RNA–Protein interactions for RNA: ENST00000458167.6

GPN1-205, Transcript of GPN-loop GTPase 1, humanhuman

TSL 2 BASIC

Gene GPN1, Length 1,618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-205ENST00000458167 AEBP2Q6ZN18 517 aaPredicted RBP13.23□□□□□ -0.29
GPN1-205ENST00000458167 NISCHQ9Y2I1 1504 aa13.15□□□□□ -0.3
GPN1-205ENST00000458167 ABCC9O60706 1549 aa12.99□□□□□ -0.33
GPN1-205ENST00000458167 DNAJC5BQ9UF47 199 aa12.95□□□□□ -0.34
GPN1-205ENST00000458167 DNAJC5Q9H3Z4 198 aa12.51□□□□□ -0.41
GPN1-205ENST00000458167 CHIC1Q5VXU3 224 aa12.45□□□□□ -0.42
GPN1-205ENST00000458167 CCDC180Q9P1Z9 1646 aa12.28□□□□□ -0.44
GPN1-205ENST00000458167 RB1CC1Q8TDY2 1594 aa12.03□□□□□ -0.48
GPN1-205ENST00000458167 UNC13AQ9UPW8 1703 aa11.93□□□□□ -0.5
GPN1-205ENST00000458167 PABPN1Q86U42 306 aaKnown RBP eCLIP11.89□□□□□ -0.51
GPN1-205ENST00000458167 CECR2Q9BXF3 1484 aa11.79□□□□□ -0.52
GPN1-205ENST00000458167 BICRAQ9NZM4 1560 aa11.76□□□□□ -0.53
GPN1-205ENST00000458167 CC2D2AQ9P2K1 1620 aa11.76□□□□□ -0.53
GPN1-205ENST00000458167 NACADO15069 1562 aa11.73□□□□□ -0.53
GPN1-205ENST00000458167 CUX2O14529 1486 aa11.57□□□□□ -0.56
GPN1-205ENST00000458167 TRIM41Q8WV44 630 aa11.54□□□□□ -0.56
GPN1-205ENST00000458167 EIF4G1Q04637 1599 aaKnown RBP11.5□□□□□ -0.57
GPN1-205ENST00000458167 SHROOM4Q9ULL8 1493 aa11.46□□□□□ -0.57
GPN1-205ENST00000458167 DCAF8L2P0C7V8 631 aa11.31□□□□□ -0.6
GPN1-205ENST00000458167 MYO15BQ96JP2 1530 aa11.28□□□□□ -0.6
GPN1-205ENST00000458167 SENP3Q9H4L4 574 aaPredicted RBP11.27□□□□□ -0.6
GPN1-205ENST00000458167 ERCC6Q03468 1493 aa11.25□□□□□ -0.61
GPN1-205ENST00000458167 PHF23Q9BUL5 403 aaPredicted RBP11.13□□□□□ -0.63
GPN1-205ENST00000458167 THOC2Q8NI27 1593 aaKnown RBP11.07□□□□□ -0.64
GPN1-205ENST00000458167 SCRIBQ14160 1630 aa11.06□□□□□ -0.64
GPN1-205ENST00000458167 NESP48681 1621 aa10.94□□□□□ -0.66
GPN1-205ENST00000458167 BAZ1AQ9NRL2 1556 aaPredicted RBP10.94□□□□□ -0.66
GPN1-205ENST00000458167 RIMBP3CA6NJZ7 1639 aa10.92□□□□□ -0.66
GPN1-205ENST00000458167 RIMBP3BA6NNM3 1639 aa10.92□□□□□ -0.66
GPN1-205ENST00000458167 RIMBP3Q9UFD9 1639 aa10.92□□□□□ -0.66
GPN1-205ENST00000458167 KIF21AQ7Z4S6 1674 aa10.88□□□□□ -0.67
GPN1-205ENST00000458167 SMARCA2P51531 1590 aa10.86□□□□□ -0.67
GPN1-205ENST00000458167 ILDR1Q86SU0 546 aaPredicted RBP10.84□□□□□ -0.67
GPN1-205ENST00000458167 DCAF1Q9Y4B6 1507 aa10.82□□□□□ -0.68
GPN1-205ENST00000458167 OSCARQ8IYS5 282 aa10.81□□□□□ -0.68
GPN1-205ENST00000458167 NCAPD3P42695 1498 aa10.8□□□□□ -0.68
GPN1-205ENST00000458167 TRHP20396 242 aaPredicted RBP10.75□□□□□ -0.69
GPN1-205ENST00000458167 LAMC3Q9Y6N6 1575 aa10.75□□□□□ -0.69
GPN1-205ENST00000458167 ARHGEF11O15085 1522 aa10.75□□□□□ -0.69
GPN1-205ENST00000458167 ZCCHC6Q5VYS8 1495 aaKnown RBP10.72□□□□□ -0.69
GPN1-205ENST00000458167 HMGXB3Q12766 1538 aa10.69□□□□□ -0.7
GPN1-205ENST00000458167 WDR62O43379 1518 aa10.68□□□□□ -0.7
GPN1-205ENST00000458167 ATAD2BQ9ULI0 1458 aa10.65□□□□□ -0.7
GPN1-205ENST00000458167 MRC2Q9UBG0 1479 aa10.63□□□□□ -0.71
GPN1-205ENST00000458167 PDS5BQ9NTI5 1447 aa10.63□□□□□ -0.71
GPN1-205ENST00000458167 CYB5RLQ6IPT4 315 aa10.62□□□□□ -0.71
GPN1-205ENST00000458167 ARAP1Q96P48 1450 aa10.57□□□□□ -0.72
GPN1-205ENST00000458167 FOXD1Q16676 465 aa10.54□□□□□ -0.72
GPN1-205ENST00000458167 BAZ1BQ9UIG0 1483 aaKnown RBP10.49□□□□□ -0.73
GPN1-205ENST00000458167 SMARCA4P51532 1647 aa10.48□□□□□ -0.73
GPN1-205ENST00000458167 CHD1O14646 1710 aa10.42□□□□□ -0.74
GPN1-205ENST00000458167 CEP164Q9UPV0 1460 aa10.41□□□□□ -0.74
GPN1-205ENST00000458167 CADPSQ9ULU8 1353 aa10.4□□□□□ -0.74
GPN1-205ENST00000458167 PEG3Q9GZU2 1588 aa10.4□□□□□ -0.74
GPN1-205ENST00000458167 RSF1Q96T23 1441 aaPredicted RBP10.38□□□□□ -0.75
GPN1-205ENST00000458167 PELP1Q8IZL8 1130 aaKnown RBP10.36□□□□□ -0.75
GPN1-205ENST00000458167 POTEDQ86YR6 584 aa10.35□□□□□ -0.75
GPN1-205ENST00000458167 ZNF608Q9ULD9 1512 aaPredicted RBP10.33□□□□□ -0.76
GPN1-205ENST00000458167 URB2Q14146 1524 aaKnown RBP10.32□□□□□ -0.76
GPN1-205ENST00000458167 FANCD2Q9BXW9 1451 aa10.32□□□□□ -0.76
GPN1-205ENST00000458167 ERCC6L2Q5T890 1561 aa10.29□□□□□ -0.76
GPN1-205ENST00000458167 KDM4FA0A1W2PPD8 638 aa10.29□□□□□ -0.76
GPN1-205ENST00000458167 KIF13AQ9H1H9 1805 aa10.28□□□□□ -0.76
GPN1-205ENST00000458167 EIF4G3O43432 1585 aaKnown RBP10.28□□□□□ -0.76
GPN1-205ENST00000458167 HRCP23327 699 aa10.26□□□□□ -0.77
GPN1-205ENST00000458167 LMTK3Q96Q04 1460 aa10.25□□□□□ -0.77
GPN1-205ENST00000458167 FBXO41Q8TF61 875 aa10.22□□□□□ -0.77
GPN1-205ENST00000458167 IFT140Q96RY7 1462 aa10.22□□□□□ -0.77
GPN1-205ENST00000458167 HECW2Q9P2P5 1572 aa10.22□□□□□ -0.77
GPN1-205ENST00000458167 CLASP1Q7Z460 1538 aa10.21□□□□□ -0.77
GPN1-205ENST00000458167 SOCS7O14512 581 aa10.19□□□□□ -0.78
GPN1-205ENST00000458167 PRDM2Q13029 1718 aa10.15□□□□□ -0.78
GPN1-205ENST00000458167 CFTRP13569 1480 aa10.14□□□□□ -0.79
GPN1-205ENST00000458167 MROH2BQ7Z745 1585 aa10.12□□□□□ -0.79
GPN1-205ENST00000458167 ILDR2Q71H61 639 aa10.12□□□□□ -0.79
GPN1-205ENST00000458167 MYT1Q01538 1121 aa10.11□□□□□ -0.79
GPN1-205ENST00000458167 GAPVD1Q14C86 1478 aa10.11□□□□□ -0.79
GPN1-205ENST00000458167 FBLN2P98095 1184 aa10.11□□□□□ -0.79
GPN1-205ENST00000458167 SYNJ1O43426 1573 aa10.09□□□□□ -0.79
GPN1-205ENST00000458167 AQRO60306 1485 aaKnown RBP eCLIP10.09□□□□□ -0.79
GPN1-205ENST00000458167 TARBP1Q13395 1621 aaKnown RBP10.08□□□□□ -0.8
GPN1-205ENST00000458167 KDM6BO15054 1643 aa10.08□□□□□ -0.8
GPN1-205ENST00000458167 TOPBP1Q92547 1522 aa10.04□□□□□ -0.8
GPN1-205ENST00000458167 ADGRL1O94910 1474 aa10.04□□□□□ -0.8
GPN1-205ENST00000458167 SYNJ2O15056 1496 aa10.02□□□□□ -0.8
GPN1-205ENST00000458167 WIZO95785 1651 aa10.01□□□□□ -0.81
GPN1-205ENST00000458167 TSPOAP1O95153 1857 aa9.99□□□□□ -0.81
GPN1-205ENST00000458167 DISP3Q9P2K9 1392 aa9.97□□□□□ -0.81
GPN1-205ENST00000458167 SNAPC4Q5SXM2 1469 aa9.97□□□□□ -0.81
GPN1-205ENST00000458167 DNMBPQ6XZF7 1577 aa9.95□□□□□ -0.82
GPN1-205ENST00000458167 DIP2BQ9P265 1576 aa9.95□□□□□ -0.82
GPN1-205ENST00000458167 ABCC10Q5T3U5 1492 aa9.94□□□□□ -0.82
GPN1-205ENST00000458167 ABCC8Q09428 1581 aa9.93□□□□□ -0.82
GPN1-205ENST00000458167 PLPPR3Q6T4P5 718 aa9.92□□□□□ -0.82
GPN1-205ENST00000458167 MAGI1Q96QZ7 1491 aaPredicted RBP9.92□□□□□ -0.82
GPN1-205ENST00000458167 SPATA31D1Q6ZQQ2 1576 aa9.9□□□□□ -0.82
GPN1-205ENST00000458167 CHMP7Q8WUX9 453 aaPredicted RBP9.9□□□□□ -0.82
GPN1-205ENST00000458167 WDR97A6NE52 1622 aa9.9□□□□□ -0.82
GPN1-205ENST00000458167 FAM69CQ0P6D2 419 aa9.89□□□□□ -0.83
GPN1-205ENST00000458167 POLA1P09884 1462 aaPredicted RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms