q96MU7 727 aaKnown RBP10.78□□□□□ -0.68
BEST3-202ENST00000330891 SCAF1Q9H7N4 1312 aaKnown RBP10.77□□□□□ -0.69
BEST3-202ENST00000330891 THOC2Q8NI27 1593 aaKnown RBP10.75□□□□□ -0.69
BEST3-202ENST00000330891 CEP162Q5TB80 1403 aa10.71□□□□□ -0.7
BEST3-202ENST00000330891 DIEXFQ68CQ4 756 aaKnown RBP10.71□□□□□ -0.7
BEST3-202ENST00000330891 ATAD2BQ9ULI0 1458 aa10.69□□□□□ -0.7
BEST3-202ENST00000330891 ITGAEP38570 1179 aa10.68□□□□□ -0.7
BEST3-202ENST00000330891 LAMC3Q9Y6N6 1575 aa10.68□□□□□ -0.7
BEST3-202ENST00000330891 NEUROD1Q13562 356 aa10.68□□□□□ -0.7
BEST3-202ENST00000330891 APLP2Q06481 763 aa10.67□□□□□ -0.7
BEST3-202ENST00000330891 BIVM-ERCC5R4GMW8 1640 aa10.65□□□□□ -0.7
BEST3-202ENST00000330891 ATP1B4Q9UN42 357 aaPredicted RBP10.6□□□□□ -0.71
BEST3-202ENST00000330891 GTF3C3Q9Y5Q9 886 aa10.6□□□□□ -0.71
BEST3-202ENST00000330891 WRNQ14191 1432 aaPredicted RBP eCLIP10.6□□□□□ -0.71
BEST3-202ENST00000330891 TNIKQ9UKE5 1360 aa10.57□□□□□ -0.72
BEST3-202ENST00000330891 WDR62O43379 1518 aa10.56□□□□□ -0.72
BEST3-202ENST00000330891 KIF21AQ7Z4S6 1674 aa10.56□□□□□ -0.72
BEST3-202ENST00000330891 ACIN1Q9UKV3 1341 aaKnown RBP10.55□□□□□ -0.72
BEST3-202ENST00000330891 PELP1Q8IZL8 1130 aaKnown RBP10.54□□□□□ -0.72
BEST3-202ENST00000330891 P3H3Q8IVL6 736 aa10.54□□□□□ -0.72
BEST3-202ENST00000330891 CENPBP07199 599 aaPredicted RBP10.53□□□□□ -0.72
BEST3-202ENST00000330891 MIER1Q8N108 512 aa10.53□□□□□ -0.72
BEST3-202ENST00000330891 CLIP1P30622 1438 aa10.52□□□□□ -0.72
BEST3-202ENST00000330891 ZNF316A6NFI3 1004 aaPredicted RBP10.52□□□□□ -0.73
BEST3-202ENST00000330891 KANK4Q5T7N3 995 aaPredicted RBP10.51□□□□□ -0.73
BEST3-202ENST00000330891 GOLGA3Q08378 1498 aa10.5□□□□□ -0.73
BEST3-202ENST00000330891 RAPGEF2Q9Y4G8 1499 aa10.5□□□□□ -0.73
BEST3-202ENST00000330891 BAZ1BQ9UIG0 1483 aaKnown RBP10.49□□□□□ -0.73
BEST3-202ENST00000330891 CFTRP13569 1480 aa10.47□□□□□ -0.73
BEST3-202ENST00000330891 SYNJ1O43426 1573 aa10.46□□□□□ -0.73
BEST3-202ENST00000330891 TARBP1Q13395 1621 aaKnown RBP10.46□□□□□ -0.73
BEST3-202ENST00000330891 CEP164Q9UPV0 1460 aa10.41□□□□□ -0.74
BEST3-202ENST00000330891 HIRIP3Q9BW71 556 aaPredicted RBP10.4□□□□□ -0.74
BEST3-202ENST00000330891 ABCA5Q8WWZ7 1642 aa10.4□□□□□ -0.74
BEST3-202ENST00000330891 EEA1Q15075 1411 aa10.39□□□□□ -0.75
BEST3-202ENST00000330891 FAM50AQ14320 339 aaKnown RBP10.39□□□□□ -0.75
BEST3-202ENST00000330891 VPS8Q8N3P4 1428 aa10.36□□□□□ -0.75
BEST3-202ENST00000330891 ARID3CA6NKF2 412 aa10.35□□□□□ -0.75
BEST3-202ENST00000330891 MYT1Q01538 1121 aa10.35□□□□□ -0.75
BEST3-202ENST00000330891 TOP2BQ02880 1626 aa10.34□□□□□ -0.75
BEST3-202ENST00000330891 KCNH8Q96L42 1107 aa10.32□□□□□ -0.76
BEST3-202ENST00000330891 SIN3AQ96ST3 1273 aa10.31□□□□□ -0.76
BEST3-202ENST00000330891 KIF21BO75037 1637 aa10.3□□□□□ -0.76
BEST3-202ENST00000330891 DNMBPQ6XZF7 1577 aa10.3□□□□□ -0.76
BEST3-202ENST00000330891 CUX2O14529 1486 aa10.3□□□□□ -0.76
BEST3-202ENST00000330891 SHROOM2Q13796 1616 aa10.29□□□□□ -0.76
BEST3-202ENST00000330891 PBRM1Q86U86 1689 aa10.28□□□□□ -0.76
BEST3-202ENST00000330891 ARAP1Q96P48 1450 aa10.27□□□□□ -0.77
BEST3-202ENST00000330891 BCANQ96GW7 911 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms